BLASTX 7.6.2
Query= UN76449 /QuerySize=651
(650 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrola... 126 3e-027
gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hyd... 126 3e-027
gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hyd... 122 4e-026
gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hyd... 58 8e-007
>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19
[Arabidopsis thaliana]
Length = 672
Score = 126 bits (315), Expect = 3e-027
Identities = 78/124 (62%), Positives = 87/124 (70%), Gaps = 9/124 (7%)
Frame = +3
Query: 6 DGSAESSGVGTSGTGVSASLCNGIISHSEDHACKKESSSSVTV-TEKEREDVAERVDTVD 182
DGS ESSGVGT+ T VS SLCNGIISHSED +KESS S +V +E ++V +VDTVD
Sbjct: 508 DGSVESSGVGTNDTSVS-SLCNGIISHSEDPEYEKESSLSASVPVSEEGKEVDVKVDTVD 566
Query: 183 SESNPCIDMEHDR---QEEEEANGKEDPTVGNPA----CSDITTSSLSATTESNHREKED 341
SESN IDMEHD +EEEANGKEDPTV N A C DITT S SA TE +E E
Sbjct: 567 SESNRSIDMEHDSGTDHQEEEANGKEDPTVENLAVDSSCLDITTPSPSAATEFIPQENER 626
Query: 342 SDTE 353
SDTE
Sbjct: 627 SDTE 630
>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19
[Arabidopsis thaliana]
Length = 502
Score = 126 bits (315), Expect = 3e-027
Identities = 78/124 (62%), Positives = 87/124 (70%), Gaps = 9/124 (7%)
Frame = +3
Query: 6 DGSAESSGVGTSGTGVSASLCNGIISHSEDHACKKESSSSVTV-TEKEREDVAERVDTVD 182
DGS ESSGVGT+ T VS SLCNGIISHSED +KESS S +V +E ++V +VDTVD
Sbjct: 338 DGSVESSGVGTNDTSVS-SLCNGIISHSEDPEYEKESSLSASVPVSEEGKEVDVKVDTVD 396
Query: 183 SESNPCIDMEHDR---QEEEEANGKEDPTVGNPA----CSDITTSSLSATTESNHREKED 341
SESN IDMEHD +EEEANGKEDPTV N A C DITT S SA TE +E E
Sbjct: 397 SESNRSIDMEHDSGTDHQEEEANGKEDPTVENLAVDSSCLDITTPSPSAATEFIPQENER 456
Query: 342 SDTE 353
SDTE
Sbjct: 457 SDTE 460
>gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 650
Score = 122 bits (306), Expect = 4e-026
Identities = 81/145 (55%), Positives = 93/145 (64%), Gaps = 18/145 (12%)
Frame = +3
Query: 6 DGSAESSGVGTSGTGVSASLCNGIISHSEDHACKKES-----SSSVTVTEKEREDVAERV 170
DGS ESSGVG + T VS SLCNGIISHSED C KES S+SV V+E E ++V RV
Sbjct: 508 DGSVESSGVGANDTSVS-SLCNGIISHSEDPECGKESSLSSMSASVPVSE-EGKEVDARV 565
Query: 171 DTVDSESNPCIDMEHDR---QEEEEANGKEDPTVGNPA----CSDITTSSLSATTESNHR 329
DTVDSESNP IDMEHD +EE ANGKEDP N A CSDITT S SA T +
Sbjct: 566 DTVDSESNPSIDMEHDSGTDHQEEAANGKEDPAAENLAVDSSCSDITTLSPSAATVFIPQ 625
Query: 330 EKEDSDTEMIDNA**IQKDGEDQQM 404
E E SD+E ++K+ D +M
Sbjct: 626 ENEHSDSESKP----LEKEHSDTEM 646
>gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hydrolase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 618
Score = 58 bits (139), Expect = 8e-007
Identities = 46/118 (38%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +3
Query: 18 ESSGVGTSGTGVSASLCNGIISHSEDHACKKESSSSVTVTEKEREDVAERVDTVDSESNP 197
ESS VG + S + I + + SSSS +V E ERVDT+DSESNP
Sbjct: 502 ESSMVGAIESRSSTHVT--IEDPEREQSPSPSSSSSSSVLTSECCSEVERVDTLDSESNP 559
Query: 198 CIDMEHDRQEEEEANGKEDPTVGNPA---CSDITTSSLSATTESNHREKEDSDTEMID 362
D +E+ ANG DP V A CSD TS+ T+S + D DT+MID
Sbjct: 560 STDDSATDHQEDAANGNRDPEVKYQAVDSCSDPATSTPLVCTKSKPPVR-DMDTKMID 616
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 894,102,007,916
Number of Sequences: 15229318
Number of Extensions: 894102007916
Number of Successful Extensions: 260079705
Number of sequences better than 0.0: 0
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