BLASTX 7.6.2
Query= UN75448 /QuerySize=458
(457 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297839897|ref|XP_002887830.1| hypothetical protein ARALYDRAFT... 141 4e-032
gi|19919074|gb|AAM08130.1|AF324348_1 putative DNA repair protein... 109 9e-023
gi|22330772|ref|NP_178158.2| DNA-repair protein XRCC1 [Arabidops... 109 9e-023
gi|110737739|dbj|BAF00808.1| DNA repair protein like XRCC1 [Arab... 109 9e-023
gi|334184049|ref|NP_001185449.1| DNA-repair protein XRCC1 [Arabi... 109 9e-023
gi|255552955|ref|XP_002517520.1| DNA-repair protein xrcc1, putat... 84 5e-015
gi|255638851|gb|ACU19729.1| unknown [Glycine max] 72 2e-011
gi|226504560|ref|NP_001149899.1| LOC100283527 [Zea mays] 67 4e-010
gi|225442713|ref|XP_002280451.1| PREDICTED: hypothetical protein... 55 2e-006
>gi|297839897|ref|XP_002887830.1| hypothetical protein ARALYDRAFT_895951
[Arabidopsis lyrata subsp. lyrata]
Length = 356
Score = 141 bits (353), Expect = 4e-032
Identities = 79/110 (71%), Positives = 87/110 (79%), Gaps = 6/110 (5%)
Frame = -2
Query: 456 LEQKQDVGSVTELRSFVPRVVKELGKMESSCKTENSTAASKDQLCKQAKSWKKIYEAELA 277
LEQKQD+GSVTEL SFVPRVVKELGK+ESS K ENST ASK++LCKQAKSWKK+YE ELA
Sbjct: 251 LEQKQDIGSVTELWSFVPRVVKELGKIESSSKKENST-ASKEELCKQAKSWKKMYEVELA 309
Query: 276 KKGEEEEEASGTKKRRTTSSGVVGSGYESDETVEMTEEEIEHAYSNVCLE 127
E E+S TK R T+ V GY+SDETVEMTEEEIE AY NV LE
Sbjct: 310 --NTSEAESSRTKSRETSR---VAGGYDSDETVEMTEEEIELAYRNVSLE 354
>gi|19919074|gb|AAM08130.1|AF324348_1 putative DNA repair protein XRCC1
[Arabidopsis thaliana]
Length = 353
Score = 109 bits (272), Expect = 9e-023
Identities = 56/66 (84%), Positives = 61/66 (92%), Gaps = 1/66 (1%)
Frame = -2
Query: 456 LEQKQDVGSVTELRSFVPRVVKELGKMESSCKTENSTAASKDQLCKQAKSWKKIYEAELA 277
LEQKQD+GSVTEL SFVPRVVKELGKMESS K ENST ASK+++CKQAKSWKKIYEAELA
Sbjct: 255 LEQKQDIGSVTELWSFVPRVVKELGKMESSSKKENST-ASKEEVCKQAKSWKKIYEAELA 313
Query: 276 KKGEEE 259
K GE+E
Sbjct: 314 KPGEDE 319
>gi|22330772|ref|NP_178158.2| DNA-repair protein XRCC1 [Arabidopsis thaliana]
Length = 353
Score = 109 bits (272), Expect = 9e-023
Identities = 56/66 (84%), Positives = 61/66 (92%), Gaps = 1/66 (1%)
Frame = -2
Query: 456 LEQKQDVGSVTELRSFVPRVVKELGKMESSCKTENSTAASKDQLCKQAKSWKKIYEAELA 277
LEQKQD+GSVTEL SFVPRVVKELGKMESS K ENST ASK+++CKQAKSWKKIYEAELA
Sbjct: 255 LEQKQDIGSVTELWSFVPRVVKELGKMESSSKKENST-ASKEEVCKQAKSWKKIYEAELA 313
Query: 276 KKGEEE 259
K GE+E
Sbjct: 314 KPGEDE 319
>gi|110737739|dbj|BAF00808.1| DNA repair protein like XRCC1 [Arabidopsis
thaliana]
Length = 353
Score = 109 bits (272), Expect = 9e-023
Identities = 56/66 (84%), Positives = 61/66 (92%), Gaps = 1/66 (1%)
Frame = -2
Query: 456 LEQKQDVGSVTELRSFVPRVVKELGKMESSCKTENSTAASKDQLCKQAKSWKKIYEAELA 277
LEQKQD+GSVTEL SFVPRVVKELGKMESS K ENST ASK+++CKQAKSWKKIYEAELA
Sbjct: 255 LEQKQDIGSVTELWSFVPRVVKELGKMESSSKKENST-ASKEEVCKQAKSWKKIYEAELA 313
Query: 276 KKGEEE 259
K GE+E
Sbjct: 314 KPGEDE 319
>gi|334184049|ref|NP_001185449.1| DNA-repair protein XRCC1 [Arabidopsis
thaliana]
Length = 341
Score = 109 bits (272), Expect = 9e-023
Identities = 56/66 (84%), Positives = 61/66 (92%), Gaps = 1/66 (1%)
Frame = -2
Query: 456 LEQKQDVGSVTELRSFVPRVVKELGKMESSCKTENSTAASKDQLCKQAKSWKKIYEAELA 277
LEQKQD+GSVTEL SFVPRVVKELGKMESS K ENST ASK+++CKQAKSWKKIYEAELA
Sbjct: 243 LEQKQDIGSVTELWSFVPRVVKELGKMESSSKKENST-ASKEEVCKQAKSWKKIYEAELA 301
Query: 276 KKGEEE 259
K GE+E
Sbjct: 302 KPGEDE 307
>gi|255552955|ref|XP_002517520.1| DNA-repair protein xrcc1, putative [Ricinus
communis]
Length = 379
Score = 84 bits (205), Expect = 5e-015
Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 6/111 (5%)
Frame = -2
Query: 456 LEQKQDVGSVTELRSFVPRVVKELGKMESSCKTENSTAASKDQLCKQAKSWKKIYEAELA 277
LEQ QDV + E + VP V+EL K+ + ++ SK+ LCKQAK++K+IYEAEL+
Sbjct: 265 LEQDQDVRKIVEQWNIVPHAVEELIKLVDA--GNSAACLSKEDLCKQAKAFKQIYEAELS 322
Query: 276 KKGEEEEEASGTKKRRTTSSG----VVGSGYESDETVEMTEEEIEHAYSNV 136
++ + + K SG G+ Y+SDETVEMTEEEI+ AY+NV
Sbjct: 323 NVNDDSKLKTKRLKNDENESGGNGRSNGADYDSDETVEMTEEEIDLAYNNV 373
>gi|255638851|gb|ACU19729.1| unknown [Glycine max]
Length = 382
Score = 72 bits (174), Expect = 2e-011
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 13/115 (11%)
Frame = -2
Query: 447 KQDVGSVTELRSFVPRVVKELGKMESSCKTENSTAASKDQLCKQAKSWKKIYEAELAKKG 268
KQD+ TE F+PRVV+EL K + N + SK+ L +QA K+IYE EL
Sbjct: 269 KQDIRKGTEDWMFLPRVVEELAKFD---VVGNKGSLSKEDLRRQALDCKRIYEEELNSLD 325
Query: 267 EEEEEASGTKKRRTTSSG---VVGSG---YESDETVEMTEEEIEHAY----SNVC 133
E ++ S K + + +G + SG Y+SDET+EMTE+EI+ AY SN+C
Sbjct: 326 HERKKNSKVNKEQRSKTGRTNAMSSGAVEYDSDETIEMTEQEIDIAYKALSSNIC 380
>gi|226504560|ref|NP_001149899.1| LOC100283527 [Zea mays]
Length = 351
Score = 67 bits (163), Expect = 4e-010
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Frame = -2
Query: 441 DVGSVTELRSFVPRVVKELGKMESSCKTENSTAASKDQLCKQAKSWKKIYEAELAK---- 274
D+ V E SFVP VV EL K++ K A K+QL + A KKIY+AE A+
Sbjct: 238 DIKGVAEQWSFVPHVVNELLKLDGGGK---GAALPKEQLRQLAGKCKKIYQAEFARTDMG 294
Query: 273 ---KGEEEEEASGTKKRRTTSSGVVGSGYESDETVEMTEEEIEHA 148
KG + + T+ RR T++ Y+SD T+EMTEEEI+ A
Sbjct: 295 DKNKGRHQNDPHVTEHRRKTNTKSEDDHYDSDATIEMTEEEIDFA 339
>gi|225442713|ref|XP_002280451.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 371
Score = 55 bits (131), Expect = 2e-006
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Frame = -2
Query: 456 LEQKQDVGSVTELRSFVPRVVKELGKMESSCKTENS-TAASKDQLCKQAKSWKKIYEAEL 280
L QKQD+ +T+ +F+PRVV+EL K+ES T NS ++ SK L K A + K+IYEAE
Sbjct: 270 LGQKQDILEMTKEWNFIPRVVEELVKLES---TRNSHSSLSKADLYKHAITCKEIYEAEF 326
Query: 279 AKKGEEE 259
+KKG+++
Sbjct: 327 SKKGKKK 333
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 880,272,133,277
Number of Sequences: 15229318
Number of Extensions: 880272133277
Number of Successful Extensions: 251548708
Number of sequences better than 0.0: 0
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