BLASTX 7.6.2
Query= UN76805 /QuerySize=815
(814 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1 (PO... 392 2e-109
TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding p... 260 1e-069
TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding p... 247 1e-065
TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding p... 235 3e-062
TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotei... 53 2e-007
TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear r... 52 4e-007
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 47 1e-005
>TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1
(POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding /
protein binding | chr5:20779760-20781241 FORWARD
Length = 228
Score = 392 bits (1006), Expect = 2e-109
Identities = 196/223 (87%), Positives = 207/223 (92%), Gaps = 5/223 (2%)
Frame = +3
Query: 39 MTLNDEQEHEVYGGEIP-EEEGEMETDEYEEHVGEEEGAAAAGGDEELEPGSSSKDLEDM 215
M ++DEQEHEVYGGEIP EEEGEM+T+EYEEH GEE AA GDEELEPGSSS+DLEDM
Sbjct: 1 MPVHDEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEE---GAAAGDEELEPGSSSRDLEDM 57
Query: 216 KKRIKEIEEEAGALREMQAKAEKEMGADQDPSSAISSAEKEEVDSRSIYFGNVDYACTPE 395
KKRIKEIEEEAGALREMQAKAEK+MGA QDPS +S+AEKEEVDSRSIY GNVDYACTPE
Sbjct: 58 KKRIKEIEEEAGALREMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPE 117
Query: 396 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAK 575
EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQNSLILNESELHGRQIKVSAK
Sbjct: 118 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAK 177
Query: 576 RTNVPGMRQFRGK-RPFRPMRGFMPGIPFYAPYGYGRVPRFRR 701
RTNVPGMRQFRG+ RPFRPMRGFMPG+PFY PY YGRVPRFRR
Sbjct: 178 RTNVPGMRQFRGRGRPFRPMRGFMPGVPFYPPYAYGRVPRFRR 220
>TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:26080501-26082984 REVERSE
Length = 221
Score = 260 bits (662), Expect = 1e-069
Identities = 139/217 (64%), Positives = 165/217 (76%), Gaps = 16/217 (7%)
Frame = +3
Query: 66 EVYGGEIPEEEGEMETDEYEEHVGEEEGAAAAGGDEELEPGSSSKDLEDMKKRIKEIEEE 245
EVYGGEIP + GEM+ D E + + AAA D + K+L++MKKR+KE+E+E
Sbjct: 7 EVYGGEIP-DVGEMDGD--MEALNPDLDMAAADDD-------AVKELDEMKKRLKEMEDE 56
Query: 246 AGALREMQAKAEKEMGADQDPSSAISSAEKEEVDSRSIYFGNVDYACTPEEVQQHFQSCG 425
A ALREMQAK EKEMGA S A + A KEEVD+RS++ GNVDYACTPEEVQQHFQ+CG
Sbjct: 57 AAALREMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCG 116
Query: 426 TVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQF 605
TV+RVTILTDKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KV KRTNVPG++QF
Sbjct: 117 TVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQF 176
Query: 606 RGKRPFRPMRGFMPGIPF-----YAPYGYGRVPRFRR 701
RG+R F P G+ PF Y+PYGYG+ PRFRR
Sbjct: 177 RGRR-FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRR 212
>TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255674-3257746 REVERSE
Length = 218
Score = 247 bits (628), Expect = 1e-065
Identities = 132/210 (62%), Positives = 160/210 (76%), Gaps = 12/210 (5%)
Frame = +3
Query: 105 METDEYEEHVGE-EEGAAAAGGDEELEPGSSSKD----LEDMKKRIKEIEEEAGALREMQ 269
ME +E+E + GE E D +++ ++ +D L +MK+R+KE+EEEA ALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 270 AKAEKEMGADQDPSSAISSAE-KEEVDSRSIYFGNVDYACTPEEVQQHFQSCGTVNRVTI 446
AK EKEMGA QDP+S ++ E KEEVD+RS+Y GNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 447 LTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGKRPFR 626
L DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+Q+ R F
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR-FN 179
Query: 627 PMRGF---MPGIP--FYAPYGYGRVPRFRR 701
P G+ P +P FY+PYGYG+ PRFRR
Sbjct: 180 PSMGYRFRRPFVPPYFYSPYGYGKAPRFRR 209
>TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255808-3257746 REVERSE
Length = 203
Score = 235 bits (598), Expect = 3e-062
Identities = 127/203 (62%), Positives = 154/203 (75%), Gaps = 12/203 (5%)
Frame = +3
Query: 105 METDEYEEHVGE-EEGAAAAGGDEELEPGSSSKD----LEDMKKRIKEIEEEAGALREMQ 269
ME +E+E + GE E D +++ ++ +D L +MK+R+KE+EEEA ALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 270 AKAEKEMGADQDPSSAISSAE-KEEVDSRSIYFGNVDYACTPEEVQQHFQSCGTVNRVTI 446
AK EKEMGA QDP+S ++ E KEEVD+RS+Y GNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 447 LTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGKRPFR 626
L DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+Q+ R F
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR-FN 179
Query: 627 PMRGF---MPGIP--FYAPYGYG 680
P G+ P +P FY+PYGYG
Sbjct: 180 PSMGYRFRRPFVPPYFYSPYGYG 202
>TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr2:14898341-14899590
FORWARD
Length = 309
Score = 53 bits (126), Expect = 2e-007
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = +3
Query: 276 AEKEMGADQDPSSAISSAEKEEVD-SRSIYFGNVDYACTPEEVQQHFQSCGTVNRVTILT 452
AEKE AD++ S + E + + R ++ N+ ++ + ++ + F CGTVN V I+
Sbjct: 69 AEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIR 128
Query: 453 DKFGQPKGFAYVEFVEEDAVQNSL-ILNESELHGRQIKVSAKR 578
K G+ +GFA+V + Q ++ + ++ GR I VS R
Sbjct: 129 QKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFAR 171
>TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr4:8231179-8232785
FORWARD
Length = 412
Score = 52 bits (123), Expect = 4e-007
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +3
Query: 243 EAGALREMQAKAEKEMGADQDPSSAISSAEKEEVDSRSIYFGNVDYACTPEEVQQHFQSC 422
E R M + ++ G + +++ SS ++ I+ G + T EE +Q+F+
Sbjct: 74 EVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVY 133
Query: 423 GTVNRVTILTDK-FGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKV 566
G V V I+ D+ +P+GF +V F EDAV + L +L G+Q++V
Sbjct: 134 GPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEV 182
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 47 bits (111), Expect = 1e-005
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +3
Query: 342 VDSRSIYFGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEEDAVQN 518
+ S I+ G + Y+ +++ F G V I+ D+ G+ +GFA+V F + N
Sbjct: 31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90
Query: 519 SLILNESELHGRQIKV--SAKRTNVPGMRQFRG 611
++ L+ +LHGR+I+V + +R + G R F G
Sbjct: 91 AMQLDGQDLHGRRIRVNYATERGSGFGGRGFGG 123
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,134,703,226
Number of Sequences: 33410
Number of Extensions: 33134703226
Number of Successful Extensions: 1119327775
Number of sequences better than 0.0: 0
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