BLASTX 7.6.2
Query= UN77443 /QuerySize=775
(774 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297796859|ref|XP_002866314.1| DNA-directed RNA polymerase II ... 82 6e-014
gi|224056563|ref|XP_002298912.1| predicted protein [Populus tric... 82 1e-013
gi|15237831|ref|NP_200726.1| DNA-directed RNA polymerase II subu... 81 1e-013
gi|255558950|ref|XP_002520498.1| DNA-directed RNA polymerase II ... 81 1e-013
gi|1173137|sp|P46279.1|RPB7_SOYBN RecName: Full=DNA-directed RNA... 80 3e-013
gi|217071674|gb|ACJ84197.1| unknown [Medicago truncatula] 80 3e-013
gi|326496519|dbj|BAJ94721.1| predicted protein [Hordeum vulgare ... 74 2e-011
gi|225434800|ref|XP_002282298.1| PREDICTED: hypothetical protein... 74 2e-011
gi|326497319|dbj|BAK02244.1| predicted protein [Hordeum vulgare ... 70 2e-010
gi|115463767|ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japo... 70 3e-010
gi|111140005|gb|ABH06364.1| RNA polymerase II [Sorbus aucuparia] 70 3e-010
gi|226500588|ref|NP_001149597.1| DNA-directed RNA polymerase II ... 70 3e-010
gi|302754896|ref|XP_002960872.1| hypothetical protein SELMODRAFT... 65 1e-008
gi|168056096|ref|XP_001780058.1| predicted protein [Physcomitrel... 63 5e-008
gi|255073033|ref|XP_002500191.1| predicted protein [Micromonas s... 55 1e-005
>gi|297796859|ref|XP_002866314.1| DNA-directed RNA polymerase II [Arabidopsis
lyrata subsp. lyrata]
Length = 176
Score = 82 bits (202), Expect = 6e-014
Identities = 38/38 (100%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 38
>gi|224056563|ref|XP_002298912.1| predicted protein [Populus trichocarpa]
Length = 176
Score = 82 bits (200), Expect = 1e-013
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPRFFGRNLREN+VSKLMKDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLRENIVSKLMKDVEGTC 38
>gi|15237831|ref|NP_200726.1| DNA-directed RNA polymerase II subunit RPB7
[Arabidopsis thaliana]
Length = 176
Score = 81 bits (199), Expect = 1e-013
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPRFFGRNL+ENLVSKLMKDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLKENLVSKLMKDVEGTC 38
>gi|255558950|ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD
polypeptide rpb7, putative [Ricinus communis]
Length = 176
Score = 81 bits (199), Expect = 1e-013
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPR+FGRNLRENLVSKLMKDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTC 38
>gi|1173137|sp|P46279.1|RPB7_SOYBN RecName: Full=DNA-directed RNA polymerase II
subunit RPB7; Short=RNA polymerase II subunit B7
Length = 176
Score = 80 bits (196), Expect = 3e-013
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPR+FGRNLR+NLVSKLMKDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTC 38
>gi|217071674|gb|ACJ84197.1| unknown [Medicago truncatula]
Length = 176
Score = 80 bits (196), Expect = 3e-013
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPR+FGRNLR+NLVSKLMKDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTC 38
>gi|326496519|dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 236
Score = 74 bits (181), Expect = 2e-011
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2
Query: 140 ERERRRMFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
E E MFFHIVLERNMQLHPR FG +LR+ LV+KLMKDVEGTC
Sbjct: 54 EEEEEEMFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTC 97
>gi|225434800|ref|XP_002282298.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 176
Score = 74 bits (180), Expect = 2e-011
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPR FGR+LR+NLV+KL+KDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTC 38
>gi|326497319|dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 177
Score = 70 bits (171), Expect = 2e-010
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPR FG +LR+ LV+KLMKDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTC 38
>gi|115463767|ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
Length = 177
Score = 70 bits (170), Expect = 3e-010
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPR FG +LR+ LVSKL+KDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTC 38
>gi|111140005|gb|ABH06364.1| RNA polymerase II [Sorbus aucuparia]
Length = 110
Score = 70 bits (170), Expect = 3e-010
Identities = 33/34 (97%)
Frame = +2
Query: 170 IVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
IVLERNMQLHPR FGRNLRENLVSKLMKDVEGTC
Sbjct: 1 IVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTC 34
>gi|226500588|ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa
polypeptide [Zea mays]
Length = 177
Score = 70 bits (170), Expect = 3e-010
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHIVLERNMQLHPR FG +LR+ LVSKL+KDVEGTC
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTC 38
>gi|302754896|ref|XP_002960872.1| hypothetical protein SELMODRAFT_75793
[Selaginella moellendorffii]
Length = 177
Score = 65 bits (156), Expect = 1e-008
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHI LERN+QLHPRFFG LR+ LV KL+ DVEGTC
Sbjct: 1 MFFHIRLERNLQLHPRFFGPQLRDKLVEKLIHDVEGTC 38
>gi|168056096|ref|XP_001780058.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 177
Score = 63 bits (151), Expect = 5e-008
Identities = 26/38 (68%), Positives = 34/38 (89%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MFFHI L+RN+QLHPR FG +LR+ L++KL++DVEGTC
Sbjct: 1 MFFHIYLDRNLQLHPRHFGPHLRDKLIAKLIQDVEGTC 38
>gi|255073033|ref|XP_002500191.1| predicted protein [Micromonas sp. RCC299]
Length = 185
Score = 55 bits (131), Expect = 1e-005
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +2
Query: 158 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTC 271
MF+HI LERN+ L PRFFGRN+R+ L+ +L +VEG+C
Sbjct: 1 MFWHIKLERNIVLEPRFFGRNMRDTLMQRLKHEVEGSC 38
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 993,394,655,336
Number of Sequences: 15229318
Number of Extensions: 993394655336
Number of Successful Extensions: 279802528
Number of sequences better than 0.0: 0
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