BLASTX 7.6.2
Query= UN74558 /QuerySize=486
(485 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G32900.1 | Symbols: ATZW10 | ATZW10 | chr2:139... 218 2e-057
TAIR9_protein||AT4G37450.1 | Symbols: AGP18, ATAGP18 | AGP18 (AR... 49 2e-006
TAIR9_protein||AT4G35800.1 | Symbols: NRPB1, RPB1, RNA_POL_II_LS... 47 5e-006
TAIR9_protein||AT1G31810.1 | Symbols: | actin binding | chr1:11... 46 9e-006
>TAIR9_protein||AT2G32900.1 | Symbols: ATZW10 | ATZW10 | chr2:13953807-13957470
FORWARD
Length = 743
Score = 218 bits (554), Expect = 2e-057
Identities = 111/137 (81%), Positives = 126/137 (91%), Gaps = 1/137 (0%)
Frame = +2
Query: 74 MSEIDALFESINVRDLLSGHDLNDPTTPLSAPDLRLLINRLDSHSLRIKSKVQSYLISHR 253
M EIDALFESINVRDLL+GHDLNDPTTPLSAPDLRLLINRL+SHSLRIKSKVQSYL++H
Sbjct: 1 MPEIDALFESINVRDLLAGHDLNDPTTPLSAPDLRLLINRLESHSLRIKSKVQSYLVAHH 60
Query: 254 SEFSHLFSTCQDAVSRTRLISDDVSDVVKLVSDGSVDVVEIREVVDEIREKTREVRVKRE 433
S+FS LFS CQD VSRTRLISDDVSDV++LVSD +D VEIR VVDEI EKT+EV++KRE
Sbjct: 61 SDFSELFSLCQDTVSRTRLISDDVSDVLQLVSDRPID-VEIRSVVDEITEKTKEVKLKRE 119
Query: 434 SLGLVSAVVGVCEALRE 484
SL LV+A+VG+CEAL+E
Sbjct: 120 SLDLVNAIVGICEALQE 136
>TAIR9_protein||AT4G37450.1 | Symbols: AGP18, ATAGP18 | AGP18 (ARABINOGALACTAN
PROTEIN 18) | chr4:17605926-17606734 REVERSE
Length = 210
Score = 49 bits (114), Expect = 2e-006
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +3
Query: 213 GSSPKSSPTSSPTAPSSPTFSP---PAKT-PSPGPA*SPTTSPMS*NWSPTVPSTLS 371
G SP SSPT SPT PS+PT SP PA T P+ PA +PT S S SP P+ +S
Sbjct: 21 GQSPISSPTKSPTTPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPAPVS 77
>TAIR9_protein||AT4G35800.1 | Symbols: NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS,
RNA_POL_II_LS | NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding /
DNA-directed RNA polymerase | chr4:16961115-16967892 REVERSE
Length = 1841
Score = 47 bits (110), Expect = 5e-006
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Frame = +3
Query: 18 SETAIAAPTSSSSSTVPPPCRRSTRYSNRSTSETFSPDTISTIRRLHYQLPISVSS*TV* 197
S T+ A +S S + P T S TS ++SP + S P S
Sbjct: 1651 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS------- 1703
Query: 198 TPTPSGSSPKSSPTSSPTAPSSPTFSPPAKTPSPGPA*SPTT---------SPMS*NWSP 350
P S +SP SPTS P+SP+++P + SP A SP+ SP S N+SP
Sbjct: 1704 -PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 1762
Query: 351 TVPS 362
T PS
Sbjct: 1763 TSPS 1766
Score = 47 bits (110), Expect = 5e-006
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Frame = +3
Query: 198 TPTPSGSSPKS---SPTSSPTAPSSPTFSPPAKTPSP-GPA*SPTT---SPMS*NWSPTV 356
+PT G SP S SPTS +P+SPT+SP + SP PA SPT+ SP S ++SPT
Sbjct: 1553 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTS 1612
Query: 357 PS 362
PS
Sbjct: 1613 PS 1614
>TAIR9_protein||AT1G31810.1 | Symbols: | actin binding | chr1:11399922-11405761
REVERSE
Length = 1231
Score = 46 bits (108), Expect = 9e-006
Identities = 38/114 (33%), Positives = 45/114 (39%), Gaps = 21/114 (18%)
Frame = +1
Query: 13 SSRKLPSP--PPHPPPPPPSLRHVGDRRVIRIDQRPRPSLRTR-------------SQRS 147
SSR +PSP PP PPPPPPS G++R + P P TR S
Sbjct: 630 SSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPPPPPPPTRIPAAKCAPPPPPPPPTS 689
Query: 148 DDSTISSRSPSPHKPSRLPLPPDQVQSPVLPHLPPLRVLPPFLHLPRRRLQDPP 309
+I PS P P P + + P PP LPP RL PP
Sbjct: 690 HSGSIRVGPPSTPPPPPPPPPKANISNAPKPPAPP--PLPP----SSTRLGAPP 737
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,317,164,518
Number of Sequences: 33410
Number of Extensions: 32317164518
Number of Successful Extensions: 1077284922
Number of sequences better than 0.0: 0
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