BLASTX 7.6.2
Query= UN76745 /QuerySize=683
(682 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo ... 236 1e-062
TAIR9_protein||AT4G29060.2 | Symbols: emb2726 | emb2726 (embryo ... 236 1e-062
TAIR9_protein||AT5G30510.1 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOS... 57 9e-009
TAIR9_protein||AT3G11964.1 | Symbols: | RNA binding | chr3:3793... 55 3e-008
TAIR9_protein||AT5G14580.1 | Symbols: | polyribonucleotide nucl... 52 3e-007
TAIR9_protein||AT3G23700.1 | Symbols: | S1 RNA-binding domain-c... 49 3e-006
>TAIR9_protein||AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo defective
2726); RNA binding / translation elongation factor |
chr4:14317744-14321315 FORWARD
Length = 954
Score = 236 bits (600), Expect = 1e-062
Identities = 139/209 (66%), Positives = 154/209 (73%), Gaps = 19/209 (9%)
Frame = +1
Query: 100 MATVSPYSIISKAWLIPGAAFTVKKNDC-----FLPKAGQKQTPSSTQRLFLPLSTSLKL 264
MAT++P S IS AWLIPGA+FTVKK+DC F KAG KQ SSTQRL LPLSTSL+L
Sbjct: 1 MATITP-SSISNAWLIPGASFTVKKSDCSIKCSFSRKAG-KQILSSTQRLVLPLSTSLRL 58
Query: 265 FPT---QFVLHPRRSRAATGT-------DVVAATVEEQDSSPPPVADDAAPTTTTTTTTS 414
FPT QFVLHP R T D E++++ +D APT+ + T
Sbjct: 59 FPTHGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGTAR 118
Query: 415 QSRGRKSEMPAVKNEELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDV 594
GRKSEMPAVKNEELV GATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSD FVKDV
Sbjct: 119 P--GRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDV 176
Query: 595 ASVDTIGQEVKVRLVEADIDAKRISLTMR 681
+SV TIGQEVKVRLVEADI++KRISLTMR
Sbjct: 177 SSVVTIGQEVKVRLVEADIESKRISLTMR 205
>TAIR9_protein||AT4G29060.2 | Symbols: emb2726 | emb2726 (embryo defective
2726); RNA binding / translation elongation factor |
chr4:14317744-14321315 FORWARD
Length = 710
Score = 236 bits (600), Expect = 1e-062
Identities = 139/209 (66%), Positives = 154/209 (73%), Gaps = 19/209 (9%)
Frame = +1
Query: 100 MATVSPYSIISKAWLIPGAAFTVKKNDC-----FLPKAGQKQTPSSTQRLFLPLSTSLKL 264
MAT++P S IS AWLIPGA+FTVKK+DC F KAG KQ SSTQRL LPLSTSL+L
Sbjct: 1 MATITP-SSISNAWLIPGASFTVKKSDCSIKCSFSRKAG-KQILSSTQRLVLPLSTSLRL 58
Query: 265 FPT---QFVLHPRRSRAATGT-------DVVAATVEEQDSSPPPVADDAAPTTTTTTTTS 414
FPT QFVLHP R T D E++++ +D APT+ + T
Sbjct: 59 FPTHGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGTAR 118
Query: 415 QSRGRKSEMPAVKNEELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDV 594
GRKSEMPAVKNEELV GATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSD FVKDV
Sbjct: 119 P--GRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDV 176
Query: 595 ASVDTIGQEVKVRLVEADIDAKRISLTMR 681
+SV TIGQEVKVRLVEADI++KRISLTMR
Sbjct: 177 SSVVTIGQEVKVRLVEADIESKRISLTMR 205
>TAIR9_protein||AT5G30510.1 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOSOMAL PROTEIN
S1); RNA binding / structural constituent of ribosome |
chr5:11619262-11621223 REVERSE
Length = 417
Score = 57 bits (136), Expect = 9e-009
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 460 ELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDVASVDTIGQEVKVRLV 639
+L G+ G V++++P+GAF+D G +GL+HVSQ+S V D+A+V G +KV ++
Sbjct: 260 QLGIGSVVLGVVQSLKPYGAFIDIGGI-NGLLHVSQISHDRVSDIATVLQPGDTLKVMIL 318
Query: 640 EADIDAKRISLTMR 681
D D R+SL+ +
Sbjct: 319 SHDRDRGRVSLSTK 332
>TAIR9_protein||AT3G11964.1 | Symbols: | RNA binding | chr3:3793957-3806626
REVERSE
Length = 1897
Score = 55 bits (132), Expect = 3e-008
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Frame = +1
Query: 400 TTTTSQSRGR-KSEMPAVKNEELVAGATFTGKVRAIQPFGAFVDFG-AFTDGLVHVSQLS 573
T T + GR KSE +K +L G +G++R ++PFG F+D GL H+SQLS
Sbjct: 1412 TLKTVNAGGRPKSESYDLK--KLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHISQLS 1469
Query: 574 DTFVKDVASVDTIGQEVKVRLVEADIDAKRISLTMR 681
D +++V + G+ V+ ++++ D + KRISL M+
Sbjct: 1470 DDRMENVQARYKAGESVRAKILKLDEEKKRISLGMK 1505
>TAIR9_protein||AT5G14580.1 | Symbols: | polyribonucleotide
nucleotidyltransferase, putative | chr5:4697612-4703013 REVERSE
Length = 992
Score = 52 bits (123), Expect = 3e-007
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +1
Query: 430 KSEMPAVKNEELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDVASVDT 609
+ ++ + ELV G + G V +I+ +GAFV+F GL+H+S+LS V V+ V
Sbjct: 664 QEQVDFIIGRELVVGGVYKGTVSSIKEYGAFVEFPGGQQGLLHMSELSHEPVSKVSDVLD 723
Query: 610 IGQEVKVRLVEADI 651
IGQ + +E D+
Sbjct: 724 IGQCITTMCIETDV 737
>TAIR9_protein||AT3G23700.1 | Symbols: | S1 RNA-binding domain-containing
protein | chr3:8531689-8533742 REVERSE
Length = 393
Score = 49 bits (115), Expect = 3e-006
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Frame = +1
Query: 454 NEELVAGATFTGKVRAIQPFGAFV----DFGAF-TDGLVHVSQLSDTFVKDVASVDTIGQ 618
++ + G F G+V +++ +GAF+ D G + GLVHVS++S +V+DV V G
Sbjct: 190 SQNVNVGDVFNGRVGSVEDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGD 249
Query: 619 EVKVRLVEADIDAKRISLTMR 681
EV+V + D + RI+L+++
Sbjct: 250 EVRVIVTNIDKEKSRITLSIK 270
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,036,922,200
Number of Sequences: 33410
Number of Extensions: 33036922200
Number of Successful Extensions: 1114053961
Number of sequences better than 0.0: 0
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