BLASTX 7.6.2
Query= UN77379 /QuerySize=680
(679 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo ... 225 3e-059
TAIR9_protein||AT4G29060.2 | Symbols: emb2726 | emb2726 (embryo ... 225 3e-059
TAIR9_protein||AT5G14580.1 | Symbols: | polyribonucleotide nucl... 49 3e-006
TAIR9_protein||AT5G30510.1 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOS... 48 4e-006
>TAIR9_protein||AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo defective
2726); RNA binding / translation elongation factor |
chr4:14317744-14321315 FORWARD
Length = 954
Score = 225 bits (571), Expect = 3e-059
Identities = 136/191 (71%), Positives = 144/191 (75%), Gaps = 27/191 (14%)
Frame = +1
Query: 103 MATVSPSSIISKAWLIPGAAFTVKNNDC-----FSPKAGLNQTPSSTQRLFLSLSTSLKL 267
MAT++PSS IS AWLIPGA+FTVK +DC FS KAG Q SSTQRL L LSTSL+L
Sbjct: 1 MATITPSS-ISNAWLIPGASFTVKKSDCSIKCSFSRKAG-KQILSSTQRLVLPLSTSLRL 58
Query: 268 FPT---QFVLHPRRSRAATGTEAVATVEEQDSPPPVAD----------DAAPTTSQSR-- 402
FPT QFVLHP R ATGT+ VA VEEQDS P VA+ DA TSQSR
Sbjct: 59 FPTHGRQFVLHPH--RRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGT 116
Query: 403 ---GRKSGMPAVKNEELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDV 573
GRKS MPAVKNEELV GATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSD FVKDV
Sbjct: 117 ARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDV 176
Query: 574 ASVVTIGQEVK 606
+SVVTIGQEVK
Sbjct: 177 SSVVTIGQEVK 187
>TAIR9_protein||AT4G29060.2 | Symbols: emb2726 | emb2726 (embryo defective
2726); RNA binding / translation elongation factor |
chr4:14317744-14321315 FORWARD
Length = 710
Score = 225 bits (571), Expect = 3e-059
Identities = 136/191 (71%), Positives = 144/191 (75%), Gaps = 27/191 (14%)
Frame = +1
Query: 103 MATVSPSSIISKAWLIPGAAFTVKNNDC-----FSPKAGLNQTPSSTQRLFLSLSTSLKL 267
MAT++PSS IS AWLIPGA+FTVK +DC FS KAG Q SSTQRL L LSTSL+L
Sbjct: 1 MATITPSS-ISNAWLIPGASFTVKKSDCSIKCSFSRKAG-KQILSSTQRLVLPLSTSLRL 58
Query: 268 FPT---QFVLHPRRSRAATGTEAVATVEEQDSPPPVAD----------DAAPTTSQSR-- 402
FPT QFVLHP R ATGT+ VA VEEQDS P VA+ DA TSQSR
Sbjct: 59 FPTHGRQFVLHPH--RRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGT 116
Query: 403 ---GRKSGMPAVKNEELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDV 573
GRKS MPAVKNEELV GATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSD FVKDV
Sbjct: 117 ARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDV 176
Query: 574 ASVVTIGQEVK 606
+SVVTIGQEVK
Sbjct: 177 SSVVTIGQEVK 187
>TAIR9_protein||AT5G14580.1 | Symbols: | polyribonucleotide
nucleotidyltransferase, putative | chr5:4697612-4703013 REVERSE
Length = 992
Score = 49 bits (114), Expect = 3e-006
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 439 ELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDVASVVTIGQ 597
ELV G + G V +I+ +GAFV+F GL+H+S+LS V V+ V+ IGQ
Sbjct: 674 ELVVGGVYKGTVSSIKEYGAFVEFPGGQQGLLHMSELSHEPVSKVSDVLDIGQ 726
>TAIR9_protein||AT5G30510.1 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOSOMAL PROTEIN
S1); RNA binding / structural constituent of ribosome |
chr5:11619262-11621223 REVERSE
Length = 417
Score = 48 bits (113), Expect = 4e-006
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 439 ELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDVASVVTIGQEVK 606
+L G+ G V++++P+GAF+D G +GL+HVSQ+S V D+A+V+ G +K
Sbjct: 260 QLGIGSVVLGVVQSLKPYGAFIDIGGI-NGLLHVSQISHDRVSDIATVLQPGDTLK 314
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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