BLASTX 7.6.2
Query= UN76889 /QuerySize=854
(853 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O23212|U2A2A_ARATH Splicing factor U2af large subunit A OS=Ar... 188 7e-047
sp|Q8L716|U2A2B_ARATH Splicing factor U2af large subunit B OS=Ar... 171 7e-042
sp|Q9ZR40|U2A2B_NICPL Splicing factor U2af large subunit B OS=Ni... 168 4e-041
sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A OS=Ni... 168 6e-041
sp|Q2QZL4|U2A2B_ORYSJ Splicing factor U2af large subunit B OS=Or... 165 5e-040
sp|Q2QKB4|U2A2B_WHEAT Splicing factor U2af large subunit B OS=Tr... 162 3e-039
sp|Q2R0Q1|U2A2A_ORYSJ Splicing factor U2af large subunit A OS=Or... 159 4e-038
sp|Q2QKB3|U2A2A_WHEAT Splicing factor U2af large subunit A OS=Tr... 136 2e-031
sp|Q24562|U2AF2_DROME Splicing factor U2AF 50 kDa subunit OS=Dro... 87 1e-016
sp|P26368|U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit OS=Hom... 81 9e-015
sp|P26369|U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit OS=Mus... 80 1e-014
sp|P90727|U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit OS=Cae... 80 2e-014
sp|P90978|U2AF2_CAEEL Splicing factor U2AF 65 kDa subunit OS=Cae... 77 1e-013
>sp|O23212|U2A2A_ARATH Splicing factor U2af large subunit A OS=Arabidopsis
thaliana GN=U2AF65A PE=2 SV=2
Length = 573
Score = 188 bits (475), Expect = 7e-047
Identities = 93/108 (86%), Positives = 99/108 (91%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAFCVYQ+++VTDIACAALNGIKMGDKTLTVRRANQ M KPEQE+VL+HAQQQI
Sbjct: 398 NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQI 457
Query: 663 AFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
AFQ MLQPG VATTVVCLTQVV EDELRDDEE+ DIMEDMRQEGGKF
Sbjct: 458 AFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKF 505
Score = 86 bits (212), Expect = 2e-016
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = -2
Query: 279 FLKYGDTDGSSRARSGMNGRKFGGNQVVAVFYPEDKFDQGDYGA 148
FLKY DTDGS+RAR GMNGRKFGGN+VVAV+YPEDKF+QGDYGA
Sbjct: 530 FLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDYGA 573
>sp|Q8L716|U2A2B_ARATH Splicing factor U2af large subunit B OS=Arabidopsis
thaliana GN=U2AF65B PE=2 SV=2
Length = 589
Score = 171 bits (432), Expect = 7e-042
Identities = 84/108 (77%), Positives = 93/108 (86%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAFCVYQ+ +VTDIACAALNGIKMGDKTLTVRRA Q A+QPKPEQE VL++AQQQI
Sbjct: 414 NSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQI 473
Query: 663 AFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
A Q M QPG T +VCLTQVV D+LRDDEE+ +IMEDMRQEGGKF
Sbjct: 474 ALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKF 521
Score = 80 bits (195), Expect = 2e-014
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -2
Query: 279 FLKYGDTDGSSRARSGMNGRKFGGNQVVAVFYPEDKFDQGDY 154
FL+Y D DGSS+ARSGMNGRKFGGNQVVAV+YPEDK+ QGDY
Sbjct: 546 FLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 587
>sp|Q9ZR40|U2A2B_NICPL Splicing factor U2af large subunit B OS=Nicotiana
plumbaginifolia GN=U2AF65B PE=2 SV=1
Length = 573
Score = 168 bits (425), Expect = 4e-041
Identities = 82/108 (75%), Positives = 94/108 (87%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAFCVYQ+V+VTDIACAALNGIKMGDKTLTVRRANQ QPKPEQESVL+HAQQQI
Sbjct: 398 NSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQI 457
Query: 663 AFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
A Q MLQP +AT V+ LT+V++ DEL DDE+++DI+EDMR E GKF
Sbjct: 458 ALQRLMLQPATLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKF 505
Score = 71 bits (173), Expect = 7e-012
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -2
Query: 279 FLKYGDTDGSSRARSGMNGRKFGGNQVVAVFYPEDKFDQGDY 154
FL+Y D D SS+AR +NGRKFGGNQVVAVFYPE+KF +GDY
Sbjct: 530 FLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGDY 571
>sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A OS=Nicotiana
plumbaginifolia GN=U2AF65A PE=2 SV=1
Length = 555
Score = 168 bits (424), Expect = 6e-041
Identities = 82/108 (75%), Positives = 93/108 (86%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAFCVYQ+V+VTDIACAALNGIKMGDKTLTVRRANQ QP PEQESVL+HAQQQI
Sbjct: 380 NSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQI 439
Query: 663 AFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
A Q MLQPG +AT V+CLT+VV DEL DD++++DI+EDMR E KF
Sbjct: 440 ALQRFMLQPGALATKVLCLTEVVTVDELNDDDDYQDILEDMRTECEKF 487
Score = 78 bits (190), Expect = 8e-014
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = -2
Query: 279 FLKYGDTDGSSRARSGMNGRKFGGNQVVAVFYPEDKFDQGDYGA 148
FL+Y D DGSS+AR G+NGRKFGGNQVVAVFYPE+KF +GDY A
Sbjct: 512 FLEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDYEA 555
>sp|Q2QZL4|U2A2B_ORYSJ Splicing factor U2af large subunit B OS=Oryza sativa
subsp. japonica GN=U2AF65B PE=2 SV=2
Length = 548
Score = 165 bits (416), Expect = 5e-040
Identities = 80/108 (74%), Positives = 92/108 (85%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAFCVYQ++ VTDIACAALNGIKMGDKTLTVRRANQ A QP+PEQES+L+ AQQQ+
Sbjct: 373 NSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQV 432
Query: 663 AFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
Q + Q G + T VVCLTQVV+ DEL+DDEE+EDIMEDMR E GK+
Sbjct: 433 QLQKLVYQVGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKY 480
Score = 65 bits (157), Expect = 5e-010
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = -2
Query: 279 FLKYGDTDGSSRARSGMNGRKFGGNQVVAVFYPEDKFDQGDYGA 148
FL+Y D DG+++A++ M+GRKFGGN VVAVFYPE+KF +Y A
Sbjct: 505 FLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPENKFSSAEYDA 548
>sp|Q2QKB4|U2A2B_WHEAT Splicing factor U2af large subunit B OS=Triticum aestivum
GN=U2AF65B PE=2 SV=1
Length = 543
Score = 162 bits (409), Expect = 3e-039
Identities = 78/108 (72%), Positives = 91/108 (84%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAFCVYQ++ VTDIACAALNGIKMGDKTLTVRRANQ + QP+PEQE++L+ AQQQ+
Sbjct: 366 NSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQPRPEQENILLQAQQQV 425
Query: 663 AFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
Q + Q G + T VVCLTQVV DEL+DDEE+EDIMEDMR E GK+
Sbjct: 426 QLQKLVYQVGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKY 473
Score = 66 bits (160), Expect = 2e-010
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2
Query: 279 FLKYGDTDGSSRARSGMNGRKFGGNQVVAVFYPEDKFDQGDYGA 148
FL+Y D DGS++A++ M+GRKFGGN VVAVFYPE+KF DY A
Sbjct: 498 FLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFADEDYDA 541
>sp|Q2R0Q1|U2A2A_ORYSJ Splicing factor U2af large subunit A OS=Oryza sativa
subsp. japonica GN=U2AF65A PE=2 SV=2
Length = 574
Score = 159 bits (400), Expect = 4e-038
Identities = 79/110 (71%), Positives = 92/110 (83%), Gaps = 2/110 (1%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAFCVYQ++ VTDIACAALNGIKMGDKTLTVRRANQ A QP+PEQES+L+H QQQ
Sbjct: 397 NSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQA 456
Query: 663 AFQVNMLQ--PGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
Q M Q G + T VVCLTQVV+ DELRDDEE+EDI++DMR+EG ++
Sbjct: 457 QMQKLMFQVGGGALPTKVVCLTQVVSPDELRDDEEYEDIVQDMREEGCRY 506
Score = 63 bits (152), Expect = 2e-009
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = -2
Query: 279 FLKYGDTDGSSRARSGMNGRKFGGNQVVAVFYPEDKFDQGDY 154
FL++ D + S++A++GM+GRKF NQVVAVFYPEDKF +G Y
Sbjct: 531 FLEFADVESSTKAKNGMHGRKFANNQVVAVFYPEDKFAEGQY 572
>sp|Q2QKB3|U2A2A_WHEAT Splicing factor U2af large subunit A OS=Triticum aestivum
GN=U2AF65A PE=2 SV=1
Length = 591
Score = 136 bits (341), Expect = 2e-031
Identities = 68/109 (62%), Positives = 88/109 (80%), Gaps = 2/109 (1%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAFC+Y++ VTDIACAALNGI++GD+TLTVRRANQ A +P+PEQE++L+ AQQ+
Sbjct: 431 NSKGYAFCLYKDGTVTDIACAALNGIQLGDRTLTVRRANQGA-EPRPEQENILLQAQQEA 489
Query: 663 AFQVNMLQPGPVATT-VVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
+ + + G TT VVCLTQVV+ D+LRDDEE+ DI+EDM EG K+
Sbjct: 490 QMKRLVYEVGRTLTTKVVCLTQVVSADDLRDDEEYNDILEDMTLEGHKY 538
>sp|Q24562|U2AF2_DROME Splicing factor U2AF 50 kDa subunit OS=Drosophila
melanogaster GN=U2af50 PE=1 SV=1
Length = 416
Score = 87 bits (214), Expect = 1e-016
Identities = 47/110 (42%), Positives = 73/110 (66%), Gaps = 8/110 (7%)
Frame = -2
Query: 840 SKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRAN---QEAMQPKPEQESVLMHAQQ 670
SKGYAFC Y ++++TD + A LNG+++GDK L V+RA+ + A +SV++
Sbjct: 247 SKGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVML---- 302
Query: 669 QIAFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
Q+ N++ GP T V+CL +V DELRD+EE+EDI+ED+++E K+
Sbjct: 303 QVPGLSNVVTSGP-PTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 351
>sp|P26368|U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit OS=Homo sapiens
GN=U2AF2 PE=1 SV=4
Length = 475
Score = 81 bits (198), Expect = 9e-015
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Frame = -2
Query: 840 SKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRA-----NQEAMQPKP--EQESVLM 682
SKGYAFC Y ++ VTD A A LNG+++GDK L V+RA N + P Q V +
Sbjct: 299 SKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSPPSTINQTPVTL 358
Query: 681 HAQQQIAFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKFAFGYKR 502
++ QV M G T V+CL +V +EL DDEE+E+I+ED+R E K+ K
Sbjct: 359 QVPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGL-VKS 414
Query: 501 IRAP 490
I P
Sbjct: 415 IEIP 418
>sp|P26369|U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit OS=Mus musculus
GN=U2af2 PE=1 SV=3
Length = 475
Score = 80 bits (197), Expect = 1e-014
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Frame = -2
Query: 840 SKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEA-------MQPKPEQESVLM 682
SKGYAFC Y ++ VTD A A LNG+++GDK L V+RA+ A + Q V +
Sbjct: 299 SKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTL 358
Query: 681 HAQQQIAFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKFAFGYKR 502
++ QV M G T V+CL +V +EL DDEE+E+I+ED+R E K+ K
Sbjct: 359 QVPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGL-VKS 414
Query: 501 IRAP 490
I P
Sbjct: 415 IEIP 418
>sp|P90727|U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis
briggsae GN=uaf-1 PE=3 SV=2
Length = 488
Score = 80 bits (196), Expect = 2e-014
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAF Y + +TD A A LNG+++GDK L V Q A + + L ++ I
Sbjct: 320 NSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVV----QLACANQTRHNTHLPNSASAI 375
Query: 663 AFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
A +++ Q AT ++CL +V EDELR DE++E+I+ED+R+E K+
Sbjct: 376 A-GIDLSQGAGRATEILCLMNMVTEDELRSDEDYEEILEDVREECSKY 422
>sp|P90978|U2AF2_CAEEL Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis
elegans GN=uaf-1 PE=1 SV=2
Length = 496
Score = 77 bits (189), Expect = 1e-013
Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Frame = -2
Query: 843 NSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQEAMQPKPEQESVLMHAQQQI 664
NSKGYAF Y + +TD A A LNG+++GDK L V Q A + + L ++ I
Sbjct: 329 NSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVV----QLACANQQRHNTNLPNSASAI 384
Query: 663 AFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKF 520
A +++ Q AT ++CL +V EDEL+ D+E+E+I+ED+R E K+
Sbjct: 385 A-GIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKY 431
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 249,981,154,389
Number of Sequences: 518415
Number of Extensions: 249981154389
Number of Successful Extensions: 1620631332
Number of sequences better than 0.0: 0
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