BLASTX 7.6.2
Query= UN76396 /QuerySize=815
(814 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular... 334 5e-092
TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular... 207 1e-053
TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein | chr5:... 207 1e-053
>TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF618 (InterPro:IPR006903), Regulation of nuclear pre-mRNA
protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G65180.1); Has 4531 Blast hits to 4161 proteins in 412
species: Archae - 14; Bacteria - 404; Metazoa - 1999; Fungi - 666;
Plants - 262; Viruses - 36; Other Eukaryotes - 1150 (source: NCBI
BLink). | chr5:3145994-3148049 REVERSE
Length = 470
Score = 334 bits (855), Expect = 5e-092
Identities = 178/228 (78%), Positives = 188/228 (82%), Gaps = 15/228 (6%)
Frame = -1
Query: 814 VNQLKDALREQELELEYLEAQIQVAQEQTEEAQNMQKRLKHEDYAPKPTTVAPGSVSTDN 635
VNQLKDALREQE EL+ L+AQIQVA+EQTEEAQNMQKRL EDY K TT A + T+
Sbjct: 252 VNQLKDALREQESELDNLKAQIQVAKEQTEEAQNMQKRLNDEDYTSKQTTAA--TTITET 309
Query: 634 NSDTKSGQASKMTPASIAAMLTASTSSHMIMQSVLSSFAAEATKSSGLSKPESTAPVSDS 455
N +TKSGQASKMTPASIAAMLTASTSSHMIMQSVLSSFAAEATK+SGLSK EST PVSD+
Sbjct: 310 NDNTKSGQASKMTPASIAAMLTASTSSHMIMQSVLSSFAAEATKTSGLSKSESTVPVSDT 369
Query: 454 NTFVPSYN---NQTPATQGQYHHVIPNPAAAPQPQFLNPPVMNNPYGFGNIPLMPPGLPP 284
N PSYN NQTP TQGQY HVIPNP P PQFL PPVMNNPY FGNIPLMPPGLPP
Sbjct: 370 NASFPSYNNSQNQTPTTQGQY-HVIPNP---PPPQFLKPPVMNNPYAFGNIPLMPPGLPP 425
Query: 283 PPPPPHMIGNQQ---PQSNSAQQQQQQPQQGTYQPSGIMYYGAPHHS* 149
PPPPPH+IGNQQ PQSNSAQQ QQ P T+QP GIMYYGAPHHS*
Sbjct: 426 PPPPPHLIGNQQPQIPQSNSAQQSQQGP---TFQPPGIMYYGAPHHS* 470
>TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903),
Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), ENTH/VHS
(InterPro:IPR008942); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G10060.1); Has 3523 Blast hits to 3241
proteins in 333 species: Archae - 25; Bacteria - 251; Metazoa - 1575;
Fungi - 421; Plants - 142; Viruses - 17; Other Eukaryotes - 1092
(source: NCBI BLink). | chr5:26045625-26047806 FORWARD
Length = 440
Score = 207 bits (525), Expect = 1e-053
Identities = 127/229 (55%), Positives = 154/229 (67%), Gaps = 45/229 (19%)
Frame = -1
Query: 814 VNQLKDALREQELELEYLEAQIQVAQEQTEEAQNMQKRLKHEDYAPKPTTVAPGSVSTDN 635
VN L++ALREQE ELE L++QIQVAQEQTEEAQNMQKRL +E + N
Sbjct: 250 VNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNE--------------TPVN 295
Query: 634 NSDTKSGQASKMTPASIAA---MLTASTSSHMIMQSVLSSFAAEATKSSGLSKPESTAPV 464
N++ SGQ++K+TPASIAA MLT+ST+S MIM SVLSSFAAEAT++SGL+K +
Sbjct: 296 NNNGTSGQSAKITPASIAAMAEMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNT---- 351
Query: 463 SDSNTFVPSYNNQTPATQGQYHHVIPNPAAAPQPQFLNPPVMNNPYGFGNIPLMPPG-LP 287
SD+N FV N Q +H+IPNPAA+ Q PYGFGNIPLMPPG LP
Sbjct: 352 SDTNAFVVPPN-------PQQYHIIPNPAASQQ----------FPYGFGNIPLMPPGALP 394
Query: 286 PPPP---PPHMIGNQQPQSNSAQQQQQQPQQGTYQPSGIMYYGAPHHS* 149
PPPP PPHM+ N Q N+AQQQ QQ Q ++ P G+MY+G PHHS*
Sbjct: 395 PPPPGTLPPHMMNNNN-QPNAAQQQAQQGQ--SFHPPGMMYFGPPHHS* 440
>TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein |
chr5:26046478-26047806 FORWARD
Length = 312
Score = 207 bits (525), Expect = 1e-053
Identities = 127/229 (55%), Positives = 154/229 (67%), Gaps = 45/229 (19%)
Frame = -1
Query: 814 VNQLKDALREQELELEYLEAQIQVAQEQTEEAQNMQKRLKHEDYAPKPTTVAPGSVSTDN 635
VN L++ALREQE ELE L++QIQVAQEQTEEAQNMQKRL +E + N
Sbjct: 122 VNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNE--------------TPVN 167
Query: 634 NSDTKSGQASKMTPASIAA---MLTASTSSHMIMQSVLSSFAAEATKSSGLSKPESTAPV 464
N++ SGQ++K+TPASIAA MLT+ST+S MIM SVLSSFAAEAT++SGL+K +
Sbjct: 168 NNNGTSGQSAKITPASIAAMAEMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNT---- 223
Query: 463 SDSNTFVPSYNNQTPATQGQYHHVIPNPAAAPQPQFLNPPVMNNPYGFGNIPLMPPG-LP 287
SD+N FV N Q +H+IPNPAA+ Q PYGFGNIPLMPPG LP
Sbjct: 224 SDTNAFVVPPN-------PQQYHIIPNPAASQQ----------FPYGFGNIPLMPPGALP 266
Query: 286 PPPP---PPHMIGNQQPQSNSAQQQQQQPQQGTYQPSGIMYYGAPHHS* 149
PPPP PPHM+ N Q N+AQQQ QQ Q ++ P G+MY+G PHHS*
Sbjct: 267 PPPPGTLPPHMMNNNN-QPNAAQQQAQQGQ--SFHPPGMMYFGPPHHS* 312
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,946,807,259
Number of Sequences: 33410
Number of Extensions: 32946807259
Number of Successful Extensions: 1108835660
Number of sequences better than 0.0: 0
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