Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN78550


BLASTX 7.6.2

Query= UN78550 /QuerySize=619
        (618 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G67195.1 | Symbols: MIR414 | MIR414 (MICRORNA ...    100   1e-021
TAIR9_protein||AT1G67195.2 | Symbols: MIR414 | MIR414 (MICRORNA ...    100   1e-021
TAIR9_protein||AT1G48400.1 | Symbols:  | F-box family protein | ...     49   2e-006
TAIR9_protein||AT2G21420.1 | Symbols:  | zinc finger protein-rel...     49   3e-006

>TAIR9_protein||AT1G67195.1 | Symbols: MIR414 | MIR414 (MICRORNA 414) |
        chr1:25137378-25137644 REVERSE

          Length = 89

 Score =  100 bits (247), Expect = 1e-021
 Identities = 56/64 (87%), Positives = 60/64 (93%), Gaps = 1/64 (1%)
 Frame = +3

Query: 429 ILVRMRFGKIVEGLKSKIKASLRMRKRSSLSSSS-SSSSSSSSSSSSSYEKIEKTDSMRF 605
           ++VRMR GKIVEGLKSKIK  LRMRKRSSLSSSS SSSSSSSSSSSSSYEKIEK++SMRF
Sbjct:   1 MVVRMRLGKIVEGLKSKIKTGLRMRKRSSLSSSSYSSSSSSSSSSSSSYEKIEKSESMRF 60

Query: 606 ELRS 617
           ELRS
Sbjct:  61 ELRS 64

>TAIR9_protein||AT1G67195.2 | Symbols: MIR414 | MIR414 (MICRORNA 414) |
        chr1:25137378-25137644 REVERSE

          Length = 89

 Score =  100 bits (247), Expect = 1e-021
 Identities = 56/64 (87%), Positives = 60/64 (93%), Gaps = 1/64 (1%)
 Frame = +3

Query: 429 ILVRMRFGKIVEGLKSKIKASLRMRKRSSLSSSS-SSSSSSSSSSSSSYEKIEKTDSMRF 605
           ++VRMR GKIVEGLKSKIK  LRMRKRSSLSSSS SSSSSSSSSSSSSYEKIEK++SMRF
Sbjct:   1 MVVRMRLGKIVEGLKSKIKTGLRMRKRSSLSSSSYSSSSSSSSSSSSSYEKIEKSESMRF 60

Query: 606 ELRS 617
           ELRS
Sbjct:  61 ELRS 64

>TAIR9_protein||AT1G48400.1 | Symbols:  | F-box family protein |
        chr1:17882136-17883855 REVERSE

          Length = 514

 Score =  49 bits (115), Expect = 2e-006
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -3

Query: 577 FSYDDDDDDDDDDDDDDDDDNED 509
           + Y DDDDDDDDDDDDDDDD++D
Sbjct: 281 YDYSDDDDDDDDDDDDDDDDDDD 303


 Score =  49 bits (115), Expect = 2e-006
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = -3

Query: 577 FSYDDDDDDDDDDDDDDDDDNED 509
           +S DDDDDDDDDDDDDDDDD++D
Sbjct: 283 YSDDDDDDDDDDDDDDDDDDDDD 305


 Score =  47 bits (111), Expect = 6e-006
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = -3

Query: 568 DDDDDDDDDDDDDDDDDNED 509
           DDDDDDDDDDDDDDDDD++D
Sbjct: 285 DDDDDDDDDDDDDDDDDDDD 304


 Score =  47 bits (111), Expect = 6e-006
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = -3

Query: 568 DDDDDDDDDDDDDDDDDNED 509
           DDDDDDDDDDDDDDDDD++D
Sbjct: 287 DDDDDDDDDDDDDDDDDDDD 306


 Score =  47 bits (111), Expect = 6e-006
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = -3

Query: 568 DDDDDDDDDDDDDDDDDNED 509
           DDDDDDDDDDDDDDDDD++D
Sbjct: 288 DDDDDDDDDDDDDDDDDDDD 307

>TAIR9_protein||AT2G21420.1 | Symbols:  | zinc finger protein-related |
        chr2:9169713-9171746 FORWARD

          Length = 469

 Score =  49 bits (114), Expect = 3e-006
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = -3

Query: 568 DDDDDDDDDDDDDDDDDNED 509
           DDDDDDDDDDDDDDDDD+ED
Sbjct: 400 DDDDDDDDDDDDDDDDDDED 419

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0