BLASTX 7.6.2
Query= UN78293 /QuerySize=775
(774 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G60380.1 | Symbols: | FUNCTIONS IN: molecular... 155 4e-038
TAIR9_protein||AT4G16790.1 | Symbols: | hydroxyproline-rich gly... 54 7e-008
>TAIR9_protein||AT3G60380.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT4G16790.1); Has 5716 Blast hits to 3635 proteins in 329
species: Archae - 2; Bacteria - 249; Metazoa - 2628; Fungi - 569;
Plants - 209; Viruses - 24; Other Eukaryotes - 2035 (source: NCBI
BLink). | chr3:22316913-22319144 REVERSE
Length = 744
Score = 155 bits (390), Expect = 4e-038
Identities = 103/199 (51%), Positives = 124/199 (62%), Gaps = 24/199 (12%)
Frame = -3
Query: 682 LVVKDSKRNSADDDDDDSEDYDLPGEENKEVIPN-SPQSWRA-----YRGKSVRTIRSDR 521
+V + + ++ D D +D +E K P P+SWRA RGKSVRTIRSDR
Sbjct: 551 VVTRKLEDDTVDSDKSRKKDLPGKDKEMKLDGPRIEPRSWRASSNVSLRGKSVRTIRSDR 610
Query: 520 ------SHSDSSDDRG----ESHGRTKHRRQWQQELAIVLHQEKHSE--PEDDDDDVAEE 377
+ DSS+DR ES GRTK RR Q+EL+IVLHQEK SE + + ++VA E
Sbjct: 611 HGKDVKTDGDSSEDRAEAKVESRGRTKSRRPRQEELSIVLHQEKSSETRAKSEPEEVAME 670
Query: 376 TETEAELPQETLEEEEEEEEVAAWESQSNNVSNEHYEVDRKADEFIAKFREQIRLQKLHF 197
+ P+ T EEEEE AAWESQS N S++H EVDRKA EFIAKFREQIRLQKL
Sbjct: 671 EPQAEQQPEVTFEEEEE----AAWESQS-NASHDHNEVDRKAGEFIAKFREQIRLQKLIS 725
Query: 196 GEQQRRGGGTGVIRNRHFR 140
GEQ RGGGTG+ RN FR
Sbjct: 726 GEQP-RGGGTGIFRNSQFR 743
>TAIR9_protein||AT4G16790.1 | Symbols: | hydroxyproline-rich glycoprotein
family protein | chr4:9451747-9453168 REVERSE
Length = 474
Score = 54 bits (129), Expect = 7e-008
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = -3
Query: 478 RTKHRRQWQQELAIVLHQEKHSEPEDDDDDVAEETETEAELPQETLEEEEEEEEVAAWES 299
R ++ W + IV +E+ +E D ++ + E+E ++ E E +EV
Sbjct: 365 RNAPKKVWWSD-PIVESKEQDTEKNDQRSNLGSKAVEESENGEQRRGENEIHDEVEKKIV 423
Query: 298 QSNNVS--NEHYEVDRKADEFIAKFREQIRLQKL 203
+ VS N +VD+KADEFIAKFREQIRLQ++
Sbjct: 424 EEEGVSEINNGSDVDKKADEFIAKFREQIRLQRI 457
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|
