BLASTX 7.6.2
Query= UN75232 /QuerySize=589
(588 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-bin... 65 2e-011
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 65 2e-011
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 65 3e-011
TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridyl... 60 1e-009
TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridyl... 60 1e-009
>TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 431
Score = 65 bits (158), Expect = 2e-011
Identities = 36/57 (63%), Positives = 40/57 (70%), Gaps = 13/57 (22%)
Frame = -2
Query: 560 MQNPRL------KQQQQRQQAMMQQALMQQHHSLYHPSLMAPPPPPPPPPQMEPLPS 408
MQN RL +QQQQ QQAM+QQA+MQQH SLYHP +MA PPQMEPLPS
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMA-------PPQMEPLPS 50
Score = 59 bits (140), Expect = 2e-009
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = -2
Query: 569 KKKMQNPRLKQQQQRQQAMMQQALMQQHHSLYHPSLMAPPPPPPPP 432
++ ++ + +QQQQ QQAM+QQA+MQQH SLYHP +MAPP P P
Sbjct: 4 QRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLP 49
Score = 49 bits (115), Expect = 2e-006
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -2
Query: 404 AAMYDGGFQNVAAAHQQLMYYQ* 336
AAMYDGG+QNVAAAHQQLMYYQ*
Sbjct: 409 AAMYDGGYQNVAAAHQQLMYYQ* 431
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 65 bits (158), Expect = 2e-011
Identities = 36/57 (63%), Positives = 40/57 (70%), Gaps = 13/57 (22%)
Frame = -2
Query: 560 MQNPRL------KQQQQRQQAMMQQALMQQHHSLYHPSLMAPPPPPPPPPQMEPLPS 408
MQN RL +QQQQ QQAM+QQA+MQQH SLYHP +MA PPQMEPLPS
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMA-------PPQMEPLPS 50
Score = 49 bits (115), Expect = 2e-006
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -2
Query: 404 AAMYDGGFQNVAAAHQQLMYYQ* 336
AAMYDGG+QNVAAAHQQLMYYQ*
Sbjct: 405 AAMYDGGYQNVAAAHQQLMYYQ* 427
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 65 bits (156), Expect = 3e-011
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 9/53 (16%)
Frame = -2
Query: 560 MQNPRLK--QQQQRQQAMMQQALMQQHHSLYHPSLMAPPPPPPPPPQMEPLPS 408
MQNPRLK QQQQ+QQAMMQQ + Q HSLYHP ++A PPQ+EP+PS
Sbjct: 1 MQNPRLKQHQQQQQQQAMMQQQALMQQHSLYHPGVLA-------PPQLEPVPS 46
>TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 420
Score = 60 bits (143), Expect = 1e-009
Identities = 32/47 (68%), Positives = 36/47 (76%), Gaps = 8/47 (17%)
Frame = -2
Query: 548 RLKQQQQRQQAMMQQALMQQHHSLYHPSLMAPPPPPPPPPQMEPLPS 408
RLKQQQQ+QQ MMQQALMQQ SLYHP L+A PPQ+EP+PS
Sbjct: 3 RLKQQQQQQQVMMQQALMQQ-QSLYHPGLLA-------PPQIEPIPS 41
>TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 417
Score = 60 bits (143), Expect = 1e-009
Identities = 32/47 (68%), Positives = 36/47 (76%), Gaps = 8/47 (17%)
Frame = -2
Query: 548 RLKQQQQRQQAMMQQALMQQHHSLYHPSLMAPPPPPPPPPQMEPLPS 408
RLKQQQQ+QQ MMQQALMQQ SLYHP L+A PPQ+EP+PS
Sbjct: 3 RLKQQQQQQQVMMQQALMQQ-QSLYHPGLLA-------PPQIEPIPS 41
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,491,402,046
Number of Sequences: 33410
Number of Extensions: 32491402046
Number of Successful Extensions: 1082521362
Number of sequences better than 0.0: 0
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