Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN78097


BLASTX 7.6.2

Query= UN78097 /QuerySize=547
        (546 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297806871|ref|XP_002871319.1| hypothetical protein ARALYDRAFT...    186   1e-045
gi|15241596|ref|NP_196450.1| transcription factor TCP21 [Arabido...    186   2e-045
gi|297808329|ref|XP_002872048.1| hypothetical protein ARALYDRAFT...    121   5e-026
gi|26452377|dbj|BAC43274.1| unknown protein [Arabidopsis thaliana]     120   1e-025
gi|15237274|ref|NP_197719.1| transcription factor TCP7 [Arabidop...    120   1e-025
gi|83032232|gb|ABB97033.1| unknown [Brassica rapa]                     114   8e-024
gi|224083882|ref|XP_002307157.1| predicted protein [Populus tric...    106   2e-021
gi|255575966|ref|XP_002528879.1| transcription factor, putative ...    102   4e-020
gi|224096516|ref|XP_002310642.1| predicted protein [Populus tric...     96   2e-018
gi|302399087|gb|ADL36838.1| TCP domain class transcription facto...     95   4e-018
gi|225462562|ref|XP_002268058.1| PREDICTED: hypothetical protein...     94   1e-017

>gi|297806871|ref|XP_002871319.1| hypothetical protein ARALYDRAFT_908782
        [Arabidopsis lyrata subsp. lyrata]

          Length = 240

 Score =  186 bits (472), Expect = 1e-045
 Identities = 97/115 (84%), Positives = 101/115 (87%), Gaps = 5/115 (4%)
 Frame = +3

Query:   3 AGVVGGGGGLTVGHTMGASLVSG---GGFWAVPARQDFGQVWSF-AGAPPEMLFAQQQQP 170
           +G  GGGGGLTVGHTMG SL+ G   GGFWAVPAR DFGQVWSF AGAPPEM+FAQQQQP
Sbjct: 120 SGGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSFAAGAPPEMVFAQQQQP 179

Query: 171 ATLFVRHQQQQQ-QQASAAAMGEASAARVGNYLPGHHLNLLASLSGGNTGSGRRE 332
           ATLFVRHQQQQQ   A+AAAMGEASAARVGNYLPGHHLNLLASLSGG  GSGRRE
Sbjct: 180 ATLFVRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGGANGSGRRE 234

>gi|15241596|ref|NP_196450.1| transcription factor TCP21 [Arabidopsis thaliana]

          Length = 239

 Score =  186 bits (471), Expect = 2e-045
 Identities = 96/111 (86%), Positives = 99/111 (89%), Gaps = 5/111 (4%)
 Frame = +3

Query:  15 GGGGGLTVGHTMGASLVSG---GGFWAVPARQDFGQVWSFA-GAPPEMLFAQQQQPATLF 182
           GGGGGLTVGHTMG SL+ G   GGFWAVPAR DFGQVWSFA GAPPEM+FAQQQQPATLF
Sbjct: 123 GGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSFATGAPPEMVFAQQQQPATLF 182

Query: 183 VRHQQQQQ-QQASAAAMGEASAARVGNYLPGHHLNLLASLSGGNTGSGRRE 332
           VRHQQQQQ   A+AAAMGEASAARVGNYLPGHHLNLLASLSGG  GSGRRE
Sbjct: 183 VRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGGANGSGRRE 233

>gi|297808329|ref|XP_002872048.1| hypothetical protein ARALYDRAFT_489189
        [Arabidopsis lyrata subsp. lyrata]

          Length = 243

 Score =  121 bits (303), Expect = 5e-026
 Identities = 68/86 (79%), Positives = 69/86 (80%), Gaps = 7/86 (8%)
 Frame = +3

Query:  75 GFWAVPARQDFGQVWSFAGAPPEMLFAQQQQPATLFVRHQQQQQQQASAAAMGEASAARV 254
           GFWAVPAR DFGQVWSF GAP EM F QQ     LFV HQQQQQQ    AAMGEASAARV
Sbjct: 161 GFWAVPARPDFGQVWSFTGAPQEM-FLQQHHQQPLFV-HQQQQQQ----AAMGEASAARV 214

Query: 255 GNYLPGHHLNLLASLSGGNTGSGRRE 332
           GNYLPG HLNLLASLSGG+ GSGRRE
Sbjct: 215 GNYLPG-HLNLLASLSGGSPGSGRRE 239

>gi|26452377|dbj|BAC43274.1| unknown protein [Arabidopsis thaliana]

          Length = 250

 Score =  120 bits (299), Expect = 1e-025
 Identities = 70/89 (78%), Positives = 71/89 (79%), Gaps = 11/89 (12%)
 Frame = +3

Query:  75 GFWAVPARQDFGQVWSFAGAPPEMLFAQQ---QQPATLFVRHQQQQQQQASAAAMGEASA 245
           GFWAVPAR DFGQVWSFAGAP EM   QQ   QQP  LFV HQQQQQQ    AAMGEASA
Sbjct: 166 GFWAVPARPDFGQVWSFAGAPQEMFLQQQHHHQQP--LFV-HQQQQQQ----AAMGEASA 218

Query: 246 ARVGNYLPGHHLNLLASLSGGNTGSGRRE 332
           ARVGNYLPG HLNLLASLSGG+ GS RRE
Sbjct: 219 ARVGNYLPG-HLNLLASLSGGSPGSDRRE 246

>gi|15237274|ref|NP_197719.1| transcription factor TCP7 [Arabidopsis thaliana]

          Length = 250

 Score =  120 bits (299), Expect = 1e-025
 Identities = 70/89 (78%), Positives = 71/89 (79%), Gaps = 11/89 (12%)
 Frame = +3

Query:  75 GFWAVPARQDFGQVWSFAGAPPEMLFAQQ---QQPATLFVRHQQQQQQQASAAAMGEASA 245
           GFWAVPAR DFGQVWSFAGAP EM   QQ   QQP  LFV HQQQQQQ    AAMGEASA
Sbjct: 166 GFWAVPARPDFGQVWSFAGAPQEMFLQQQHHHQQP--LFV-HQQQQQQ----AAMGEASA 218

Query: 246 ARVGNYLPGHHLNLLASLSGGNTGSGRRE 332
           ARVGNYLPG HLNLLASLSGG+ GS RRE
Sbjct: 219 ARVGNYLPG-HLNLLASLSGGSPGSDRRE 246

>gi|83032232|gb|ABB97033.1| unknown [Brassica rapa]

          Length = 249

 Score =  114 bits (284), Expect = 8e-024
 Identities = 73/111 (65%), Positives = 76/111 (68%), Gaps = 18/111 (16%)
 Frame = +3

Query:  18 GGGGLTVGHTMGASLVSGGGFWAVPARQDFGQVWSFAGAPPEMLFAQQQQ------PATL 179
           GGG   +G     S  +  GFWAVPAR DFGQVWSFA +  EM   QQQQ       A L
Sbjct: 147 GGGKDEMG-----SFATPAGFWAVPARPDFGQVWSFA-SHQEMFLQQQQQQQQQPAAAAL 200

Query: 180 FVRHQQQQQQQASAAAMGEASAARVGNYLPGHHLNLLASLSGGNTGSGRRE 332
           FV HQQQQQQ    AAMGEASAARVGNYLPG HLNLLASLSGG  GSGRRE
Sbjct: 201 FV-HQQQQQQ----AAMGEASAARVGNYLPG-HLNLLASLSGGAPGSGRRE 245

>gi|224083882|ref|XP_002307157.1| predicted protein [Populus trichocarpa]

          Length = 272

 Score =  106 bits (263), Expect = 2e-021
 Identities = 63/111 (56%), Positives = 75/111 (67%), Gaps = 16/111 (14%)
 Frame = +3

Query:  24 GGLTVGHTMGA-------SLVSGGGFWAVPARQDFGQVWSFAGAPPEMLFAQQQ-QPATL 179
           GG+ VG T+G+       +    GGFWA+PAR DF   W FA APPEM+      Q ++L
Sbjct: 166 GGVPVGPTIGSLMGPTATAAAGSGGFWALPARADF---WGFAAAPPEMVVQPTAVQQSSL 222

Query: 180 FVRHQQQQQQQASAAAMGEASAARVGNYLPGHHLNLLASLSGGNTGSGRRE 332
           F+     QQ  A+AAAMGEASAAR+GNYLPG HLNLLASLSGG+  SGRRE
Sbjct: 223 FM----HQQHAAAAAAMGEASAARLGNYLPG-HLNLLASLSGGSGSSGRRE 268

>gi|255575966|ref|XP_002528879.1| transcription factor, putative [Ricinus
        communis]

          Length = 229

 Score =  102 bits (252), Expect = 4e-020
 Identities = 63/109 (57%), Positives = 71/109 (65%), Gaps = 18/109 (16%)
 Frame = +3

Query:  27 GLTVGHTMGASLVSG-------GGFWAVPARQDFGQVWSFAGAPPEMLFAQQQQPATLFV 185
           G++VG T     + G        GFWA+PAR DF   W FA APP++   QQQ   +LFV
Sbjct: 128 GVSVGPTAAVGSLVGHPPPQPHQGFWALPARPDF---WGFATAPPDLAAVQQQ--TSLFV 182

Query: 186 RHQQQQQQQASAAAMGEASAARVGNYLPGHHLNLLASLSGGNTGSGRRE 332
           +  QQQQ     AAMGEASAARVGNYLPG HLNLLASLSGG   SGRRE
Sbjct: 183 QQHQQQQ-----AAMGEASAARVGNYLPG-HLNLLASLSGGPGSSGRRE 225

>gi|224096516|ref|XP_002310642.1| predicted protein [Populus trichocarpa]

          Length = 269

 Score =  96 bits (237), Expect = 2e-018
 Identities = 59/104 (56%), Positives = 66/104 (63%), Gaps = 13/104 (12%)
 Frame = +3

Query:  27 GLTVGHTMGASLVSG-GGFWAVPARQDFGQVWSF-AGAPPEMLFAQQQQPATLFVRHQQQ 200
           G T+G  MG +  +G GGFWA+PAR DF   W F A APPEM+        +    HQ  
Sbjct: 173 GPTIGSLMGPTATAGPGGFWALPARPDF---WGFAAAAPPEMVVQPTAVQQSSLFMHQH- 228

Query: 201 QQQQASAAAMGEASAARVGNYLPGHHLNLLASLSGGNTGSGRRE 332
                 AAAMGEASAARVGNYLPG HLNLLASLS G+  SGRRE
Sbjct: 229 ------AAAMGEASAARVGNYLPG-HLNLLASLSSGHGSSGRRE 265

>gi|302399087|gb|ADL36838.1| TCP domain class transcription factor [Malus x
        domestica]

          Length = 288

 Score =  95 bits (235), Expect = 4e-018
 Identities = 58/108 (53%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
 Frame = +3

Query:  21 GGGLTVGHTM----GASLVSGGGFWAVPARQDFGQVWSFAGAPPEMLFAQQQQPATLFVR 188
           G    VGH+M    G +    GGFWA      FGQVWSFA  PP  L AQ         +
Sbjct: 182 GAVSVVGHSMASMLGPNAGGPGGFWA----PHFGQVWSFAATPPPELMAQSALSHQQQQQ 237

Query: 189 HQQQQQQQASAAAMGEASAARVGNYLPGHHLNLLASLSGGNTGSGRRE 332
           H QQ         MGEASAARVGNYLPG HLNLLASLSGG+  SGRRE
Sbjct: 238 HHQQHSLFLQQQPMGEASAARVGNYLPG-HLNLLASLSGGHGNSGRRE 284

>gi|225462562|ref|XP_002268058.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 255

 Score =  94 bits (231), Expect = 1e-017
 Identities = 62/116 (53%), Positives = 67/116 (57%), Gaps = 18/116 (15%)
 Frame = +3

Query:  12 VGGGGGLTVGHTMGASLVSGGGFWAVPARQDFGQVWSF----AGAPPEMLF---AQQQQP 170
           V GG    V     A+  + GGFWAVPAR DFGQVWSF    A APPEM+        QP
Sbjct: 145 VDGGAKDEVVAAAAAAAAAAGGFWAVPARPDFGQVWSFAAAAAAAPPEMVVQAPTMASQP 204

Query: 171 ATLFVRHQQQQQQQASAAAMGEASAARVGNYLP--GHHLNLLASLSGGNTGSGRRE 332
            T+  R  QQ         MGEASAARVGNYLP    HLNLLASLSG    SGRR+
Sbjct: 205 -TISGRFMQQ--------PMGEASAARVGNYLPIAQGHLNLLASLSGAPASSGRRD 251

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 993,394,655,336
Number of Sequences: 15229318
Number of Extensions: 993394655336
Number of Successful Extensions: 279802528
Number of sequences better than 0.0: 0