BLASTX 7.6.2
Query= UN76419 /QuerySize=788
(787 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1 (PO... 299 2e-081
TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding p... 235 2e-062
TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding p... 233 9e-062
TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding p... 208 5e-054
TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotei... 53 2e-007
TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear r... 51 6e-007
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 50 1e-006
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 47 9e-006
>TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1
(POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding /
protein binding | chr5:20779760-20781241 FORWARD
Length = 228
Score = 299 bits (764), Expect = 2e-081
Identities = 144/159 (90%), Positives = 150/159 (94%), Gaps = 1/159 (0%)
Frame = -1
Query: 763 SLREMQAKAEKEMGADQDPSSAISSAEKEEVDSRSIYFGNVDYACTPEEVQQHFQSCGTV 584
+LREMQAKAEK+MGA QDPS +S+AEKEEVDSRSIY GNVDYACTPEEVQQHFQSCGTV
Sbjct: 70 ALREMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 129
Query: 583 NRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRG 404
NRVTILTDKFGQPKGFAYVEFVE +AVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRG
Sbjct: 130 NRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRG 189
Query: 403 R-RPFRPMRGFMPGIPFYAPYGYGRVPRFRRPMRYRPY* 290
R RPFRPMRGFMPG+PFY PY YGRVPRFRRPMRYRPY*
Sbjct: 190 RGRPFRPMRGFMPGVPFYPPYAYGRVPRFRRPMRYRPY* 228
>TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:26080501-26082984 REVERSE
Length = 221
Score = 235 bits (599), Expect = 2e-062
Identities = 117/162 (72%), Positives = 132/162 (81%), Gaps = 6/162 (3%)
Frame = -1
Query: 763 SLREMQAKAEKEMGADQDPSSAISSAEKEEVDSRSIYFGNVDYACTPEEVQQHFQSCGTV 584
+LREMQAK EKEMGA S A + A KEEVD+RS++ GNVDYACTPEEVQQHFQ+CGTV
Sbjct: 59 ALREMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTV 118
Query: 583 NRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRG 404
+RVTILTDKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KV KRTNVPG++QFRG
Sbjct: 119 HRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRG 178
Query: 403 RRPFRPMRGFMPGIPF-----YAPYGYGRVPRFRRPMRYRPY 293
RR F P G+ PF Y+PYGYG+ PRFRRPMRY PY
Sbjct: 179 RR-FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219
>TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255674-3257746 REVERSE
Length = 218
Score = 233 bits (594), Expect = 9e-062
Identities = 118/163 (72%), Positives = 134/163 (82%), Gaps = 7/163 (4%)
Frame = -1
Query: 763 SLREMQAKAEKEMGADQDPSSAISSAE-KEEVDSRSIYFGNVDYACTPEEVQQHFQSCGT 587
+LREMQAK EKEMGA QDP+S ++ E KEEVD+RS+Y GNVDYACTPEEVQ HFQ+CGT
Sbjct: 55 ALREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGT 114
Query: 586 VNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFR 407
VNRVTIL DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+Q+
Sbjct: 115 VNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYH 174
Query: 406 GRRPFRPMRGF---MPGIP--FYAPYGYGRVPRFRRPMRYRPY 293
R F P G+ P +P FY+PYGYG+ PRFRRPMRY PY
Sbjct: 175 PGR-FNPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216
>TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255808-3257746 REVERSE
Length = 203
Score = 208 bits (527), Expect = 5e-054
Identities = 107/149 (71%), Positives = 122/149 (81%), Gaps = 7/149 (4%)
Frame = -1
Query: 763 SLREMQAKAEKEMGADQDPSSAISSAE-KEEVDSRSIYFGNVDYACTPEEVQQHFQSCGT 587
+LREMQAK EKEMGA QDP+S ++ E KEEVD+RS+Y GNVDYACTPEEVQ HFQ+CGT
Sbjct: 55 ALREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGT 114
Query: 586 VNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFR 407
VNRVTIL DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+Q+
Sbjct: 115 VNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYH 174
Query: 406 GRRPFRPMRGF---MPGIP--FYAPYGYG 335
R F P G+ P +P FY+PYGYG
Sbjct: 175 PGR-FNPSMGYRFRRPFVPPYFYSPYGYG 202
>TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr2:14898341-14899590
FORWARD
Length = 309
Score = 53 bits (126), Expect = 2e-007
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = -1
Query: 739 AEKEMGADQDPSSAISSAEKEEVD-SRSIYFGNVDYACTPEEVQQHFQSCGTVNRVTILT 563
AEKE AD++ S + E + + R ++ N+ ++ + ++ + F CGTVN V I+
Sbjct: 69 AEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIR 128
Query: 562 DKFGQPKGFAYVEFVEEDAVQNSL-ILNESELHGRQIKVSAKR 437
K G+ +GFA+V + Q ++ + ++ GR I VS R
Sbjct: 129 QKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFAR 171
>TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr4:8231179-8232785
FORWARD
Length = 412
Score = 51 bits (121), Expect = 6e-007
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = -1
Query: 757 REMQAKAEKEMGADQDPSSAISSAEKEEVDSRSIYFGNVDYACTPEEVQQHFQSCGTVNR 578
R M + ++ G + +++ SS ++ I+ G + T EE +Q+F+ G V
Sbjct: 79 RAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTD 138
Query: 577 VTILTDK-FGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKV 449
V I+ D+ +P+GF +V F EDAV + L +L G+Q++V
Sbjct: 139 VAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEV 182
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 50 bits (118), Expect = 1e-006
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = -1
Query: 661 SIYFGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEE-DAVQNSLI 488
S+ N+ C PEE+++ F+ G V V I D + GQP+GFA+VEFV+ DA +
Sbjct: 48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRS 107
Query: 487 LNESELHGRQIKV 449
+N GR+I V
Sbjct: 108 MNRRSFAGREITV 120
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 47 bits (111), Expect = 9e-006
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = -1
Query: 673 VDSRSIYFGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEEDAVQN 497
+ S I+ G + Y+ +++ F G V I+ D+ G+ +GFA+V F + N
Sbjct: 31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90
Query: 496 SLILNESELHGRQIKV--SAKRTNVPGMRQFRG 404
++ L+ +LHGR+I+V + +R + G R F G
Sbjct: 91 AMQLDGQDLHGRRIRVNYATERGSGFGGRGFGG 123
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,946,807,259
Number of Sequences: 33410
Number of Extensions: 32946807259
Number of Successful Extensions: 1108835660
Number of sequences better than 0.0: 0
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