BLASTX 7.6.2
Query= UN74540 /QuerySize=788
(787 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9VDV3|NUPL1_DROME Probable nucleoporin Nup58 OS=Drosophila m... 80 1e-014
>sp|Q9VDV3|NUPL1_DROME Probable nucleoporin Nup58 OS=Drosophila melanogaster
GN=Nup58 PE=1 SV=1
Length = 546
Score = 80 bits (197), Expect = 1e-014
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Frame = +1
Query: 1 AFGTPSSTPMFGSSST--PAFGTPPPS-MFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTP 171
AFG P+STP FG++ST PAFGT + FG P++T AFG P++TPAFG ++TPAFG P
Sbjct: 72 AFGAPASTPGFGATSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPAFGAP 131
Query: 172 STSSFASGGFGTSLFSTPFSSQ---QPQQQQQQQQTSPFQQQPAASSGFGFQSPFNTAQQ 342
+ + TS F P ++ P Q +P + F F +P +A
Sbjct: 132 AATPAFGAPAATSAFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPT 191
Query: 343 T 345
T
Sbjct: 192 T 192
Score = 77 bits (188), Expect = 1e-013
Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Frame = +1
Query: 10 TPSSTPMFG-SSSTPAFGTP-PPSMFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSTSS 183
T ++ P FG +++TPAFG P S FG P++TPAFG ++TPAFG P++TPAFG P+
Sbjct: 85 TSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPAFGAPAATPAFGAPA--- 141
Query: 184 FASGGFGTSLFSTPFSSQQPQQQQQQQQTSPFQQQPAASSGFGFQSPFNTAQQTPQL--- 354
A+ FG +T F + P Q +P + F F +P +A T
Sbjct: 142 -ATSAFGAPAATTAFGA--PASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFG 198
Query: 355 --TTQMAPVAPIPFSLA 399
TT A +P SL+
Sbjct: 199 FGTTATTAAAAMPASLS 215
Score = 76 bits (186), Expect = 2e-013
Identities = 56/144 (38%), Positives = 71/144 (49%), Gaps = 19/144 (13%)
Frame = +1
Query: 10 TPSSTPMFG-SSSTPAFGTPP--PSMFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSTS 180
T + P FG ++STP FG P S+F P++TPAFG P++TPAFG P+STP FG ST+
Sbjct: 29 TTAPPPSFGAATSTPTFGAAPATTSLFAAPAATPAFGAPAATPAFGAPASTPGFGATSTA 88
Query: 181 SFASG------GFG----TSLFSTP-----FSSQQPQQQQQQQQTSPFQQQPAASSGFGF 315
+ A G FG TS F P F + +P PAA+S FG
Sbjct: 89 APAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPAFGAPAATPAFGAPAATSAFGA 148
Query: 316 QSPFNTAQQTPQLTTQMAPVAPIP 387
+ TA P T A AP P
Sbjct: 149 PAA-TTAFGAPASTQASAFGAPAP 171
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,066,761,093
Number of Sequences: 518415
Number of Extensions: 246066761093
Number of Successful Extensions: 1592770963
Number of sequences better than 0.0: 0
|