BLASTX 7.6.2
Query= UN75884 /QuerySize=640
(639 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G42320.1 | Symbols: | nucleolar protein gar2-... 260 5e-070
TAIR9_protein||AT2G42320.2 | Symbols: | nucleolar protein gar2-... 260 5e-070
TAIR9_protein||AT3G57780.1 | Symbols: | EXPRESSED IN: 20 plant ... 226 1e-059
TAIR9_protein||AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular... 146 2e-035
TAIR9_protein||AT3G01810.2 | Symbols: | FUNCTIONS IN: molecular... 146 2e-035
TAIR9_protein||AT5G43230.1 | Symbols: | unknown protein | chr5:... 105 3e-023
TAIR9_protein||AT5G06930.1 | Symbols: | LOCATED IN: chloroplast... 102 2e-022
>TAIR9_protein||AT2G42320.1 | Symbols: | nucleolar protein gar2-related |
chr2:17628102-17630657 FORWARD
Length = 670
Score = 260 bits (664), Expect = 5e-070
Identities = 127/158 (80%), Positives = 139/158 (87%), Gaps = 1/158 (0%)
Frame = +1
Query: 109 LKKQRKTSLSLYSVVPDHSSSAHKLRTPARRISRIYIHACKHFARGKRATIARNSVSGLV 288
L++ +SLYSVVPDH SSAHKL TPARRISRIYIHACKHF +GKRATIARNSVSGLV
Sbjct: 191 LREVAALEISLYSVVPDHCSSAHKLHTPARRISRIYIHACKHFTQGKRATIARNSVSGLV 250
Query: 289 LVARSCGNDVSRLTFWLSNIITLREIISKAFGKPRVTESSEANGSENGGDSGKKTNLRWK 468
LVA+SCGNDVSRLTFWLSNII LR+IIS+AFG+ R+T+ SE N S N DSGKKTNLRWK
Sbjct: 251 LVAKSCGNDVSRLTFWLSNIIALRQIISQAFGRSRITQISEPNESGN-SDSGKKTNLRWK 309
Query: 469 NGLQELLEDWQETETFTAALEKVELWVFSRIVESVWWQ 582
NG Q+LLEDWQETETFT ALEK+E WVFSRIVESVWWQ
Sbjct: 310 NGFQQLLEDWQETETFTTALEKIEFWVFSRIVESVWWQ 347
>TAIR9_protein||AT2G42320.2 | Symbols: | nucleolar protein gar2-related |
chr2:17628102-17630657 FORWARD
Length = 670
Score = 260 bits (664), Expect = 5e-070
Identities = 127/158 (80%), Positives = 139/158 (87%), Gaps = 1/158 (0%)
Frame = +1
Query: 109 LKKQRKTSLSLYSVVPDHSSSAHKLRTPARRISRIYIHACKHFARGKRATIARNSVSGLV 288
L++ +SLYSVVPDH SSAHKL TPARRISRIYIHACKHF +GKRATIARNSVSGLV
Sbjct: 191 LREVAALEISLYSVVPDHCSSAHKLHTPARRISRIYIHACKHFTQGKRATIARNSVSGLV 250
Query: 289 LVARSCGNDVSRLTFWLSNIITLREIISKAFGKPRVTESSEANGSENGGDSGKKTNLRWK 468
LVA+SCGNDVSRLTFWLSNII LR+IIS+AFG+ R+T+ SE N S N DSGKKTNLRWK
Sbjct: 251 LVAKSCGNDVSRLTFWLSNIIALRQIISQAFGRSRITQISEPNESGN-SDSGKKTNLRWK 309
Query: 469 NGLQELLEDWQETETFTAALEKVELWVFSRIVESVWWQ 582
NG Q+LLEDWQETETFT ALEK+E WVFSRIVESVWWQ
Sbjct: 310 NGFQQLLEDWQETETFTTALEKIEFWVFSRIVESVWWQ 347
>TAIR9_protein||AT3G57780.1 | Symbols: | EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3024
Blast hits to 2177 proteins in 255 species: Archae - 2; Bacteria - 181;
Metazoa - 988; Fungi - 289; Plants - 172; Viruses - 72; Other
Eukaryotes - 1320 (source: NCBI BLink). | chr3:21399766-21402326
REVERSE
Length = 671
Score = 226 bits (574), Expect = 1e-059
Identities = 114/166 (68%), Positives = 136/166 (81%), Gaps = 8/166 (4%)
Frame = +1
Query: 109 LKKQRKTSLSLYSVVPDHSSSAHKLRTPARRISRIYIHACKHFARGKRATIARNSVSGLV 288
L++ +SLYSVVPDHSSSAHKL TPARRISRIYIHACKH+++GKRAT+ARNSVSGL+
Sbjct: 182 LREVAALEISLYSVVPDHSSSAHKLHTPARRISRIYIHACKHWSQGKRATVARNSVSGLI 241
Query: 289 LVARSCGNDVSRLTFWLSNIITLREIISKAFGKPRV----TESSEANGSENG--GDSGKK 450
L A+SCGNDVSRLTFWLSNII+LREII +AFGK V TE+S +NGSE+ G +K
Sbjct: 242 LAAKSCGNDVSRLTFWLSNIISLREIILQAFGKTSVPSHFTETSASNGSEHNVLGKVRRK 301
Query: 451 TN--LRWKNGLQELLEDWQETETFTAALEKVELWVFSRIVESVWWQ 582
N + NG +++ EDWQE++TFTAALEKVE W+FSRIVESVWWQ
Sbjct: 302 KNQWTKQSNGFKQVFEDWQESQTFTAALEKVEFWIFSRIVESVWWQ 347
>TAIR9_protein||AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 1293 Blast hits to 384
proteins in 97 species: Archae - 2; Bacteria - 96; Metazoa - 212; Fungi
- 99; Plants - 59; Viruses - 0; Other Eukaryotes - 825 (source: NCBI
BLink). | chr3:289218-292557 FORWARD
Length = 922
Score = 146 bits (366), Expect = 2e-035
Identities = 73/158 (46%), Positives = 103/158 (65%), Gaps = 7/158 (4%)
Frame = +1
Query: 136 SLYSVVPDHSSSAHKLRTPARRISRIYIHACKHFARGKRATIARNSVSGLVLVARSCGND 315
+LYSVV +H SS+ K+ PARR+ R+Y+HAC+ +RA A ++VSGLVLVA++CGND
Sbjct: 430 ALYSVVAEHGSSSSKVHAPARRLLRLYLHACRETHLSRRANAAESAVSGLVLVAKACGND 489
Query: 316 VSRLTFWLSNIITLREIISKAFGKPRVTESSEANGSENGG--DSGKKTNLRWKNGLQELL 489
V RLTFWLSN I LR IIS + + S+ + ++ K+++L+WK+
Sbjct: 490 VPRLTFWLSNTIVLRTIISDTSAEEELPVSAGPGPRKQKAERETEKRSSLKWKDSPLSKK 549
Query: 490 E-----DWQETETFTAALEKVELWVFSRIVESVWWQSL 588
+ W + TF ALEKVE W+FSR+VES+WWQ+L
Sbjct: 550 DIKSFGAWDDPVTFITALEKVEAWIFSRVVESIWWQTL 587
>TAIR9_protein||AT3G01810.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 1224 Blast hits to 385
proteins in 102 species: Archae - 2; Bacteria - 107; Metazoa - 205;
Fungi - 107; Plants - 62; Viruses - 0; Other Eukaryotes - 741 (source:
NCBI BLink). | chr3:289218-292375 FORWARD
Length = 860
Score = 146 bits (366), Expect = 2e-035
Identities = 73/158 (46%), Positives = 103/158 (65%), Gaps = 7/158 (4%)
Frame = +1
Query: 136 SLYSVVPDHSSSAHKLRTPARRISRIYIHACKHFARGKRATIARNSVSGLVLVARSCGND 315
+LYSVV +H SS+ K+ PARR+ R+Y+HAC+ +RA A ++VSGLVLVA++CGND
Sbjct: 430 ALYSVVAEHGSSSSKVHAPARRLLRLYLHACRETHLSRRANAAESAVSGLVLVAKACGND 489
Query: 316 VSRLTFWLSNIITLREIISKAFGKPRVTESSEANGSENGG--DSGKKTNLRWKNGLQELL 489
V RLTFWLSN I LR IIS + + S+ + ++ K+++L+WK+
Sbjct: 490 VPRLTFWLSNTIVLRTIISDTSAEEELPVSAGPGPRKQKAERETEKRSSLKWKDSPLSKK 549
Query: 490 E-----DWQETETFTAALEKVELWVFSRIVESVWWQSL 588
+ W + TF ALEKVE W+FSR+VES+WWQ+L
Sbjct: 550 DIKSFGAWDDPVTFITALEKVEAWIFSRVVESIWWQTL 587
>TAIR9_protein||AT5G43230.1 | Symbols: | unknown protein |
chr5:17349125-17352747 FORWARD
Length = 849
Score = 105 bits (260), Expect = 3e-023
Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 4/132 (3%)
Frame = +1
Query: 49 IKTANLSEHQSQSRDFTLSRLKKQRKTSLSLYSVVPDHSSSAHKLRTPARRISRIYIHAC 228
I L Q + LK+ ++YSVV +H+SS K+ PARR++R Y+HAC
Sbjct: 355 INKVGLITPQDSKTETLEDELKEAAVLEAAIYSVVAEHTSSMSKVHAPARRLARFYLHAC 414
Query: 229 KHFA--RGKRATIARNSVSGLVLVARSCGNDVSRLTFWLSNIITLREIISKAFGKPRVTE 402
K KRAT AR +VSGL+LV+++CGNDV RLTFWLSN I LR I+S+ K ++
Sbjct: 415 KGNGSDHSKRATAARAAVSGLILVSKACGNDVPRLTFWLSNSIVLRAILSRGMEKMKIV- 473
Query: 403 SSEANGSENGGD 438
E GS+ D
Sbjct: 474 -PEKAGSDEWED 484
Score = 53 bits (125), Expect = 2e-007
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 490 EDWQETETFTAALEKVELWVFSRIVESVWWQSL 588
++W++ F AALEK E W+FSR+V+SVWWQS+
Sbjct: 480 DEWEDPRAFLAALEKFESWIFSRVVKSVWWQSM 512
>TAIR9_protein||AT5G06930.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
15 plant structures; EXPRESSED DURING: 7 growth stages; BEST
Arabidopsis thaliana protein match is: nucleolar protein gar2-related
(TAIR:AT2G42320.2); Has 3144 Blast hits to 1363 proteins in 247
species: Archae - 2; Bacteria - 721; Metazoa - 835; Fungi - 297; Plants
- 80; Viruses - 10; Other Eukaryotes - 1199 (source: NCBI BLink). |
chr5:2145139-2147849 FORWARD
Length = 724
Score = 102 bits (253), Expect = 2e-022
Identities = 56/114 (49%), Positives = 75/114 (65%), Gaps = 10/114 (8%)
Frame = +1
Query: 109 LKKQRKTSLSLYSVVPDHSSSAHKLRTPARRISRIYIHACKHFARGKRATIARNSVSGLV 288
L++ +SLYSV P+H SS+HKL PAR +SR+Y A K+ + K ++ +N VSGL
Sbjct: 273 LREVAALEMSLYSVFPEHGSSSHKLHKPARNLSRLYALARKNQSENKIISVTKNIVSGLS 332
Query: 289 LVARSCGNDVSRLTFWLSNIITLREIISKAFGKPRVTESSEANG----SENGGD 438
L+ +SCG+DVSRLT+WLSN + LREIIS FG SS+ NG E+ GD
Sbjct: 333 LLLKSCGSDVSRLTYWLSNTVMLREIISLDFG------SSKLNGLNSLKEDWGD 380
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,764,979,905
Number of Sequences: 33410
Number of Extensions: 32764979905
Number of Successful Extensions: 1098300070
Number of sequences better than 0.0: 0
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