BLASTX 7.6.2
Query= UN77962 /QuerySize=688
(687 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G36160.1 | Symbols: | 40S ribosomal protein S... 131 5e-031
TAIR9_protein||AT3G11510.1 | Symbols: | 40S ribosomal protein S... 131 5e-031
TAIR9_protein||AT3G52580.1 | Symbols: | 40S ribosomal protein S... 129 2e-030
>TAIR9_protein||AT2G36160.1 | Symbols: | 40S ribosomal protein S14 (RPS14A) |
chr2:15169925-15171159 FORWARD
Length = 151
Score = 131 bits (328), Expect = 5e-031
Identities = 64/72 (88%), Positives = 67/72 (93%)
Frame = +1
Query: 415 VSRRCKELGITSMHVKLRATGGNKTKTPGAGAQSALRALARPGMKIGRTEDVTPIPTDST 594
V++RCKELGIT+MHVKLRATGGNKTKTPG GAQSALRALAR GMKIGR EDVTPIPTDST
Sbjct: 80 VAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139
Query: 595 RRKSGRRGRRL* 630
RRK GRRGRRL*
Sbjct: 140 RRKGGRRGRRL* 151
>TAIR9_protein||AT3G11510.1 | Symbols: | 40S ribosomal protein S14 (RPS14B) |
chr3:3623757-3624866 REVERSE
Length = 151
Score = 131 bits (328), Expect = 5e-031
Identities = 64/72 (88%), Positives = 67/72 (93%)
Frame = +1
Query: 415 VSRRCKELGITSMHVKLRATGGNKTKTPGAGAQSALRALARPGMKIGRTEDVTPIPTDST 594
V++RCKELGIT+MHVKLRATGGNKTKTPG GAQSALRALAR GMKIGR EDVTPIPTDST
Sbjct: 80 VAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139
Query: 595 RRKSGRRGRRL* 630
RRK GRRGRRL*
Sbjct: 140 RRKGGRRGRRL* 151
>TAIR9_protein||AT3G52580.1 | Symbols: | 40S ribosomal protein S14 (RPS14C) |
chr3:19503324-19504701 FORWARD
Length = 151
Score = 129 bits (324), Expect = 2e-030
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +1
Query: 415 VSRRCKELGITSMHVKLRATGGNKTKTPGAGAQSALRALARPGMKIGRTEDVTPIPTDST 594
V++RCKELGIT++HVKLRATGGNKTKTPG GAQSALRALAR GMKIGR EDVTPIPTDST
Sbjct: 80 VAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139
Query: 595 RRKSGRRGRRL* 630
RRK GRRGRRL*
Sbjct: 140 RRKGGRRGRRL* 151
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|