BLASTX 7.6.2
Query= UN74853 /QuerySize=669
(668 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containi... 67 7e-012
TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containi... 67 7e-012
TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containi... 58 4e-009
TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containi... 58 4e-009
TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containi... 58 4e-009
TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containi... 57 7e-009
>TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 67 bits (163), Expect = 7e-012
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +2
Query: 107 CTIEFDGASRGNPGRAGAGAVLRAPANTVIYSSREGLGVATN 232
CTIEFDGAS+GNPG+AGAGAVLRA N+V++ REG+G ATN
Sbjct: 155 CTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATN 196
>TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 67 bits (163), Expect = 7e-012
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +2
Query: 107 CTIEFDGASRGNPGRAGAGAVLRAPANTVIYSSREGLGVATN 232
CTIEFDGAS+GNPG+AGAGAVLRA N+V++ REG+G ATN
Sbjct: 155 CTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATN 196
>TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 58 bits (139), Expect = 4e-009
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +2
Query: 107 CTIEFDGASRGNPGRAGAGAVLRAPANTVIYSSREGLGVATN 232
C IEFDGAS+GNPG +GA AVL+ ++I+ R+GLG+ATN
Sbjct: 186 CIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATN 227
>TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 58 bits (139), Expect = 4e-009
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +2
Query: 107 CTIEFDGASRGNPGRAGAGAVLRAPANTVIYSSREGLGVATN 232
C IEFDGAS+GNPG +GA AVL+ ++I+ R+GLG+ATN
Sbjct: 186 CIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATN 227
>TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770486 REVERSE
Length = 260
Score = 58 bits (139), Expect = 4e-009
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +2
Query: 107 CTIEFDGASRGNPGRAGAGAVLRAPANTVIYSSREGLGVATN 232
C IEFDGAS+GNPG +GA AVL+ ++I+ R+GLG+ATN
Sbjct: 123 CIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATN 164
>TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containing protein |
chr1:8520834-8524690 FORWARD
Length = 536
Score = 57 bits (137), Expect = 7e-009
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +2
Query: 65 MARREDRSLPKDSYCTIEFDGASRGNPGRAGAGAVLRAPANTVIYSSREGLGVATN 232
+++ E + D C IEFDGAS+GNPG +GA AVL+ ++I R+GLG+ATN
Sbjct: 203 LSKVEPSAYISDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATN 258
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,401,264,862
Number of Sequences: 33410
Number of Extensions: 32401264862
Number of Successful Extensions: 1077317980
Number of sequences better than 0.0: 0
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