BLASTX 7.6.2
Query= UN78355 /QuerySize=554
(553 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative | ... 192 2e-049
TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:130... 172 1e-043
TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 87 6e-018
TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 71 3e-013
TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding... 53 9e-008
TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding... 53 9e-008
TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding... 53 9e-008
>TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative |
chr1:2076687-2077616 REVERSE
Length = 275
Score = 192 bits (486), Expect = 2e-049
Identities = 115/173 (66%), Positives = 128/173 (73%), Gaps = 20/173 (11%)
Frame = +3
Query: 66 IDQENVAPMEG-------VNTSVSEKKPAAKGGKTKRAKEVKVKEKKKTV-----KKAVS 209
++ EN A +EG V + EKKPAAKG KTK KEVK +KKTV K+ VS
Sbjct: 4 VEIENAATIEGNTAADAPVTDAAVEKKPAAKGRKTKNVKEVK---EKKTVAAAPKKRTVS 60
Query: 210 THPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKVLSPSFRKLLLLNMKRLVASEKLV 389
+HPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEK K L P+FRKLLLLN+KRLVAS KLV
Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLV 120
Query: 390 KVKASFKIPSAKPSSSSPKSAAATSAPVKKKKKPTTAA---AKEKVTAASKSK 539
KVKASFK+PSA +SSPK+AA SAP KKKP T A AK KV AASK+K
Sbjct: 121 KVKASFKLPSASAKASSPKAAAEKSAPA--KKKPATVAVTKAKRKVAAASKAK 171
>TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:13045360-13046267
FORWARD
Length = 274
Score = 172 bits (435), Expect = 1e-043
Identities = 105/174 (60%), Positives = 122/174 (70%), Gaps = 13/174 (7%)
Frame = +3
Query: 63 AIDQENV---APMEGVNTSVS--EKKPAAKGGKTKRAKEVK-----VKEKKKTVKKAVST 212
+I++ENV +T+V EKKPAAKGGK+K+ K VK T KK S+
Sbjct: 2 SIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSS 61
Query: 213 HPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKVLSPSFRKLLLLNMKRLVASEKLVK 392
HPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHK L P+FRKLLL+N+KRLVASEKLVK
Sbjct: 62 HPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVK 121
Query: 393 VKASFKIPSAKPSSSSPKSAAAT--SAPVKKKKKPTTAAAKEKVTAASKSKGAK 548
VKASFKIPSA+ S+++PK AA A V K K AAA A + +KG K
Sbjct: 122 VKASFKIPSAR-SAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTK 174
>TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846095-7846670 FORWARD
Length = 168
Score = 87 bits (214), Expect = 6e-018
Identities = 56/128 (43%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Frame = +3
Query: 168 KVKEKKKTVKKAVSTHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKVLSP-SFRKL 344
K KK K +THP Y +MIK+A++ LKE+ GSS YAI K IEEKHK L P SFRK
Sbjct: 9 KTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKT 68
Query: 345 LLLNMKRLVASEKLVKVKASFKIPSAKPSSSSPKSAAATSAPVKKKKKPTTAAAKEKVTA 524
L L +K VA KLVK++AS+K+ S + T KK KK KE +T
Sbjct: 69 LSLQLKNSVAKGKLVKIRASYKL--------SDTTKMITRQQDKKNKKNMKQEDKE-ITK 119
Query: 525 ASKSKGAK 548
++S +
Sbjct: 120 RTRSSSTR 127
>TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846254-7846670 FORWARD
Length = 139
Score = 71 bits (173), Expect = 3e-013
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Frame = +3
Query: 231 MIKDAIVTLKERTGSSQYAIQKFIEEKHKVLSP-SFRKLLLLNMKRLVASEKLVKVKASF 407
MIK+A++ LKE+ GSS YAI K IEEKHK L P SFRK L L +K VA KLVK++AS+
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60
Query: 408 KIP------SAKPSSSSPKSAAATSAPVKKKKKPTTAAAKEKVT 521
K+ + + + K+ + K+ + ++ K+ V+
Sbjct: 61 KLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVS 104
>TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 53 bits (126), Expect = 9e-008
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 225 EEMIKDAIVTLKERTGSSQYAIQKFIEEKHKVLSPSFRKLLLLNMKRLVASEKLVKVKAS 404
+ +I +AI TLKE G ++ I +IE+++ P F++LL +K L + KLVKVK
Sbjct: 122 DSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA-PPDFKRLLSTKLKYLTSCGKLVKVKRK 180
Query: 405 FKIPSAKPSSS 437
++IP++ P SS
Sbjct: 181 YRIPNSTPLSS 191
>TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 53 bits (126), Expect = 9e-008
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 225 EEMIKDAIVTLKERTGSSQYAIQKFIEEKHKVLSPSFRKLLLLNMKRLVASEKLVKVKAS 404
+ +I +AI TLKE G ++ I +IE+++ P F++LL +K L + KLVKVK
Sbjct: 122 DSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA-PPDFKRLLSTKLKYLTSCGKLVKVKRK 180
Query: 405 FKIPSAKPSSS 437
++IP++ P SS
Sbjct: 181 YRIPNSTPLSS 191
>TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 53 bits (126), Expect = 9e-008
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 225 EEMIKDAIVTLKERTGSSQYAIQKFIEEKHKVLSPSFRKLLLLNMKRLVASEKLVKVKAS 404
+ +I +AI TLKE G ++ I +IE+++ P F++LL +K L + KLVKVK
Sbjct: 122 DSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA-PPDFKRLLSTKLKYLTSCGKLVKVKRK 180
Query: 405 FKIPSAKPSSS 437
++IP++ P SS
Sbjct: 181 YRIPNSTPLSS 191
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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