BLASTX 7.6.2
Query= UN74592 /QuerySize=649
(648 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding... 179 2e-045
TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding... 179 2e-045
TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING... 63 1e-010
>TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 179 bits (452), Expect = 2e-045
Identities = 112/183 (61%), Positives = 127/183 (69%), Gaps = 27/183 (14%)
Frame = +3
Query: 12 KVVARVLSRFRPKEVRRREQHHSRR----RAIRQDTTTTR----DFLCEKLRLISPYTEE 167
++VARVLSRFRPKEV+RRE + SRR R IRQ+TTTT D LCEKLR I+ YT E
Sbjct: 170 EIVARVLSRFRPKEVKRREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEKLRSINLYTNE 229
Query: 168 ASSSSSSAKHNQTLPPRFWSSTTDLQQQQECKVKSLLEKSKEHAGLKQRSPDDDAKPEMI 347
ASSSS P RFW S T+L Q+Q KVKSLLEK +E+A KQ DD KPEM
Sbjct: 230 ASSSSPP-------PQRFWPSRTNLTQEQS-KVKSLLEKCQEYAEKKQSL--DDPKPEMR 279
Query: 348 VKSFPLSFNPPSSSSMERRSCYSKLLPFPEMFAGGLGLNHQKLAPAVHMRSVIPVCSAPP 527
+K+ S P SSS+E R+CYSKLLPFP LNHQKLAPAVH+RSVIPVCSAPP
Sbjct: 280 IKT---SSPSPLSSSVE-RNCYSKLLPFPSFV-----LNHQKLAPAVHIRSVIPVCSAPP 330
Query: 528 PKP 536
PKP
Sbjct: 331 PKP 333
>TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 179 bits (452), Expect = 2e-045
Identities = 112/183 (61%), Positives = 127/183 (69%), Gaps = 27/183 (14%)
Frame = +3
Query: 12 KVVARVLSRFRPKEVRRREQHHSRR----RAIRQDTTTTR----DFLCEKLRLISPYTEE 167
++VARVLSRFRPKEV+RRE + SRR R IRQ+TTTT D LCEKLR I+ YT E
Sbjct: 170 EIVARVLSRFRPKEVKRREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEKLRSINLYTNE 229
Query: 168 ASSSSSSAKHNQTLPPRFWSSTTDLQQQQECKVKSLLEKSKEHAGLKQRSPDDDAKPEMI 347
ASSSS P RFW S T+L Q+Q KVKSLLEK +E+A KQ DD KPEM
Sbjct: 230 ASSSSPP-------PQRFWPSRTNLTQEQS-KVKSLLEKCQEYAEKKQSL--DDPKPEMR 279
Query: 348 VKSFPLSFNPPSSSSMERRSCYSKLLPFPEMFAGGLGLNHQKLAPAVHMRSVIPVCSAPP 527
+K+ S P SSS+E R+CYSKLLPFP LNHQKLAPAVH+RSVIPVCSAPP
Sbjct: 280 IKT---SSPSPLSSSVE-RNCYSKLLPFPSFV-----LNHQKLAPAVHIRSVIPVCSAPP 330
Query: 528 PKP 536
PKP
Sbjct: 331 PKP 333
>TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING PROTEIN 5);
double-stranded RNA binding | chr5:16438547-16439916 FORWARD
Length = 394
Score = 63 bits (152), Expect = 1e-010
Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 14/83 (16%)
Frame = +3
Query: 414 SKLLPFPEM----FAGGLGLNHQKLAPAVHMRSVIPVCSAPPPKPP--------SMQFNE 557
SK +PF +M F GG +N LAPAV MRSVIPV +APPPKP S NE
Sbjct: 290 SKQMPFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPPPKPNPNLNPSSLSSSVNE 349
Query: 558 --PNTSSCSAPSSLGIKGQEKKS 620
+ +SCS ++ G+ GQEKK+
Sbjct: 350 FTSSNNSCSVLNTPGLGGQEKKN 372
Score = 63 bits (151), Expect = 2e-010
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Frame = +3
Query: 12 KVVARVLSRFRPKEVRRREQHHS-RRRAIRQDTTTTRDFLCEKLRLISPYTEEASSSSSS 188
+ VARVLSRF+PKEVRRRE + RRR +QD + +D L E+LR I+ T +ASSSSS+
Sbjct: 169 EAVARVLSRFKPKEVRRRETTNQWRRRTSQQD--SNKDLLIERLRWINLLTNQASSSSST 226
Query: 189 AKHNQTLPPRFWSSTTDLQQQQECKVKSLLEKSKEHAGLKQRS 317
+ NQ F S + K+ +++ K+ + + ++
Sbjct: 227 STPNQHKNSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKT 269
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,317,164,518
Number of Sequences: 33410
Number of Extensions: 32317164518
Number of Successful Extensions: 1077284922
Number of sequences better than 0.0: 0
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