BLASTX 7.6.2
Query= UN74317 /QuerySize=737
(736 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9M9Y8|CRTSO_ARATH Carotenoid isomerase, chloroplastic OS=Ara... 220 1e-056
sp|Q8S4R4|CRTSO_SOLLC Carotenoid isomerase, chloroplastic OS=Sol... 181 7e-045
sp|Q2VEX9|CRTSO_DAUCA Carotenoid isomerase, chloroplastic OS=Dau... 179 2e-044
sp|Q52QW3|CRTS1_ONCHC Carotenoid isomerase 1, chloroplastic OS=O... 168 6e-041
sp|Q52QW2|CRTS2_ONCHC Carotenoid isomerase 2, chloroplastic OS=O... 168 6e-041
sp|P54980|CRTI_RHOS4 Phytoene dehydrogenase OS=Rhodobacter sphae... 51 8e-006
>sp|Q9M9Y8|CRTSO_ARATH Carotenoid isomerase, chloroplastic OS=Arabidopsis
thaliana GN=CRTISO PE=2 SV=2
Length = 595
Score = 220 bits (559), Expect = 1e-056
Identities = 127/184 (69%), Positives = 143/184 (77%), Gaps = 17/184 (9%)
Frame = +3
Query: 141 MNLCLHNPLTCVDRSSSFFSASKTSN-HKLGTLKLGF----LKHRKKN----HTVTVRSV 293
M+LC NP+ C DR FSA TS +KLGT LGF L++RKK VTV+SV
Sbjct: 1 MDLCFQNPVKCGDR---LFSALNTSTYYKLGTSNLGFNGPVLENRKKKKKLPRMVTVKSV 57
Query: 294 SSTSVEERTKKRDERSGGGGGEGQVYDAIVIGSGIGGLVAATQLSVKEAKVLVLEKYLIP 473
SS SV T + +R GG +YDAIVIGSGIGGLVAATQL+VKEA+VLVLEKYLIP
Sbjct: 58 SS-SVVASTVQGTKRDGG----ESLYDAIVIGSGIGGLVAATQLAVKEARVLVLEKYLIP 112
Query: 474 GGSSGYYEGDGYTFDVGSSVMFGFSDKGNLNLITHALKAVGREMEVIPDPTTVHFHLPDD 653
GGSSG+YE DGYTFDVGSSVMFGFSDKGNLNLIT ALKAVGR+MEVIPDPTTVHFHLP++
Sbjct: 113 GGSSGFYERDGYTFDVGSSVMFGFSDKGNLNLITQALKAVGRKMEVIPDPTTVHFHLPNN 172
Query: 654 LSVQ 665
LSV+
Sbjct: 173 LSVR 176
>sp|Q8S4R4|CRTSO_SOLLC Carotenoid isomerase, chloroplastic OS=Solanum
lycopersicum GN=CRTISO PE=2 SV=1
Length = 615
Score = 181 bits (457), Expect = 7e-045
Identities = 97/145 (66%), Positives = 109/145 (75%), Gaps = 3/145 (2%)
Frame = +3
Query: 288 SVSSTSVEERTKKRDERSGGG---GGEGQVYDAIVIGSGIGGLVAATQLSVKEAKVLVLE 458
+VS+ KR E G G E YDAIVIGSGIGGLVAATQL+VK AKVLVLE
Sbjct: 68 TVSNLKAVVDVDKRVESYGSSDVEGNESGSYDAIVIGSGIGGLVAATQLAVKGAKVLVLE 127
Query: 459 KYLIPGGSSGYYEGDGYTFDVGSSVMFGFSDKGNLNLITHALKAVGREMEVIPDPTTVHF 638
KY+IPGGSSG+YE DGY FDVGSSVMFGFSDKGNLNLIT AL AVGR++EVIPDPTTVHF
Sbjct: 128 KYVIPGGSSGFYERDGYKFDVGSSVMFGFSDKGNLNLITQALAAVGRKLEVIPDPTTVHF 187
Query: 639 HLPDDLSVQFIEGTMSSLTSLLASF 713
HLP+DLSV+ + L++ F
Sbjct: 188 HLPNDLSVRIHREYDDFIEELVSKF 212
>sp|Q2VEX9|CRTSO_DAUCA Carotenoid isomerase, chloroplastic OS=Daucus carota
GN=CRTISO PE=2 SV=1
Length = 615
Score = 179 bits (453), Expect = 2e-044
Identities = 98/145 (67%), Positives = 109/145 (75%), Gaps = 7/145 (4%)
Frame = +3
Query: 234 LKLGF--LKHRKKNHTVTVRSVSSTSVEERTKKRDERSGGGGGEGQVYDAIVIGSGIGGL 407
L GF + RK+ + SV S K+ + G G + YDAIVIGSGIGGL
Sbjct: 56 LNFGFCRVSRRKRKPNFVLNSVLSVD-----KELESDETVGLGRSREYDAIVIGSGIGGL 110
Query: 408 VAATQLSVKEAKVLVLEKYLIPGGSSGYYEGDGYTFDVGSSVMFGFSDKGNLNLITHALK 587
VAATQL+VK AKVLVLEKYLIPGGSSGYYE DG+TFDVGSSVMFGFSDKGNLNLIT AL
Sbjct: 111 VAATQLAVKGAKVLVLEKYLIPGGSSGYYERDGFTFDVGSSVMFGFSDKGNLNLITQALA 170
Query: 588 AVGREMEVIPDPTTVHFHLPDDLSV 662
AVG +MEVIPDP+TVHFHLP +LSV
Sbjct: 171 AVGCKMEVIPDPSTVHFHLPSNLSV 195
>sp|Q52QW3|CRTS1_ONCHC Carotenoid isomerase 1, chloroplastic OS=Oncidium hybrid
cultivar GN=CRTISO1 PE=2 SV=1
Length = 587
Score = 168 bits (423), Expect = 6e-041
Identities = 84/114 (73%), Positives = 98/114 (85%), Gaps = 5/114 (4%)
Frame = +3
Query: 339 SGGGGGEGQV-----YDAIVIGSGIGGLVAATQLSVKEAKVLVLEKYLIPGGSSGYYEGD 503
SG G G+V YDAIVIGSGIGGLVAATQL+VK A+VLVLEKY+IPGGSSG+++ D
Sbjct: 55 SGAGSEAGKVEEAEEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGFFQRD 114
Query: 504 GYTFDVGSSVMFGFSDKGNLNLITHALKAVGREMEVIPDPTTVHFHLPDDLSVQ 665
G+TFDVGSSVMFGFSDKGNLNLIT AL+AV ++ IPDPTTVHFHLPD+LS++
Sbjct: 115 GFTFDVGSSVMFGFSDKGNLNLITQALEAVDCKLRTIPDPTTVHFHLPDNLSIR 168
>sp|Q52QW2|CRTS2_ONCHC Carotenoid isomerase 2, chloroplastic OS=Oncidium hybrid
cultivar GN=CRTISO2 PE=2 SV=1
Length = 587
Score = 168 bits (423), Expect = 6e-041
Identities = 84/114 (73%), Positives = 98/114 (85%), Gaps = 5/114 (4%)
Frame = +3
Query: 339 SGGGGGEGQV-----YDAIVIGSGIGGLVAATQLSVKEAKVLVLEKYLIPGGSSGYYEGD 503
SG G G+V YDAIVIGSGIGGLVAATQL+VK A+VLVLEKY+IPGGSSG+++ D
Sbjct: 55 SGAGSEAGKVEEAEEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGFFQRD 114
Query: 504 GYTFDVGSSVMFGFSDKGNLNLITHALKAVGREMEVIPDPTTVHFHLPDDLSVQ 665
G+TFDVGSSVMFGFSDKGNLNLIT AL+AV ++ IPDPTTVHFHLPD+LS++
Sbjct: 115 GFTFDVGSSVMFGFSDKGNLNLITQALEAVDCKLRTIPDPTTVHFHLPDNLSIR 168
>sp|P54980|CRTI_RHOS4 Phytoene dehydrogenase OS=Rhodobacter sphaeroides (strain
ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=crtI PE=3 SV=2
Length = 518
Score = 51 bits (120), Expect = 8e-006
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +3
Query: 375 AIVIGSGIGGLVAATQLSVKEAKVLVLEKYLIPGGSSGYYEGDGYTFDVGSSVM 536
A+VIGSG+GGL AA +L K +V V++K +PGG +G+ FD+G +++
Sbjct: 13 ALVIGSGLGGLAAAMRLGAKGWRVTVIDKLDVPGGRGSSITQEGHRFDLGPTIV 66
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,214,008,525
Number of Sequences: 518415
Number of Extensions: 243214008525
Number of Successful Extensions: 1581329194
Number of sequences better than 0.0: 0
|