Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN74274


BLASTX 7.6.2

Query= UN74274 /QuerySize=741
        (740 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q8VY91|RR6_ARATH 30S ribosomal protein S6 alpha, chloroplasti...    297   5e-080
sp|P82403|RR6_SPIOL 30S ribosomal protein S6 alpha, chloroplasti...    250   9e-066
sp|Q8R6M1|RS6_THETN 30S ribosomal protein S6 OS=Thermoanaerobact...     51   8e-006

>sp|Q8VY91|RR6_ARATH 30S ribosomal protein S6 alpha, chloroplastic
        OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1

          Length = 207

 Score =  297 bits (760), Expect = 5e-080
 Identities = 157/193 (81%), Positives = 164/193 (84%), Gaps = 10/193 (5%)
 Frame = -2

Query: 667 PSHSSLSPVPSGHSFPSPFASQQK------KKKRESSVVVKSQALDFSGTFFEGGFGSDD 506
           P+ SS   +   HS   PF S+ K      +K+  S  VVKSQALDFSGTFFEGGFGSDD
Sbjct:  16 PNVSSQPLLSFSHSL-RPFISKSKPMCASIQKRDGSQFVVKSQALDFSGTFFEGGFGSDD 74

Query: 505 D---PSPSSVSTALEDKPEPQCPPGFRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGG 335
           D   PS S VSTALEDKPEPQCPPG RQYETMAVLRPDMSEDERLGLTQKYEELLVAGGG
Sbjct:  75 DPTSPSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGG 134

Query: 334 MYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLESVLTADDDVI 155
           MYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESI PLE+VLTADDD+I
Sbjct: 135 MYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADDDII 194

Query: 154 RSSSFKIKKRKYN 116
           RSSSFKIKKRKYN
Sbjct: 195 RSSSFKIKKRKYN 207


 Score =  61 bits (147), Expect = 6e-009
 Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 4/48 (8%)
 Frame = -1

Query: 725 SSLCLSNSPVCPHSLPNVSSQPLLSFSRSLRPFVSKS--ICLAAEEEE 588
           SSLC+SNS +CP  LPNVSSQPLLSFS SLRPF+SKS  +C + ++ +
Sbjct:   3 SSLCVSNSTICP--LPNVSSQPLLSFSHSLRPFISKSKPMCASIQKRD 48

>sp|P82403|RR6_SPIOL 30S ribosomal protein S6 alpha, chloroplastic (Fragment)
        OS=Spinacia oleracea GN=RPS6 PE=1 SV=2

          Length = 168

 Score =  250 bits (637), Expect = 9e-066
 Identities = 123/152 (80%), Positives = 134/152 (88%), Gaps = 2/152 (1%)
 Frame = -2

Query: 568 VKSQALDFSGTFFEGGFG--SDDDPSPSSVSTALEDKPEPQCPPGFRQYETMAVLRPDMS 395
           VK+ ALDFSG+FFEGGFG   +D PS      A+E+KPEPQCPPG RQYETMAVLRPDM+
Sbjct:  17 VKAIALDFSGSFFEGGFGGLDEDPPSTPPAGLAVEEKPEPQCPPGLRQYETMAVLRPDMT 76

Query: 394 EDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYF 215
           EDERL LTQKYEELLVAGG MYVEVFNRGVIPLAYSI++KNKAGETN YLDGIYLLFTYF
Sbjct:  77 EDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYLLFTYF 136

Query: 214 TKPESITPLESVLTADDDVIRSSSFKIKKRKY 119
           TKPESI+PLE+ L  DDDVIRSSSFKI+KRKY
Sbjct: 137 TKPESISPLEAALVTDDDVIRSSSFKIRKRKY 168

>sp|Q8R6M1|RS6_THETN 30S ribosomal protein S6 OS=Thermoanaerobacter
        tengcongensis GN=rpsF PE=3 SV=1

          Length = 95

 Score =  51 bits (120), Expect = 8e-006
 Identities = 25/56 (44%), Positives = 36/56 (64%)
 Frame = -2

Query: 436 RQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNK 269
           R YETM VL PD++E+ER GL ++++ L+V  GG        G   LAY I+KK++
Sbjct:   2 RSYETMYVLSPDLNEEERKGLIERFKNLIVERGGEITNFDEWGKRKLAYPIQKKSE 57

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,214,008,525
Number of Sequences: 518415
Number of Extensions: 243214008525
Number of Successful Extensions: 1581329194
Number of sequences better than 0.0: 0