BLASTX 7.6.2
Query= UN74540 /QuerySize=788
(787 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G24310.1 | Symbols: | unknown protein | chr1:... 252 2e-067
TAIR9_protein||AT1G10390.1 | Symbols: | nucleoporin family prot... 65 4e-011
TAIR9_protein||AT1G10390.2 | Symbols: | nucleoporin family prot... 65 4e-011
TAIR9_protein||AT1G59660.1 | Symbols: | nucleoporin family prot... 60 2e-009
>TAIR9_protein||AT1G24310.1 | Symbols: | unknown protein | chr1:8624192-8626179
FORWARD
Length = 378
Score = 252 bits (642), Expect = 2e-067
Identities = 160/264 (60%), Positives = 180/264 (68%), Gaps = 32/264 (12%)
Frame = +1
Query: 55 FGTPPPS-MFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSTSSFASGGFGTSLFSTPFS 231
FGTP S FGTPSSTPAFGT S+PAFGTPS+TPAFGTPS SF+SGGFG+SLFS+PFS
Sbjct: 2 FGTPSSSPSFGTPSSTPAFGT--SSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFS 59
Query: 232 SQQPQQQQQQQQ----TSPFQQQPAASSGFGFQSPFNTA----QQTP----QLTTQMAPV 375
SQQPQQQQQQQQ +S FQQQP SS FGFQSPFN QQTP QLTTQMAPV
Sbjct: 60 SQQPQQQQQQQQQQQPSSLFQQQP--SSNFGFQSPFNNTAQQQQQTPFPNAQLTTQMAPV 117
Query: 376 APIPFSLADRDIQAIVEAYKEDPTNPKYAFKHLLFSVTEQQFRVKPAAVSDIMG------ 537
APIP+SLADRD+QAI+EAYKEDPTNPKYAF+HLLFSVTE Q+RVKPAAVSDIM
Sbjct: 118 APIPYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPAAVSDIMWAEAMSK 177
Query: 538 -*GHEQT*RHGFIRKRAPLASACARF*RSFSAPSATR*SSRIR*GKNKTTQSNVKCFRDT 714
G + T R R L + S R R KTTQSNVK +
Sbjct: 178 LEGMDSTERE---RLWPQLVQGFKDLSQRLKLQDEVLVSDRDR---IKTTQSNVKMLQRH 231
Query: 715 CKHTPF-HLLKIRQKSRS-SRRML 780
+ + F + ++RQK +S RRML
Sbjct: 232 LQASTFPSIERLRQKEQSLQRRML 255
Score = 140 bits (351), Expect = 1e-033
Identities = 77/104 (74%), Positives = 84/104 (80%), Gaps = 14/104 (13%)
Frame = +1
Query: 76 MFGTPSSTPAFGTPSST-------PAFGTPSSTPAFGTPSTSSFASGGFGTSLFSTPFSS 234
MFGTPSS+P+FGTPSST PAFGTPS+TPAFGTPS SF+SGGFG+SLFS+PFSS
Sbjct: 1 MFGTPSSSPSFGTPSSTPAFGTSSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFSS 60
Query: 235 QQPQQQQQQQQ----TSPFQQQPAASSGFGFQSPF-NTAQQTPQ 351
QQPQQQQQQQQ +S FQQQP SS FGFQSPF NTAQQ Q
Sbjct: 61 QQPQQQQQQQQQQQPSSLFQQQP--SSNFGFQSPFNNTAQQQQQ 102
Score = 96 bits (238), Expect = 2e-020
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 533 WAEAMSKLEGMDSSERERLWPQLVQGFKDLSQRLQLQDEVLVSDRERIK 679
WAEAMSKLEGMDS+ERERLWPQLVQGFKDLSQRL+LQDEVLVSDR+RIK
Sbjct: 171 WAEAMSKLEGMDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIK 219
>TAIR9_protein||AT1G10390.1 | Symbols: | nucleoporin family protein |
chr1:3407265-3412045 REVERSE
Length = 1042
Score = 65 bits (157), Expect = 4e-011
Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 13/87 (14%)
Frame = +1
Query: 1 AFGTPSSTPMFGSSSTPAFGTPPPSMFGTPSSTPAFGTPSSTPAFGTPS-------STPA 159
AFG S TP FG+SSTPAFG FG SSTPAFG SSTP+FG + S+PA
Sbjct: 243 AFGA-SGTPAFGASSTPAFGASSTPAFGA-SSTPAFG-GSSTPSFGASNTSSFSFGSSPA 299
Query: 160 FGTPSTSSFASGGFGTSLFSTPFSSQQ 240
FG STS+F S FG++ +PF Q
Sbjct: 300 FG-QSTSAFGSSAFGST--PSPFGGAQ 323
Score = 50 bits (118), Expect = 1e-006
Identities = 46/136 (33%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Frame = +1
Query: 7 GTPSSTPMFGSSSTPAFGTPPPSMFGTPSSTPAFGTPSSTPAFGT---PSSTPAFGTPST 177
G+ ++T +FGSSS AFGT PS SSTP FG SS+ FG+ +TPAFG
Sbjct: 483 GSSTTTSVFGSSS--AFGTTTPSPLFGSSSTPGFG--SSSSIFGSAPGQGATPAFGNSQP 538
Query: 178 SSFASGGFGTSLFSTPFSSQQPQQQQQQQQTSPFQQQPA----ASSGFG----FQSPFNT 333
S+ + T + F Q Q ++P Q + S+GFG S T
Sbjct: 539 STLFNSTPSTGQTGSAFGQTGSAFGQFGQSSAPAFGQNSIFNKPSTGFGNMFSSSSTLTT 598
Query: 334 AQQTPQLTTQMAPVAP 381
+ +P T A V P
Sbjct: 599 SSSSPFGQTMPAGVTP 614
Score = 49 bits (116), Expect = 2e-006
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +1
Query: 1 AFGTPSSTPMFGSSSTPAFGTPPPSMFGT---PSSTPAFGTPSSTPAFGTPSSTPAFGTP 171
AFGT + +P+FGSSSTP FG+ S+FG+ +TPAFG + F + ST G+
Sbjct: 496 AFGTTTPSPLFGSSSTPGFGS-SSSIFGSAPGQGATPAFGNSQPSTLFNSTPSTGQTGSA 554
Query: 172 -STSSFASGGFGTS 210
+ A G FG S
Sbjct: 555 FGQTGSAFGQFGQS 568
Score = 48 bits (113), Expect = 5e-006
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Frame = +1
Query: 16 SSTPMFGSSSTPAFGTPPPSMFGTPSSTP---AFGTPSSTPAFGTPSSTPAFGTPSTSS- 183
+STP FG+SS+PAFG P+ +P+S+P + G F TP S P FG + S
Sbjct: 74 ASTPTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQSNP-FGNSTQQSQ 132
Query: 184 --FASGGFGTSLFSTPFSS 234
F + FG+ STPF +
Sbjct: 133 PAFGNTSFGS---STPFGA 148
>TAIR9_protein||AT1G10390.2 | Symbols: | nucleoporin family protein |
chr1:3407265-3412045 REVERSE
Length = 1042
Score = 65 bits (157), Expect = 4e-011
Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 13/87 (14%)
Frame = +1
Query: 1 AFGTPSSTPMFGSSSTPAFGTPPPSMFGTPSSTPAFGTPSSTPAFGTPS-------STPA 159
AFG S TP FG+SSTPAFG FG SSTPAFG SSTP+FG + S+PA
Sbjct: 243 AFGA-SGTPAFGASSTPAFGASSTPAFGA-SSTPAFG-GSSTPSFGASNTSSFSFGSSPA 299
Query: 160 FGTPSTSSFASGGFGTSLFSTPFSSQQ 240
FG STS+F S FG++ +PF Q
Sbjct: 300 FG-QSTSAFGSSAFGST--PSPFGGAQ 323
Score = 50 bits (118), Expect = 1e-006
Identities = 46/136 (33%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Frame = +1
Query: 7 GTPSSTPMFGSSSTPAFGTPPPSMFGTPSSTPAFGTPSSTPAFGT---PSSTPAFGTPST 177
G+ ++T +FGSSS AFGT PS SSTP FG SS+ FG+ +TPAFG
Sbjct: 483 GSSTTTSVFGSSS--AFGTTTPSPLFGSSSTPGFG--SSSSIFGSAPGQGATPAFGNSQP 538
Query: 178 SSFASGGFGTSLFSTPFSSQQPQQQQQQQQTSPFQQQPA----ASSGFG----FQSPFNT 333
S+ + T + F Q Q ++P Q + S+GFG S T
Sbjct: 539 STLFNSTPSTGQTGSAFGQTGSAFGQFGQSSAPAFGQNSIFNKPSTGFGNMFSSSSTLTT 598
Query: 334 AQQTPQLTTQMAPVAP 381
+ +P T A V P
Sbjct: 599 SSSSPFGQTMPAGVTP 614
Score = 49 bits (116), Expect = 2e-006
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +1
Query: 1 AFGTPSSTPMFGSSSTPAFGTPPPSMFGT---PSSTPAFGTPSSTPAFGTPSSTPAFGTP 171
AFGT + +P+FGSSSTP FG+ S+FG+ +TPAFG + F + ST G+
Sbjct: 496 AFGTTTPSPLFGSSSTPGFGS-SSSIFGSAPGQGATPAFGNSQPSTLFNSTPSTGQTGSA 554
Query: 172 -STSSFASGGFGTS 210
+ A G FG S
Sbjct: 555 FGQTGSAFGQFGQS 568
Score = 48 bits (113), Expect = 5e-006
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Frame = +1
Query: 16 SSTPMFGSSSTPAFGTPPPSMFGTPSSTP---AFGTPSSTPAFGTPSSTPAFGTPSTSS- 183
+STP FG+SS+PAFG P+ +P+S+P + G F TP S P FG + S
Sbjct: 74 ASTPTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQSNP-FGNSTQQSQ 132
Query: 184 --FASGGFGTSLFSTPFSS 234
F + FG+ STPF +
Sbjct: 133 PAFGNTSFGS---STPFGA 148
>TAIR9_protein||AT1G59660.1 | Symbols: | nucleoporin family protein |
chr1:21924693-21929233 FORWARD
Length = 998
Score = 60 bits (143), Expect = 2e-009
Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Frame = +1
Query: 1 AFGTPSSTPMFGSSSTPAFGTPPPSMFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSTS 180
AFG SSTP+FGSSS+PAFG P FG+ + T SS AFG+ SSTP FG +TS
Sbjct: 211 AFGA-SSTPLFGSSSSPAFGASPAPAFGSSGNAFGNNTFSSGGAFGS-SSTPTFGASNTS 268
Query: 181 SFA-----SGGFGTS 210
+F S FG+S
Sbjct: 269 AFGASSSPSFNFGSS 283
Score = 59 bits (141), Expect = 3e-009
Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 12/114 (10%)
Frame = +1
Query: 16 SSTPMFGSSSTPAFGTPPPSMFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSTSSFASG 195
SSTP FGS++TPAFG +FG+ SS+PAFG S PAFG SS AFG ++F+SG
Sbjct: 199 SSTPAFGSTNTPAFGASSTPLFGS-SSSPAFGA-SPAPAFG--SSGNAFG---NNTFSSG 251
Query: 196 G-FGTSLFSTPFSSQQPQQQQQQQQTSPFQQQPA---ASSGFGFQSPFNTAQQT 345
G FG+S T +S + F PA ++S FG S F + Q +
Sbjct: 252 GAFGSSSTPTFGASNTSAFGASSSPSFNFGSSPAFGQSTSAFG-SSSFGSTQSS 304
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,317,164,518
Number of Sequences: 33410
Number of Extensions: 32317164518
Number of Successful Extensions: 1077284922
Number of sequences better than 0.0: 0
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