Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN74944


BLASTX 7.6.2

Query= UN74944 /QuerySize=429
        (428 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|15225317|ref|NP_180217.1| WD40 domain-containing protein [Ara...    120   7e-026
gi|224136642|ref|XP_002326910.1| predicted protein [Populus tric...     81   3e-014
gi|255538504|ref|XP_002510317.1| F-box and wd40 domain protein, ...     68   3e-010
gi|225428610|ref|XP_002281238.1| PREDICTED: hypothetical protein...     57   6e-007
gi|297741393|emb|CBI32524.3| unnamed protein product [Vitis vini...     57   6e-007
gi|224067294|ref|XP_002302452.1| predicted protein [Populus tric...     54   6e-006

>gi|15225317|ref|NP_180217.1| WD40 domain-containing protein [Arabidopsis
        thaliana]

          Length = 465

 Score =  120 bits (299), Expect = 7e-026
 Identities = 63/81 (77%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -1

Query: 428 LAVERDLEVSEGKDQKWIVYSGSLDKSVKVWGVSESFIDMNHMGTMQQQQQQQRHVISQS 249
           LAVE D E SE +D+KWIVYSGSLDKSVKVWGVSESFIDMN M  MQQQQQQ  HVIS S
Sbjct: 386 LAVEADREASERRDKKWIVYSGSLDKSVKVWGVSESFIDMNQMSMMQQQQQQ--HVISHS 443

Query: 248 ELVMFDGSFFSSVGGASSHQR 186
           E  M DGSF SS GGASSH+R
Sbjct: 444 EPFMSDGSFSSSAGGASSHRR 464

>gi|224136642|ref|XP_002326910.1| predicted protein [Populus trichocarpa]

          Length = 448

 Score =  81 bits (199), Expect = 3e-014
 Identities = 41/68 (60%), Positives = 49/68 (72%)
 Frame = -1

Query: 428 LAVERDLEVSEGKDQKWIVYSGSLDKSVKVWGVSESFIDMNHMGTMQQQQQQQRHVISQS 249
           LAVE D E S+  DQ+W+VYSGSLDKSVKVW V+E   DM  M  MQQQQQ QRH+ S +
Sbjct: 381 LAVEEDHEKSKDGDQRWVVYSGSLDKSVKVWSVAEMAPDMYQMAMMQQQQQYQRHMGSDA 440

Query: 248 ELVMFDGS 225
           + +  DGS
Sbjct: 441 DSLPSDGS 448

>gi|255538504|ref|XP_002510317.1| F-box and wd40 domain protein, putative
        [Ricinus communis]

          Length = 470

 Score =  68 bits (164), Expect = 3e-010
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = -1

Query: 428 LAVERDLEVSEGKDQKWIVYSGSLDKSVKVWGVSESFIDMNHMGTMQQQQ 279
           LAVE D E S+  DQ+W+VYSGSLDKSVKVW VSE   D+N +  MQQQQ
Sbjct: 397 LAVEEDREQSKPGDQRWVVYSGSLDKSVKVWSVSELAPDVNQVAMMQQQQ 446

>gi|225428610|ref|XP_002281238.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 445

 Score =  57 bits (136), Expect = 6e-007
 Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
 Frame = -1

Query: 428 LAVERDLEVSEGKDQKWIVYSGSLDKSVKVWGVSESFIDMNHMGTMQQ 285
           LAVE D E S  +DQ+WIVYSGSLDKSVK+W VSE   D+  M  M Q
Sbjct: 387 LAVEEDQE-STKRDQRWIVYSGSLDKSVKIWRVSEQAPDIQQMRLMAQ 433

>gi|297741393|emb|CBI32524.3| unnamed protein product [Vitis vinifera]

          Length = 429

 Score =  57 bits (136), Expect = 6e-007
 Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
 Frame = -1

Query: 428 LAVERDLEVSEGKDQKWIVYSGSLDKSVKVWGVSESFIDMNHMGTMQQ 285
           LAVE D E S  +DQ+WIVYSGSLDKSVK+W VSE   D+  M  M Q
Sbjct: 371 LAVEEDQE-STKRDQRWIVYSGSLDKSVKIWRVSEQAPDIQQMRLMAQ 417

>gi|224067294|ref|XP_002302452.1| predicted protein [Populus trichocarpa]

          Length = 413

 Score =  54 bits (127), Expect = 6e-006
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -1

Query: 428 LAVERDLEVSEGKDQKWIVYSGSLDKSVKVWGVSE 324
           LAVE D E S+  DQ+W+VYSGSLDKSVKVW V+E
Sbjct: 379 LAVEVDHEKSKDGDQRWVVYSGSLDKSVKVWSVAE 413

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 798,366,029,682
Number of Sequences: 15229318
Number of Extensions: 798366029682
Number of Successful Extensions: 240520672
Number of sequences better than 0.0: 0