BLASTX 7.6.2
Query= UN76610 /QuerySize=732
(731 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06140.1 | Symbols: | pentatricopeptide (PPR)... 354 5e-098
TAIR9_protein||AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo ... 111 8e-025
TAIR9_protein||AT3G03580.1 | Symbols: | pentatricopeptide (PPR)... 107 7e-024
TAIR9_protein||AT2G39620.1 | Symbols: | pentatricopeptide (PPR)... 106 3e-023
TAIR9_protein||AT4G39530.1 | Symbols: | pentatricopeptide (PPR)... 105 3e-023
TAIR9_protein||AT2G27610.1 | Symbols: | pentatricopeptide (PPR)... 103 2e-022
TAIR9_protein||AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL... 100 1e-021
TAIR9_protein||AT5G13230.1 | Symbols: | pentatricopeptide (PPR)... 99 3e-021
TAIR9_protein||AT4G14820.1 | Symbols: | pentatricopeptide (PPR)... 95 3e-020
TAIR9_protein||AT3G11460.1 | Symbols: | pentatricopeptide (PPR)... 94 8e-020
TAIR9_protein||AT2G13600.1 | Symbols: | pentatricopeptide (PPR)... 92 2e-019
TAIR9_protein||AT4G18520.1 | Symbols: | INVOLVED IN: biological... 91 5e-019
TAIR9_protein||AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespi... 89 3e-018
TAIR9_protein||AT3G02330.1 | Symbols: | pentatricopeptide (PPR)... 87 1e-017
TAIR9_protein||AT5G16860.1 | Symbols: | pentatricopeptide (PPR)... 86 2e-017
TAIR9_protein||AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular... 86 3e-017
TAIR9_protein||AT5G47460.1 | Symbols: | pentatricopeptide (PPR)... 83 1e-016
TAIR9_protein||AT3G14330.1 | Symbols: | pentatricopeptide (PPR)... 83 2e-016
TAIR9_protein||AT5G46460.1 | Symbols: | pentatricopeptide (PPR)... 82 4e-016
TAIR9_protein||AT5G39350.1 | Symbols: | pentatricopeptide (PPR)... 79 2e-015
>TAIR9_protein||AT1G06140.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:1864796-1866472 FORWARD
Length = 559
Score = 354 bits (906), Expect = 5e-098
Identities = 182/246 (73%), Positives = 207/246 (84%), Gaps = 5/246 (2%)
Frame = +1
Query: 4 MLPVNRTNALLTILTQIKALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAA 183
MLPVNR ALLTIL+Q K L+HTQQVH KVI HG E+EVVLGSSL N+YIQSNRLD A +
Sbjct: 1 MLPVNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATS 60
Query: 184 SFDRIPPRKRNRYSWNTILSGYSKSKN--HVEILRLYNRMRKYCNGVDSFNLVFAIKACV 357
SF+RIP KRNR+SWNTILSGYSKSK + ++L LYNRMR++C+GVDSFNLVFAIKACV
Sbjct: 61 SFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACV 120
Query: 358 GLGFLENGVLIHGLAMKCGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGV 537
GLG LENG+LIHGLAMK GLDKDDYVAPSLVEMYAQ G ME AQKVFDE+ +R+SVLWGV
Sbjct: 121 GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGV 180
Query: 538 LMKGYLRYSREREVFRLFYLMREACLGVDALALICLVKACGNVFAGREGSQCT--VYPSE 711
LMKGYL+YS++ EVFRLF LMR+ L +DAL LICLVKACGNVFAG+ G +C V
Sbjct: 181 LMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVG-KCVHGVSIRR 239
Query: 712 GFIEQS 729
FI+QS
Sbjct: 240 SFIDQS 245
>TAIR9_protein||AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)
| chr4:16290141-16292612 REVERSE
Length = 824
Score = 111 bits (275), Expect = 8e-025
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 19/239 (7%)
Frame = +1
Query: 1 GMLPVNRTNALLTILTQIKALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAA 180
G+ P RT ++L + + ++H + G +V + +SL + Y + + A
Sbjct: 148 GLTPDYRT--FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNAR 205
Query: 181 ASFDRIPPRKRNRYSWNTILSGYSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVG 360
FD +P R SWN ++SGY +S N E L L N +R +DS +V + AC
Sbjct: 206 ILFDEMPVRDMG--SWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTE 259
Query: 361 LGFLENGVLIHGLAMKCGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVL 540
G GV IH ++K GL+ + +V+ L+++YA+FG + D QKVFD M +R + W +
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 541 MKGYLRYSREREVFRLFYLMREACLGVDALALICL---------VKACGNV--FAGREG 684
+K Y + LF MR + + D L LI L ++AC +V F R+G
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
>TAIR9_protein||AT3G03580.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:860695-863343 REVERSE
Length = 883
Score = 107 bits (267), Expect = 7e-024
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Frame = +1
Query: 43 LTQIKALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRY 222
L+ L+ +++H VI+ GL+ L + Y + + F R+ P K N Y
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK-NVY 72
Query: 223 SWNTILSGYSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLA 402
WN+I+ +SK+ E L Y ++R+ D + IKAC GL E G L++
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 403 MKCGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVF 582
+ G + D +V +LV+MY++ G + A++VFDEM +R V W L+ GY + E
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 583 RLFYLMREACLGVDALALICLVKACGNVFAGREG 684
+++ ++ + + D+ + ++ A GN+ ++G
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>TAIR9_protein||AT2G39620.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:16518968-16521478 REVERSE
Length = 837
Score = 106 bits (262), Expect = 3e-023
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 9/210 (4%)
Frame = +1
Query: 31 LLTILTQIKALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRK 210
LL +L + K QVH +I GL+ + L N+Y R DL+ FD + R
Sbjct: 8 LLLMLRECKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSV--RD 61
Query: 211 RNRYSWNTILSGYSKSKNHVEILRLYNRMRKYCNGV--DSFNLVFAIKACVGLGFLENGV 384
WN+++ GY+++ H E L + M + G+ D ++ FA+KAC G + G+
Sbjct: 62 PGVVLWNSMIRGYTRAGLHREALGFFGYMSEE-KGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 385 LIHGLAMKCGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYS 564
IH L + GL+ D Y+ +LVEMY + + A++VFD+M ++ V W ++ G +
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 565 REREVFRLFYLMREACLGVDALALICLVKA 654
LF+ MR C+ +D ++L L+ A
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
>TAIR9_protein||AT4G39530.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:18374736-18377240 REVERSE
Length = 835
Score = 105 bits (261), Expect = 3e-023
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Frame = +1
Query: 25 NALLTILTQIKALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPP 204
+ +L+ + + L +Q+H ++ +GLE + L + L +SY++ R+ A F+ +P
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP- 311
Query: 205 RKRNRYSWNTILSGYSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGV 384
+N SW T+LSGY ++ H E + L+ M K+ D + + +C L L G
Sbjct: 312 -NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGT 370
Query: 385 LIHGLAMKCGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYS 564
+H +K L D YV SL++MYA+ + DA+KVFD VL+ +++GY R
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG 430
Query: 565 RE---REVFRLFYLMREACLGVDALALICLVKACGNV 666
+ E +F MR + L + L++A ++
Sbjct: 431 TQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
>TAIR9_protein||AT2G27610.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:11783927-11786533 REVERSE
Length = 869
Score = 103 bits (255), Expect = 2e-022
Identities = 55/198 (27%), Positives = 106/198 (53%), Gaps = 2/198 (1%)
Frame = +1
Query: 73 QQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNTILSGYS 252
+Q+H + I G ++V +G+SL ++Y++ + FD + ++RN +W T++SGY+
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM--KERNVVTWTTLISGYA 170
Query: 253 KSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCGLDKDDY 432
++ + E+L L+ RM+ +SF A+ G G+ +H + +K GLDK
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 433 VAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLFYLMREAC 612
V+ SL+ +Y + G + A+ +FD+ ++S V W ++ GY + E +FY MR
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 613 LGVDALALICLVKACGNV 666
+ + + ++K C N+
Sbjct: 291 VRLSESSFASVIKLCANL 308
>TAIR9_protein||AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 589
Score = 100 bits (247), Expect = 1e-021
Identities = 56/204 (27%), Positives = 105/204 (51%), Gaps = 2/204 (0%)
Frame = +1
Query: 73 QQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNTILSGYS 252
+ VH + G + +V +GSSL + Y + + A FD +P +RN +W+ ++ GY+
Sbjct: 136 RSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP--QRNVVTWSGMMYGYA 193
Query: 253 KSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCGLDKDDY 432
+ + E L L+ V+ ++ I C LE G IHGL++K D +
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 433 VAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLFYLMREAC 612
V SLV +Y++ G E A +VF+E+ +++ +W ++K Y ++S ++V LF M+ +
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 613 LGVDALALICLVKACGNVFAGREG 684
+ + + + ++ AC + EG
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEG 337
>TAIR9_protein||AT5G13230.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:4222514-4224982 FORWARD
Length = 823
Score = 99 bits (244), Expect = 3e-021
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 2/207 (0%)
Frame = +1
Query: 73 QQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNTILSGYS 252
+Q+H V+ G + ++ + ++L + Y + ++D A F + +N SWNT++ GY
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL--SSKNEVSWNTVIVGYE 425
Query: 253 KSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCGLDKDDY 432
+ ++ + V A+ AC L ++ GV +HGLA+K K
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 433 VAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLFYLMREAC 612
V+ SL++MYA+ G ++ AQ VF+EM W L+ GY + R+ R+ +M++
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 613 LGVDALALICLVKACGNVFAGREGSQC 693
+ L + ++ C N +G +C
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQEC 572
>TAIR9_protein||AT4G14820.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:8507794-8510038 REVERSE
Length = 723
Score = 95 bits (235), Expect = 3e-020
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 5/214 (2%)
Frame = +1
Query: 25 NALLTILTQIKALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAA--SFDRI 198
N +L L+ K+L+H +Q+H ++ + + L S L N + S+ ++L+ A F I
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINHK--LNSFLFNLSVSSSSINLSYALNVFSSI 70
Query: 199 PPRKRNRYSWNTILSGYSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLEN 378
P + +N L S+S + Y R+R +D F+ + +KA + L
Sbjct: 71 PSPPES-IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE 129
Query: 379 GVLIHGLAMKCGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLR 558
G+ +HG+A K D +V ++MYA G + A+ VFDEM+ R V W +++ Y R
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 559 YSREREVFRLFYLMREACLGVDALALICLVKACG 660
+ E F+LF M+++ + D + L +V ACG
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACG 223
>TAIR9_protein||AT3G11460.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:3608250-3610121 FORWARD
Length = 624
Score = 94 bits (232), Expect = 8e-020
Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 1/217 (0%)
Frame = +1
Query: 73 QQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNTILSGYS 252
QQ+H V G E E + ++L + Y + + A F+ P + +N ++SGY+
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 253 KSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCGLDKDDY 432
+ + ++ RM++ VDS ++ + C +L G +HG +K GLD +
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192
Query: 433 VAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLFYLMREAC 612
V S + MY + G +E +++FDEM ++ + W ++ GY + +V L+ M+ +
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
Query: 613 LGVDALALICLVKACGNVFAGREGSQC-TVYPSEGFI 720
+ D L+ ++ +C ++ A + G + + S GF+
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
>TAIR9_protein||AT2G13600.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:5671493-5673586 FORWARD
Length = 698
Score = 92 bits (228), Expect = 2e-019
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
Frame = +1
Query: 25 NALLTILTQIKALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPP 204
N L+ ++ +L +QV K+ + + +S+ + LD A + F +P
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKM----PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP- 113
Query: 205 RKRNRYSWNTILSGYSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGV 384
+R++ +WN+++SG+++ E L + M K ++ ++ + AC GL + GV
Sbjct: 114 -ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 385 LIHGLAMKCGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYS 564
+H L K D Y+ +LV+MY++ G + DAQ+VFDEM R+ V W L+ + +
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 565 REREVFRLFYLMREACLGVDALALICLVKACGNVFAGREGSQ 690
E +F +M E+ + D + L ++ AC ++ A + G +
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
>TAIR9_protein||AT4G18520.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth
stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein (TAIR:AT4G39530.1);
Has 16698 Blast hits to 4567 proteins in 114 species: Archae - 0;
Bacteria - 4; Metazoa - 97; Fungi - 32; Plants - 16266; Viruses - 0;
Other Eukaryotes - 299 (source: NCBI BLink). | chr4:10215250-10217103
REVERSE
Length = 618
Score = 91 bits (225), Expect = 5e-019
Identities = 58/214 (27%), Positives = 110/214 (51%), Gaps = 3/214 (1%)
Frame = +1
Query: 31 LLTILTQIKALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRK 210
LL + ++ +QVH ++ G+ +++ SSL Y Q L A +FD + +
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMM--EE 246
Query: 211 RNRYSWNTILSGYSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLI 390
++ SW ++S S+ + ++ + ++ M + + F + +KAC L G +
Sbjct: 247 KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV 306
Query: 391 HGLAMKCGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSRE 570
H L +K + D +V SL++MYA+ G + D +KVFD M+ R++V W ++ + R
Sbjct: 307 HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFG 366
Query: 571 REVFRLFYLMREACLGVDALALICLVKACGNVFA 672
E LF +M+ L + L ++ +++ACG+V A
Sbjct: 367 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
>TAIR9_protein||AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory
reduction 21) | chr5:22561941-22564433 REVERSE
Length = 831
Score = 89 bits (218), Expect = 3e-018
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Frame = +1
Query: 73 QQVHVKVIAHG--LEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNTILSG 246
+Q+H +++ +G + + L Y + + L++A F ++ R RN +SW I+
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKL--RVRNVFSWAAIIGV 147
Query: 247 YSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCGLDKD 426
+ L + M + D+F + KAC L + G +HG +K GL+
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 427 DYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLFYLMRE 606
+VA SL +MY + G ++DA KVFDE+ R++V W LM GY++ + E RLF MR+
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 607 ACLGVDALALICLVKACGNVFAGREGSQ 690
+ + + + A N+ EG Q
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQ 295
>TAIR9_protein||AT3G02330.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:473881-476592 REVERSE
Length = 862
Score = 87 bits (213), Expect = 1e-017
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Frame = +1
Query: 76 QVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNTILSGYSK 255
Q+H + + ++ ++ + Y + + + A FD NR S+N +++GYS+
Sbjct: 260 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN--SENLNRQSYNAMITGYSQ 317
Query: 256 SKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCGLDKDDYV 435
++ + L L++R+ G D +L +AC + L G+ I+GLA+K L D V
Sbjct: 318 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 377
Query: 436 APSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLFYLMREACL 615
A + ++MY + + +A +VFDEM R +V W ++ + + + E LF M + +
Sbjct: 378 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 437
Query: 616 GVDALALICLVKAC 657
D ++KAC
Sbjct: 438 EPDEFTFGSILKAC 451
>TAIR9_protein||AT5G16860.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:5543834-5546386 FORWARD
Length = 851
Score = 86 bits (211), Expect = 2e-017
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 4/222 (1%)
Frame = +1
Query: 55 KALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNT 234
K + + +H K+++ G+ + L S L ++YI L A + R PP Y WN+
Sbjct: 39 KTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 235 ILSGYSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCG 414
++ Y + + L L+ M D++ F KAC + + G H L++ G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 415 LDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLFY 594
+ +V +LV MY++ + DA+KVFDEM++ V W +++ Y + + + +F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 595 LM-REACLGVDALALICLVKACGNVFAGREGSQ--CTVYPSE 711
M E D + L+ ++ C ++ G Q C SE
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259
>TAIR9_protein||AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide (PPR)
repeat-containing protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 938
Score = 86 bits (210), Expect = 3e-017
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Frame = +1
Query: 61 LHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNTIL 240
L + +H +++ G E + + +SL Y + L + F+ + RN +WN +L
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD--NRNIITWNAML 537
Query: 241 SGYSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCGLD 420
+ + + E+L+L ++MR + +D F+ + A L LE G +HGLA+K G +
Sbjct: 538 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 597
Query: 421 KDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLFYLM 600
D ++ + +MY++ G + + K+ RS W +L+ R+ EV F+ M
Sbjct: 598 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 657
Query: 601 REACLGVDALALICLVKACGN 663
E + + + L+ AC +
Sbjct: 658 LEMGIKPGHVTFVSLLTACSH 678
>TAIR9_protein||AT5G47460.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:19252463-19254193 REVERSE
Length = 577
Score = 83 bits (204), Expect = 1e-016
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
Frame = +1
Query: 115 EVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNTILSGYSKSKNHVEILRLYNR 294
+ V + L +++++S + A +P N SWNTIL+GY S+ E + +
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMP--NPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 295 MRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCGLDKDDYVAPSLVEMYAQFGG 474
M D ++L + A L + G LIH A K GLD VA +L++MY++ G
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGM 370
Query: 475 MEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLF-YLMREACLGVDALALICLVK 651
++ A+ +F M ++ ++W ++ GY R E +LF L +E L D + L+
Sbjct: 371 LKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Query: 652 ACGN 663
C +
Sbjct: 431 VCSH 434
>TAIR9_protein||AT3G14330.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:4779688-4782451 REVERSE
Length = 711
Score = 83 bits (203), Expect = 2e-016
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 6/224 (2%)
Frame = +1
Query: 31 LLTILTQIKALHHTQQVHVKVIAH-GLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPR 207
LL K+LHH ++ ++ + L L S L + RLDLA FD +
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 208 K-RNRYSWNTILSGYSKSKNHVEILRLYNRMRKYCNGVD--SFNLVFAIKACVGLGFLEN 378
W + GYS++ + + L +Y M C+ ++ +F++ A+KACV L L
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDM--LCSFIEPGNFSISVALKACVDLKDLRV 254
Query: 379 GVLIHGLAMKCGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLR 558
G IH +K D V L+++Y + G +DA+KVFD M+ R+ V W L+ +
Sbjct: 255 GRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSK 314
Query: 559 YSREREVFRLFYLMREACLGVDALALICLVKACGNVFAGREGSQ 690
R E+F LF M+E +G L ++ AC V A G +
Sbjct: 315 KVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKE 358
>TAIR9_protein||AT5G46460.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:18840305-18842398 FORWARD
Length = 698
Score = 82 bits (200), Expect = 4e-016
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Frame = +1
Query: 130 SSLANSYIQSNRLDLAAASFDRIPPRKRNRYSWNTILSGYSKSKNHVEILRLYNRMRKYC 309
+S+ + Y+Q ++D A F ++P +N SW T++ G +++ E L L+ M + C
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMP--GKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 310 NGVDSFNLVFAIKACVGLGFLENGVLIHGLAMKCGLDKDDYVAPSLVEMYAQFGGMEDAQ 489
S I AC G+ +HGL +K G ++YV+ SL+ YA + D++
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 490 KVFDEMTLRSSVLWGVLMKGYLRYSREREVFRLF 591
KVFDE +W L+ GY + + +F
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIF 314
>TAIR9_protein||AT5G39350.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:15750929-15752962 FORWARD
Length = 678
Score = 79 bits (194), Expect = 2e-015
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
Frame = +1
Query: 49 QIKALHHTQQVHVKVIAHGLEEEVVLGSSLANSYIQSNRLDLAAASFDRIPPRKRNRYSW 228
++K++ VH +++ + + ++L Y+ ++++A FD + + R+ SW
Sbjct: 129 ELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM--KNRDVISW 186
Query: 229 NTILSGYSKSKNHVEILRLYNRMRKYCNGVDSFNLVFAIKACVGLGFLENGVLIHGLAMK 408
NT++SGY ++ + L +++ M +D +V + C L LE G +H L +
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE 246
Query: 409 CGLDKDDYVAPSLVEMYAQFGGMEDAQKVFDEMTLRSSVLWGVLMKGYLRYSREREVFRL 588
L V +LV MY + G M++A+ VFD M R + W ++ GY L
Sbjct: 247 KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL 306
Query: 589 FYLMREACLGVDALALICLVKACGNVFAGREG 684
LM+ + +A+ + LV CG+ +G
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,036,922,200
Number of Sequences: 33410
Number of Extensions: 33036922200
Number of Successful Extensions: 1114053961
Number of sequences better than 0.0: 0
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