BLASTX 7.6.2
Query= UN74343 /QuerySize=599
(598 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297839423|ref|XP_002887593.1| protein binding protein [Arabid... 108 7e-022
gi|15222225|ref|NP_177673.1| RING/U-box domain-containing protei... 107 1e-021
gi|10120442|gb|AAG13067.1|AC023754_5 hypothetical protein [Arabi... 94 8e-018
gi|30686480|ref|NP_173398.2| RING/U-box domain-containing protei... 84 1e-014
gi|297844938|ref|XP_002890350.1| protein binding protein [Arabid... 84 1e-014
gi|255538744|ref|XP_002510437.1| ubiquitin-protein ligase, putat... 55 7e-006
>gi|297839423|ref|XP_002887593.1| protein binding protein [Arabidopsis lyrata
subsp. lyrata]
Length = 455
Score = 108 bits (268), Expect = 7e-022
Identities = 56/69 (81%), Positives = 60/69 (86%), Gaps = 2/69 (2%)
Frame = +3
Query: 366 GKGVKMEPSSSSKGPS-KSFLKWHFASLSSKWSNSRSSKDSALKKGFWSRHRNNRSSSSI 542
GK +K+E S SSK S KSFLKWHFAS+SSKW N SSKDSALKKGFWSRHRNN+SSSSI
Sbjct: 388 GKALKLEASCSSKSSSNKSFLKWHFASISSKW-NKPSSKDSALKKGFWSRHRNNQSSSSI 446
Query: 543 EGLNQTSQL 569
EGLNQTSQL
Sbjct: 447 EGLNQTSQL 455
Score = 82 bits (200), Expect = 6e-014
Identities = 48/70 (68%), Positives = 53/70 (75%), Gaps = 10/70 (14%)
Frame = +1
Query: 166 KDRKVPPPPSSSSGHHAPAVSGASLHRNSACSPQWSFRRDNNRRRVADEIEDSPFYVVGG 345
KDRKVPP SSG PA AS+HRNSACSPQWSFRRD NRRRVADEIE SP+Y
Sbjct: 10 KDRKVPP----SSG---PA--SASVHRNSACSPQWSFRRD-NRRRVADEIEGSPYYSPYV 59
Query: 346 RSRGLSMEKV 375
SRG+SM+K+
Sbjct: 60 ASRGISMDKM 69
>gi|15222225|ref|NP_177673.1| RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 455
Score = 107 bits (266), Expect = 1e-021
Identities = 56/69 (81%), Positives = 59/69 (85%), Gaps = 2/69 (2%)
Frame = +3
Query: 366 GKGVKMEPSSSSKGPS-KSFLKWHFASLSSKWSNSRSSKDSALKKGFWSRHRNNRSSSSI 542
GK +K+E S SSK S KSFLKWHFAS+SSKW N SSKDSALKKGFWSRHRNNRSSSSI
Sbjct: 388 GKALKLEASCSSKSSSNKSFLKWHFASISSKW-NKPSSKDSALKKGFWSRHRNNRSSSSI 446
Query: 543 EGLNQTSQL 569
EGLNQTS L
Sbjct: 447 EGLNQTSPL 455
Score = 72 bits (176), Expect = 3e-011
Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +1
Query: 226 SGASLHRNSACSPQWSFRRDNNRRRVADEIEDSPFYVVGGRSRGLSMEKV 375
+ +S+HRNSACSPQWSFRRD NRRRVADEIE SP+Y SRG+SM+K+
Sbjct: 21 ASSSVHRNSACSPQWSFRRD-NRRRVADEIEGSPYYSPYVASRGISMDKM 69
>gi|10120442|gb|AAG13067.1|AC023754_5 hypothetical protein [Arabidopsis
thaliana]
Length = 435
Score = 94 bits (233), Expect = 8e-018
Identities = 49/61 (80%), Positives = 52/61 (85%), Gaps = 2/61 (3%)
Frame = +3
Query: 366 GKGVKMEPSSSSKGPS-KSFLKWHFASLSSKWSNSRSSKDSALKKGFWSRHRNNRSSSSI 542
GK +K+E S SSK S KSFLKWHFAS+SSKW N SSKDSALKKGFWSRHRNNRSSSSI
Sbjct: 366 GKALKLEASCSSKSSSNKSFLKWHFASISSKW-NKPSSKDSALKKGFWSRHRNNRSSSSI 424
Query: 543 E 545
E
Sbjct: 425 E 425
>gi|30686480|ref|NP_173398.2| RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 444
Score = 84 bits (206), Expect = 1e-014
Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 7/70 (10%)
Frame = +3
Query: 366 GKGVKMEPSSSSKG-PSKSFLKWHFASLSSKWSNSRSSKDSALKKGFWSRHRNNR---SS 533
GKG+KM+PSS++KG SKSF+KWHF S+S+KWS +R DS KK FWSRH N R S
Sbjct: 378 GKGLKMDPSSNTKGSTSKSFMKWHFGSVSTKWSKAR---DSTSKKSFWSRHSNKRLSHSF 434
Query: 534 SSIEGLNQTS 563
SS+EGLNQ +
Sbjct: 435 SSVEGLNQAT 444
>gi|297844938|ref|XP_002890350.1| protein binding protein [Arabidopsis lyrata
subsp. lyrata]
Length = 434
Score = 84 bits (205), Expect = 1e-014
Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 7/70 (10%)
Frame = +3
Query: 366 GKGVKMEPSSSSKG-PSKSFLKWHFASLSSKWSNSRSSKDSALKKGFWSRHRNNR---SS 533
GKG+K++PSSS+KG SKSF+KWHF S+S+KWS R DS KK FW RH N R +S
Sbjct: 368 GKGLKIDPSSSTKGSTSKSFMKWHFGSVSAKWSKVR---DSTSKKSFWPRHSNKRLSHTS 424
Query: 534 SSIEGLNQTS 563
SS+EGLNQT+
Sbjct: 425 SSVEGLNQTT 434
>gi|255538744|ref|XP_002510437.1| ubiquitin-protein ligase, putative [Ricinus
communis]
Length = 439
Score = 55 bits (130), Expect = 7e-006
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 229 GASLHRNSACSPQWSFRRDNNRRRVADEIEDSPFYVVGGRSRGLSME 369
G +LHRN+ CSP WSFR + NRRRVA EIEDS + G SR +S+E
Sbjct: 20 GNTLHRNARCSPTWSFRWE-NRRRVAGEIEDSLYQTSHGLSRDVSVE 65
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 798,366,029,682
Number of Sequences: 15229318
Number of Extensions: 798366029682
Number of Successful Extensions: 240520672
Number of sequences better than 0.0: 0
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