BLASTX 7.6.2
Query= UN78352 /QuerySize=579
(578 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30682250|ref|NP_850790.1| RING/U-box domain-containing protei... 133 1e-029
gi|16648693|gb|AAL25539.1| AT5g08140/T22D6_80 [Arabidopsis thali... 133 1e-029
gi|8346551|emb|CAB93715.1| putative protein [Arabidopsis thaliana] 133 1e-029
gi|297806851|ref|XP_002871309.1| zinc finger family protein [Ara... 112 3e-023
>gi|30682250|ref|NP_850790.1| RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 376
Score = 133 bits (334), Expect = 1e-029
Identities = 80/136 (58%), Positives = 96/136 (70%), Gaps = 16/136 (11%)
Frame = +2
Query: 98 DPSRQRVEQSQVTLPHVD--IYG-YDNDGTEPRG------VVEGNCDMVIESGMGSGSVF 250
D QRVEQSQVT PH D I+G +DN+ T+ V+EGNCDMVIE G+ SGSV
Sbjct: 3 DLLHQRVEQSQVTPPHDDSNIHGDFDNEATDESRSETCSVVIEGNCDMVIELGLESGSVI 62
Query: 251 IENIGHDSSDVDV-NNHNNDDDDDLFVERRDSVLE--DIISPGSDIRLITIESGSDDDH- 418
+EN+G SD+DV N+ + DDDD FV R D LE DI S G+DIRLIT+ESGSDDD
Sbjct: 63 VENLG--DSDIDVSNDFDEPDDDDFFVGRTDFGLEFRDIASSGNDIRLITVESGSDDDDG 120
Query: 419 -ENEREMWGIDLNDDD 463
ENERE+WGIDLN++D
Sbjct: 121 VENERELWGIDLNEED 136
>gi|16648693|gb|AAL25539.1| AT5g08140/T22D6_80 [Arabidopsis thaliana]
Length = 376
Score = 133 bits (334), Expect = 1e-029
Identities = 80/136 (58%), Positives = 96/136 (70%), Gaps = 16/136 (11%)
Frame = +2
Query: 98 DPSRQRVEQSQVTLPHVD--IYG-YDNDGTEPRG------VVEGNCDMVIESGMGSGSVF 250
D QRVEQSQVT PH D I+G +DN+ T+ V+EGNCDMVIE G+ SGSV
Sbjct: 3 DLLHQRVEQSQVTPPHDDSNIHGDFDNEATDESRSETCSVVIEGNCDMVIELGLESGSVI 62
Query: 251 IENIGHDSSDVDV-NNHNNDDDDDLFVERRDSVLE--DIISPGSDIRLITIESGSDDDH- 418
+EN+G SD+DV N+ + DDDD FV R D LE DI S G+DIRLIT+ESGSDDD
Sbjct: 63 VENLG--DSDIDVSNDFDEPDDDDFFVGRTDFGLEFRDIASSGNDIRLITVESGSDDDDG 120
Query: 419 -ENEREMWGIDLNDDD 463
ENERE+WGIDLN++D
Sbjct: 121 VENERELWGIDLNEED 136
>gi|8346551|emb|CAB93715.1| putative protein [Arabidopsis thaliana]
Length = 530
Score = 133 bits (334), Expect = 1e-029
Identities = 80/136 (58%), Positives = 96/136 (70%), Gaps = 16/136 (11%)
Frame = +2
Query: 98 DPSRQRVEQSQVTLPHVD--IYG-YDNDGTEPRG------VVEGNCDMVIESGMGSGSVF 250
D QRVEQSQVT PH D I+G +DN+ T+ V+EGNCDMVIE G+ SGSV
Sbjct: 3 DLLHQRVEQSQVTPPHDDSNIHGDFDNEATDESRSETCSVVIEGNCDMVIELGLESGSVI 62
Query: 251 IENIGHDSSDVDV-NNHNNDDDDDLFVERRDSVLE--DIISPGSDIRLITIESGSDDDH- 418
+EN+G SD+DV N+ + DDDD FV R D LE DI S G+DIRLIT+ESGSDDD
Sbjct: 63 VENLG--DSDIDVSNDFDEPDDDDFFVGRTDFGLEFRDIASSGNDIRLITVESGSDDDDG 120
Query: 419 -ENEREMWGIDLNDDD 463
ENERE+WGIDLN++D
Sbjct: 121 VENERELWGIDLNEED 136
>gi|297806851|ref|XP_002871309.1| zinc finger family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 384
Score = 112 bits (280), Expect = 3e-023
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 9/98 (9%)
Frame = +2
Query: 191 VVEGNCDMVIESGMGSGSVFIENIGHDSSDVDV-NNHNNDDDDDLFVERRDSVLE--DII 361
V+EGNCDMVIE G+ SGSV +EN+G SD+DV N+ + DDDD FV R D LE DI
Sbjct: 43 VIEGNCDMVIELGLDSGSVVVENLG--DSDIDVSNDFDEPDDDDFFVGRSDFGLEFRDIA 100
Query: 362 SPGSDIRLITIESGSDDDH----ENEREMWGIDLNDDD 463
S G+DIRLIT+ESGSDDD ENE+E+WGIDLN++D
Sbjct: 101 SMGTDIRLITVESGSDDDDDDGIENEKELWGIDLNEED 138
Score = 67 bits (162), Expect = 1e-009
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 9/65 (13%)
Frame = +2
Query: 368 GSDIRLITIESGSDDDHENEREMWGIDLNDDDDVGVTIPLCWDSLQVED---SLEDFDWE 538
G D+ + DD++E++ D +DDDDV VTIPLCWDSLQ+ED + ++FDWE
Sbjct: 131 GIDLNEEDVYVNDDDEYEDD------DDDDDDDVSVTIPLCWDSLQLEDRGVTADEFDWE 184
Query: 539 EVDGG 553
EVDGG
Sbjct: 185 EVDGG 189
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,007,918,904,268
Number of Sequences: 15229318
Number of Extensions: 1007918904268
Number of Successful Extensions: 288410024
Number of sequences better than 0.0: 0
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