BLASTX 7.6.2
Query= UN74809 /QuerySize=601
(600 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G18390.1 | Symbols: EMB1865 | EMB1865 (embryo ... 171 3e-043
TAIR9_protein||AT3G01370.1 | Symbols: ATCFM2, CFM2 | ATCFM2 (CRM... 69 2e-012
TAIR9_protein||AT4G14510.1 | Symbols: | RNA binding | chr4:8337... 69 2e-012
TAIR9_protein||AT4G29750.1 | Symbols: | RNA binding | chr4:1456... 67 7e-012
TAIR9_protein||AT3G23070.1 | Symbols: | RNA binding | chr3:8203... 64 5e-011
>TAIR9_protein||AT3G18390.1 | Symbols: EMB1865 | EMB1865 (embryo defective
1865); RNA binding | chr3:6313572-6317584 FORWARD
Length = 849
Score = 171 bits (433), Expect = 3e-043
Identities = 86/105 (81%), Positives = 95/105 (90%), Gaps = 3/105 (2%)
Frame = -3
Query: 598 YYRGKNYQRPISLRPRNLLTKAKALKRSIAMQRHEALSQHIFELEKTIEQMQNELTAKNP 419
YYRGKNY+RPISLRPRNLLTKAKALKRSIAMQRHEALSQHI ELE+TIEQMQ++LT+KNP
Sbjct: 738 YYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSQLTSKNP 797
Query: 418 SYNESEWENDDDDDDDEDGE*EKDNAEDDESDWDEEADSEFTISS 284
SY+ESEWEND+DDDDDE E EKD+ ED+ESDWD E D E ISS
Sbjct: 798 SYSESEWENDEDDDDDE--EEEKDDVEDNESDWD-ETDGESAISS 839
>TAIR9_protein||AT3G01370.1 | Symbols: ATCFM2, CFM2 | ATCFM2 (CRM FAMILY MEMBER
2); RNA binding | chr3:139033-143477 FORWARD
Length = 1012
Score = 69 bits (166), Expect = 2e-012
Identities = 34/90 (37%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = -3
Query: 595 YRGKNYQRPISLRPRNLLTKAKALKRSIAMQRHEALSQHIFELEKTIEQMQNEL---TAK 425
YRGKNY+RP LRP+ LL+K +ALKRS+ QR ++L H+ +L IE++ +L +A
Sbjct: 665 YRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSAT 724
Query: 424 NPSYNESEWENDDDDDDDEDGE*EKDNAED 335
N ++++ E N +++ E+ E + A +
Sbjct: 725 NETWSDGESSNMMVEEETENQHTEPEKARE 754
>TAIR9_protein||AT4G14510.1 | Symbols: | RNA binding | chr4:8337390-8341057
REVERSE
Length = 933
Score = 69 bits (166), Expect = 2e-012
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 13/107 (12%)
Frame = -3
Query: 595 YRGKNYQRPISLRPRNLLTKAKALKRSIAMQRHEALSQHIFELEKTIEQMQNEL------ 434
YRGK+Y+RP +LRP+NLLTK KAL RS+ +Q+ EAL +HI ++ EQ++ E+
Sbjct: 776 YRGKDYKRPTTLRPKNLLTKRKALARSLELQKREALIKHIEAIQTRSEQLRAEIEQVELV 835
Query: 433 --TAKNPSYNESEWENDDDDDDDE-DGE*EKD---NAEDDESDWDEE 311
Y++ + D++ +E DGE E D + +DE + DEE
Sbjct: 836 KDKGDETLYDKLDMAYSSDEETEETDGE-EDDVYLDTYEDEGEDDEE 881
>TAIR9_protein||AT4G29750.1 | Symbols: | RNA binding | chr4:14569728-14572804
FORWARD
Length = 777
Score = 67 bits (162), Expect = 7e-012
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Frame = -3
Query: 595 YRGKNYQRPISLRPRNLLTKAKALKRSIAMQRHEALSQHIFELEKTIEQMQ----NELTA 428
YRGKNYQ P LRP NLLT+ KA RSI +QR EAL H+ +LE+ IE ++ +++
Sbjct: 691 YRGKNYQMPFRLRPSNLLTRKKAFARSIELQRREALKYHVADLEERIELLKTGQDDDMET 750
Query: 427 KNPSYNESE 401
+N S E E
Sbjct: 751 RNKSDEEEE 759
>TAIR9_protein||AT3G23070.1 | Symbols: | RNA binding | chr3:8203548-8207243
FORWARD
Length = 882
Score = 64 bits (155), Expect = 5e-011
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = -3
Query: 595 YRGKNYQRPISLRPRNLLTKAKALKRSIAMQRHEALSQHIFELEKTIEQMQNELTAKNPS 416
YRG++Y+RP LRP+NLLTK KAL RSI +QR E L +HI ++ +Q++ E+
Sbjct: 724 YRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEIEQMEKV 783
Query: 415 YNESEWENDDDDDDDEDGE*EKDNAEDDESDWDE 314
++ + E + D E+ + EDD+ + E
Sbjct: 784 TDKGDEELYNKLDMAYASSDEETDEEDDDDAFPE 817
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,401,264,862
Number of Sequences: 33410
Number of Extensions: 32401264862
Number of Successful Extensions: 1077317980
Number of sequences better than 0.0: 0
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