Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN77823


BLASTX 7.6.2

Query= UN77823 /QuerySize=746
        (745 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G09920.1 | Symbols: RPB15.9, ATRPB15.9, RPB15....    152   3e-037

>TAIR9_protein||AT5G09920.1 | Symbols: RPB15.9, ATRPB15.9, RPB15.9.9, NRPB4 |
        NRPB4; DNA-directed RNA polymerase | chr5:3096276-3097370 FORWARD

          Length = 139

 Score =  152 bits (382), Expect = 3e-037
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = +2

Query:  83 EEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQYVK 262
           EEEENAAELKIGDEFLKAKCLMNCEVSLILEHK+EQLQQ+SEDPMNQVSQVFEKSLQYVK
Sbjct:   4 EEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQISEDPMNQVSQVFEKSLQYVK 63

Query: 263 RFSRYKNPDAVRQVRE 310
           RFSRYKNPDAVRQVRE
Sbjct:  64 RFSRYKNPDAVRQVRE 79


 Score =  109 bits (270), Expect = 3e-024
 Identities = 53/56 (94%), Positives = 54/56 (96%)
 Frame = +2

Query: 485 ILSRHQLTEFELCVLGNLCPETAEEAVAMVPSLKTKGRAHSDEAIEKMLNDLSLVR 652
           ILSRHQLTEFELCVLGNLCPET EEAVAMVPSLKTKGRAH DEAIEKMLNDLSLV+
Sbjct:  80 ILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDEAIEKMLNDLSLVK 135

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0