BLASTX 7.6.2
Query= UN76145 /QuerySize=783
(782 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6YYA3|CRS1_ORYSJ Chloroplastic group IIA intron splicing fac... 143 2e-033
sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing fac... 138 6e-032
sp|Q9LF10|CRS1_ARATH Chloroplastic group IIA intron splicing fac... 136 2e-031
sp|Q67XL4|Y3544_ARATH Uncharacterized CRM domain-containing prot... 96 3e-019
sp|Q17RH7|TPRXL_HUMAN Putative protein TPRXL OS=Homo sapiens GN=... 57 1e-007
sp|Q75JC9|Y8484_DICDI Uncharacterized protein DDB_G0271670 OS=Di... 57 1e-007
>sp|Q6YYA3|CRS1_ORYSJ Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0360100 PE=2
SV=1
Length = 725
Score = 143 bits (359), Expect = 2e-033
Identities = 67/148 (45%), Positives = 108/148 (72%), Gaps = 2/148 (1%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E +TEEER +F+K+GL+M +LLGRRGVF+G +E +H HWK++E+VK++ K
Sbjct: 562 DRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQ 621
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARSVEL 361
++ LE E+GG L+++++ + +AII+YRGK+Y+RP++ P NLLTKR+AL RS+E+
Sbjct: 622 ITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEV 681
Query: 362 QRRQGIIKHIAVVQART-EQLRAEIEQV 442
QRR G +K+ A + ++ ++L+ E+ V
Sbjct: 682 QRR-GSMKYFAQERKKSIDELKRELRNV 708
>sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1
Length = 715
Score = 138 bits (346), Expect = 6e-032
Identities = 64/147 (43%), Positives = 101/147 (68%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E +TEEE+ +F+++G +M +LLGRRG+FDG +E +H HWK++E+VK++ K
Sbjct: 560 DREHLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQ 619
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARSVEL 361
A LE E+GGIL++V+K++ +AII+YRGK+Y+RP++ NLLTKR+AL RS+E+
Sbjct: 620 IMYAASLLEVETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEV 679
Query: 362 QRRQGIIKHIAVVQARTEQLRAEIEQV 442
QRR + + Q +L+ ++ V
Sbjct: 680 QRRGSMKYFVRERQKSILELKRKLRYV 706
>sp|Q9LF10|CRS1_ARATH Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic OS=Arabidopsis thaliana GN=At5g16180 PE=3 SV=1
Length = 718
Score = 136 bits (341), Expect = 2e-031
Identities = 71/150 (47%), Positives = 103/150 (68%), Gaps = 3/150 (2%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E +T EER +++GL+M + L+LGRRGVF G +E +H HWK+RE+ K++ K F
Sbjct: 566 DIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSR 625
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRP-SELRPKNLLTKRKALARSVE 358
A ALE ES G+L+S++K+ +G+AI++YRGK+YKRP S+L +NLLTKRKAL RSV
Sbjct: 626 VVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVV 685
Query: 359 LQRRQGIIKHIAVVQART-EQLRAEIEQVE 445
+Q R G +K A + R E L+ + ++
Sbjct: 686 MQ-RLGSLKFFAYQRERAIEDLKVSLVNLQ 714
>sp|Q67XL4|Y3544_ARATH Uncharacterized CRM domain-containing protein At3g25440,
chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1
Length = 444
Score = 96 bits (236), Expect = 3e-019
Identities = 59/195 (30%), Positives = 109/195 (55%), Gaps = 11/195 (5%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E +T EE F + K+GL+ K ++ +GRRG++ G + NMHLHWK + +++++K + +
Sbjct: 173 DPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDE 232
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSE--LRPKNLLTKRKALARSV 355
+++A+ L +GGI++ V +G II+YRGK+Y +P + P+ L ++KAL +S
Sbjct: 233 VKEIAVELARLTGGIVLDV---HEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSK 289
Query: 356 ELQRRQGIIKHIAVVQARTEQLRAEIE---QVELVKDKGDQVLYNKLDMAYSSSD---EE 517
+ + K+I ++ + L+A+ E VK +Q +L S+ E+
Sbjct: 290 CRDALRAVRKYIPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKKIIERSEECLED 349
Query: 518 TEETDGEGDDIYLDT 562
+E D G ++ D+
Sbjct: 350 EQEEDEAGLELATDS 364
>sp|Q17RH7|TPRXL_HUMAN Putative protein TPRXL OS=Homo sapiens GN=TPRXL PE=5
SV=2
Length = 258
Score = 57 bits (136), Expect = 1e-007
Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Frame = -3
Query: 717 ASGAVEDAESSSSSSNSVSSSSESQSSSSESNSTSDSEPLA*IPPSSLSSSYVSK*MSSP 538
+S + SSSSS++S SSSS S SSSS S+S S S + P SS SSS S SS
Sbjct: 75 SSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSS 134
Query: 537 SPSVSSVSSSLEE*AMSSLLYNT*SPLSFTSSTCSISA 424
SPS SS SSS + SS SP S +SS+ S S+
Sbjct: 135 SPSSSSSSSSSSPSSSSS------SPSSSSSSSSSSSS 166
>sp|Q75JC9|Y8484_DICDI Uncharacterized protein DDB_G0271670 OS=Dictyostelium
discoideum GN=DDB_G0271670 PE=4 SV=1
Length = 374
Score = 57 bits (136), Expect = 1e-007
Identities = 45/104 (43%), Positives = 60/104 (57%)
Frame = -3
Query: 723 EVASGAVEDAESSSSSSNSVSSSSESQSSSSESNSTSDSEPLA*IPPSSLSSSYVSK*MS 544
+ +S + + SSSSSS+S SSSS S SSSS S+S+S S + SS SSS S S
Sbjct: 64 DTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 123
Query: 543 SPSPSVSSVSSSLEE*AMSSLLYNT*SPLSFTSSTCSISALNCS 412
S S S SS SSS + SS ++ S S +SS+ S S+ + S
Sbjct: 124 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 167
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,109,856,478
Number of Sequences: 518415
Number of Extensions: 247109856478
Number of Successful Extensions: 1611608570
Number of sequences better than 0.0: 0
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