BLASTX 7.6.2
Query= UN78489 /QuerySize=788
(787 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G21790.1 | Symbols: | FUNCTIONS IN: molecular... 346 1e-095
>TAIR9_protein||AT1G21790.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); Has 127 Blast hits to 127 proteins in 26 species:
Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 0; Plants - 41; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:7654357-7655691
FORWARD
Length = 289
Score = 346 bits (886), Expect = 1e-095
Identities = 171/201 (85%), Positives = 180/201 (89%), Gaps = 1/201 (0%)
Frame = +1
Query: 184 LHSIITSASVVFILLNQCLEKGVDEMFDHSELVGGAWNWAHPALCFSCGYFAYDQWDMLR 363
LHSIITSASVVFILLNQCL KG+DEMFDHSELVGG W WA+PALCFSCGYFAYDQWDML+
Sbjct: 78 LHSIITSASVVFILLNQCLAKGLDEMFDHSELVGGTWKWAYPALCFSCGYFAYDQWDMLQ 137
Query: 364 YRSYSGLIPSILVHHLFLLVCFTLALYRNVTINYLILTLICEMHSIFLHVRKLRRMAGIR 543
YR YSGLIPSILVHHL LLVCFTLALYRNVTINYLILTLICEMHSIFLHVRKLRRMAGIR
Sbjct: 138 YRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLILTLICEMHSIFLHVRKLRRMAGIR 197
Query: 544 DSGTALVKLEWVLNWTAFVFARCIPHILITVKLIKDAHKFGRGVEWPLALFGMAGMTSSM 723
DS TALVKLEWVLNWTAFVFARCIPHILIT+KLIKDAHKFG+GVE PLAL GMAGM
Sbjct: 198 DSNTALVKLEWVLNWTAFVFARCIPHILITIKLIKDAHKFGKGVELPLALSGMAGMNILN 257
Query: 724 WVLGL-ICSCF*RERAQRKER 783
LGL + F RER+ R+ +
Sbjct: 258 VGLGLDLFHAFRRERSHRRNQ 278
Score = 55 bits (131), Expect = 4e-008
Identities = 29/37 (78%), Positives = 30/37 (81%), Gaps = 5/37 (13%)
Frame = +2
Query: 92 MARTGTG-----KNGAGQFFLATLLLWLVSVVFEIAY 187
MAR G G KNGAGQFFLATLLLWLVSVVFEIA+
Sbjct: 1 MARNGIGSSGGKKNGAGQFFLATLLLWLVSVVFEIAF 37
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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