BLASTX 7.6.2
Query= UN77042 /QuerySize=499
(498 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297819938|ref|XP_002877852.1| hypothetical protein ARALYDRAFT... 92 1e-017
gi|334185929|ref|NP_190795.3| Transcription initiation factor II... 79 1e-013
gi|255587521|ref|XP_002534300.1| Transcription initiation factor... 73 9e-012
gi|115464811|ref|NP_001056005.1| Os05g0509900 [Oryza sativa Japo... 71 3e-011
gi|218197080|gb|EEC79507.1| hypothetical protein OsI_20575 [Oryz... 70 4e-011
gi|317106673|dbj|BAJ53176.1| JHL18I08.10 [Jatropha curcas] 70 8e-011
gi|326493564|dbj|BAJ85243.1| predicted protein [Hordeum vulgare ... 65 2e-009
gi|56785216|dbj|BAD82068.1| putative transcription initiation fa... 56 9e-007
gi|297720443|ref|NP_001172583.1| Os01g0772200 [Oryza sativa Japo... 56 9e-007
>gi|297819938|ref|XP_002877852.1| hypothetical protein ARALYDRAFT_348323
[Arabidopsis lyrata subsp. lyrata]
Length = 258
Score = 92 bits (227), Expect = 1e-017
Identities = 49/80 (61%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +3
Query: 48 TNLVERSMWLMKCPSLAAAASLKSLPLADDPHLPVAKVILSIDPLASVDDETKVGMELTL 227
T L +RSM LMK PSL A+SL+SLP DDP+ P AKVIL++D LA D+ETK MEL
Sbjct: 20 TGLADRSMLLMKAPSL-VASSLQSLPFPDDPYRPDAKVILNVDLLAPEDEETKFVMELAR 78
Query: 228 TEFGNIPKRYALDMSKDLSP 287
E GN+P+RY LDMSKD P
Sbjct: 79 AESGNMPRRYTLDMSKDFIP 98
>gi|334185929|ref|NP_190795.3| Transcription initiation factor IIF, beta subunit
[Arabidopsis thaliana]
Length = 269
Score = 79 bits (193), Expect = 1e-013
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Frame = +3
Query: 48 TNLVERSMWLMKCPSLAAAA-SLKSLP----LADDPHLPVAKVILSIDPLASVDDETKVG 212
T L ERSM LMK PSL A++ S P DDP+ P AKVIL +DPLA D+ T+
Sbjct: 25 TGLAERSMLLMKAPSLVASSLQSHSFPDDPYRPDDPYRPDAKVILGVDPLAHEDEGTQFV 84
Query: 213 MELTLTEFGNIPKRYALDMSKDLSP 287
MEL + GN+P+RY LDMSKD P
Sbjct: 85 MELARADSGNMPRRYTLDMSKDFIP 109
>gi|255587521|ref|XP_002534300.1| Transcription initiation factor IIF subunit
beta, putative [Ricinus communis]
Length = 278
Score = 73 bits (177), Expect = 9e-012
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Frame = +3
Query: 48 TNLVERSMWLMKCPSLAAAASLKSLPLA--DDPHLPVAKVILSIDPLASVDDET--KVGM 215
T E+++WLMKCP+L + SLK P + +DP P+AKVILSI+PL S DD + + M
Sbjct: 33 TARAEKAVWLMKCPAL-VSNSLKKNPSSPDNDPSRPIAKVILSINPLNSNDDNSSRQFTM 91
Query: 216 ELTLTEFGNIPKRYALDMSKDLSP 287
EL E GN PK Y++DMS+D P
Sbjct: 92 ELAGNESGNAPKSYSMDMSEDFIP 115
>gi|115464811|ref|NP_001056005.1| Os05g0509900 [Oryza sativa Japonica Group]
Length = 259
Score = 71 bits (172), Expect = 3e-011
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Frame = +3
Query: 48 TNLVERSMWLMKCPSLAAAASLKSLPLAD----DPHLPVAKVILSIDPLASVDDETKVGM 215
T ERS+WLMKCP + + A ++ +D +P+ VAKV+LS+D L S + + M
Sbjct: 10 TARAERSVWLMKCPPVVSHAWQGAVSSSDAAGSNPNPVVAKVVLSLDLLRSEEPSLQFKM 69
Query: 216 ELTLTEFGNIPKRYALDMSKDLSP-CLSSVSLRRKENCQEK 335
E+ T GN PK Y+L+MSKD P C+ S S + K +C+ K
Sbjct: 70 EMAQTNTGNTPKSYSLNMSKDFVPMCVFSESNQGKLSCEGK 110
>gi|218197080|gb|EEC79507.1| hypothetical protein OsI_20575 [Oryza sativa Indica
Group]
Length = 259
Score = 70 bits (171), Expect = 4e-011
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Frame = +3
Query: 48 TNLVERSMWLMKCPSLAA----AASLKSLPLADDPHLPVAKVILSIDPLASVDDETKVGM 215
T ERS+WLMKCP + + A S +P+ VAKV+LS+D L S + + M
Sbjct: 10 TARAERSVWLMKCPPVVSHAWQGAVSSSSAAGSNPNPVVAKVVLSLDLLRSEEPSLQFKM 69
Query: 216 ELTLTEFGNIPKRYALDMSKDLSP-CLSSVSLRRKENCQEK 335
E+ T GN PK Y+L+MSKD P C+ S S + K +C+ K
Sbjct: 70 EMAQTNTGNTPKSYSLNMSKDFVPMCVFSESNQGKLSCEGK 110
>gi|317106673|dbj|BAJ53176.1| JHL18I08.10 [Jatropha curcas]
Length = 262
Score = 70 bits (169), Expect = 8e-011
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +3
Query: 48 TNLVERSMWLMKCPSLAAAASLKSLPLADDPHLPVAKVILSIDPLASVDDET-KVGMELT 224
T +RS+WLMKCP L A S +S + D H PVAKV+LS+DPL S D + ME+
Sbjct: 17 TAKADRSVWLMKCP-LVVAKSWQSHASSSDSH-PVAKVVLSLDPLRSDDPSALQFTMEMA 74
Query: 225 LTEFGNIPKRYALDMSKDLSP 287
E GNIPK Y+L+M KD P
Sbjct: 75 GNEIGNIPKSYSLNMFKDFVP 95
>gi|326493564|dbj|BAJ85243.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 262
Score = 65 bits (157), Expect = 2e-009
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 6/102 (5%)
Frame = +3
Query: 48 TNLVERSMWLMKCPSLAAAASLKSLPLADD--PHLPVAKVILSIDPLASVDDETKVGMEL 221
T +RS+WLMKCP + + A + + D P+ VAKV+LS+DPL+S + + ME+
Sbjct: 10 TARADRSVWLMKCPPVVSQAWQGASASSGDANPNPVVAKVVLSLDPLSSAEPSLQFKMEM 69
Query: 222 TLTEFG---NIPKRYALDMSKDLSP-CLSSVSLRRKENCQEK 335
+ T N+PK Y+L+M KD P C+ S + + K +C+ K
Sbjct: 70 SQTSVASTCNLPKSYSLNMFKDFVPMCVFSETNQGKLSCEGK 111
>gi|56785216|dbj|BAD82068.1| putative transcription initiation factor IIF beta
subunit [Oryza sativa Japonica Group]
Length = 277
Score = 56 bits (134), Expect = 9e-007
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 135 DPHLPVAKVILSIDPLASVDDETKVGMELTLTEFGNIPKRYALDMSKDLSP-CLSSVSLR 311
+P+ VAKVI+S+DPL S D + + ME+ T GN PK Y+L+M KD P C+ S S +
Sbjct: 57 NPNPVVAKVIVSLDPLRSEDQQLQFKMEMAQTGNGNTPKSYSLNMFKDFVPMCVFSESNQ 116
Query: 312 RKENCQEK 335
K +C+ K
Sbjct: 117 GKLSCEGK 124
>gi|297720443|ref|NP_001172583.1| Os01g0772200 [Oryza sativa Japonica Group]
Length = 138
Score = 56 bits (134), Expect = 9e-007
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 135 DPHLPVAKVILSIDPLASVDDETKVGMELTLTEFGNIPKRYALDMSKDLSP-CLSSVSLR 311
+P+ VAKVI+S+DPL S D + + ME+ T GN PK Y+L+M KD P C+ S S +
Sbjct: 57 NPNPVVAKVIVSLDPLRSEDQQLQFKMEMAQTGNGNTPKSYSLNMFKDFVPMCVFSESNQ 116
Query: 312 RKENCQEK 335
K +C+ K
Sbjct: 117 GKLSCEGK 124
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 993,394,655,336
Number of Sequences: 15229318
Number of Extensions: 993394655336
Number of Successful Extensions: 279802528
Number of sequences better than 0.0: 0
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