BLASTX 7.6.2
Query= UN78565 /QuerySize=687
(686 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G32600.1 | Symbols: | zinc finger (C3HC4-type... 191 3e-049
TAIR9_protein||AT1G80400.1 | Symbols: | zinc finger (C3HC4-type... 116 2e-026
TAIR9_protein||AT1G15590.1 | Symbols: | FUNCTIONS IN: molecular... 62 2e-010
TAIR9_protein||AT1G15600.1 | Symbols: | unknown protein | chr1:... 57 1e-008
TAIR9_protein||AT1G15630.1 | Symbols: | unknown protein | chr1:... 53 1e-007
TAIR9_protein||AT1G44010.1 | Symbols: | unknown protein | chr1:... 53 2e-007
TAIR9_protein||AT1G15610.1 | Symbols: | unknown protein | chr1:... 52 2e-007
>TAIR9_protein||AT4G32600.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:15724010-15725737 FORWARD
Length = 454
Score = 191 bits (485), Expect = 3e-049
Identities = 112/158 (70%), Positives = 124/158 (78%), Gaps = 19/158 (12%)
Frame = +1
Query: 235 KAQTFSSTFMERSSSSSDPQTPNDHHIIDIP-------SSSSHDRISNVLEPLQHDHDDD 393
+A TF S FMERS ++ + N+H IIDIP SSSSHDRISNVLEPLQH+
Sbjct: 15 QADTF-SRFMERSPENN--LSRNEHIIIDIPRNAAIASSSSSHDRISNVLEPLQHEE--- 68
Query: 394 VERPSSTASHPPMSVPQPAT-VSSSSSSMRSNPTRSNRRRRSPLNSGLWISIELFLTLGQ 570
ERPS+ + PM+ PQPAT +SSSSSMRSNP RS RRRRSPLNSGLWISIELFLT+GQ
Sbjct: 69 -ERPSTVS---PMAAPQPATATASSSSSMRSNP-RSVRRRRSPLNSGLWISIELFLTVGQ 123
Query: 571 IVAAIVVLCLSKREHPRAPLFAWIVGYACGCVATLPLL 684
I+AAIVVL LSK EHPRAPLF WIVGYACGCVATLPLL
Sbjct: 124 IIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLL 161
>TAIR9_protein||AT1G80400.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:30225864-30227360 FORWARD
Length = 408
Score = 116 bits (289), Expect = 2e-026
Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 11/135 (8%)
Frame = +1
Query: 301 NDHHIIDIPSSSSHDRIS----NVLEPLQHDHDDD---VERPSSTASHPPMSVPQPATVS 459
N HI+DI S+ D S + L P + H + + ++T HP P+
Sbjct: 24 NREHIVDITSNDEEDSSSRSSLDELTPQGNSHQGEETVLSSSNATQQHP----THPSPPQ 79
Query: 460 SSSSSMRSNPTRSNRRRRSPLNSGLWISIELFLTLGQIVAAIVVLCLSKREHPRAPLFAW 639
+S R + RR RSPLNSGLWIS+EL +T+ QIVAAIVV+ L+K EHP APLF W
Sbjct: 80 QRPTSSRRGDNGNGRRTRSPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTW 139
Query: 640 IVGYACGCVATLPLL 684
++GY CGC+ATLP+L
Sbjct: 140 VIGYTCGCLATLPIL 154
>TAIR9_protein||AT1G15590.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G80400.1);
Has 118 Blast hits to 117 proteins in 7 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink). | chr1:5367374-5368232 FORWARD
Length = 180
Score = 62 bits (150), Expect = 2e-010
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Frame = +1
Query: 379 DHDDDVERPSSTASHPPMSVPQPATVSSSSSSMRSNPTRSNRRRRSPLN--SGLWISIEL 552
D+DD + ++ S + S SSS+ ++ S+ S LW +EL
Sbjct: 8 DNDDHIIDITNDEDSSSRSSLDERSYPSLSSSLSTDDESSDEGASSSTRDCGSLWNIMEL 67
Query: 553 FLTLGQIVAAIVVLCLSKREHPRAPLFAWIVGYACGCVATLPLL 684
+TL QIVA+++VL L+K EH +A L W++GY CGC+ T+ LL
Sbjct: 68 VVTLVQIVASLIVLTLAKDEHQQALLLTWVIGYTCGCI-TITLL 110
>TAIR9_protein||AT1G15600.1 | Symbols: | unknown protein | chr1:5368923-5369761
FORWARD
Length = 221
Score = 57 bits (135), Expect = 1e-008
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 451 TVSSSSSSMRSNPTRSNRRRRSP-LNSGLWISIELFLTLGQIVAAIVVLCLSK-REHPRA 624
T SSSS+ P N + SIE +TL I A I+VL + EHP+
Sbjct: 16 TSDGSSSSIDGQQPHEGVELGDPYTNESICNSIEFVVTLVLIAAVIIVLIEPRDEEHPQT 75
Query: 625 PLFAWIVGYACGCVATLPLL 684
L WI+GY CGC+ATLP+L
Sbjct: 76 MLSIWIIGYTCGCIATLPIL 95
>TAIR9_protein||AT1G15630.1 | Symbols: | unknown protein | chr1:5376988-5377938
FORWARD
Length = 263
Score = 53 bits (126), Expect = 1e-007
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 463 SSSSMRSNPTRSNRRRRSPLNSGLWISIELFLTLGQIVAAIVVLCLSKRE-HP---RAPL 630
SSS+ P +++ S +N +WI +EL +TL QIVAA L L+K E HP PL
Sbjct: 54 SSSAEEQTPHEASQWSCSFINGIVWILVELAVTLSQIVAATFFLTLTKDEQHPELNHVPL 113
Query: 631 FAWIVGYACGCVATL 675
WI+ Y C +AT+
Sbjct: 114 LIWIICYTCASIATV 128
>TAIR9_protein||AT1G44010.1 | Symbols: | unknown protein |
chr1:16714656-16715504 FORWARD
Length = 228
Score = 53 bits (125), Expect = 2e-007
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +1
Query: 544 IELFLTLGQIVAAIVVLCLSKREHPRAPLFAWIVGYACGCVATL 675
IE L + QIVAA VV+ +K EHP WI+GY CGCVA L
Sbjct: 60 IEFVLNIVQIVAAFVVVTRAKDEHPGTSFLVWIIGYTCGCVAIL 103
>TAIR9_protein||AT1G15610.1 | Symbols: | unknown protein | chr1:5370793-5371679
FORWARD
Length = 244
Score = 52 bits (124), Expect = 2e-007
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +1
Query: 451 TVSSSSSSMRSNPTRSNRRRRS-PLNSG-LWISIELFLTLGQIVAAIVVLCLSKREHP-- 618
T++ SSS T + S P SG WI +EL +TL QIVAAI L L+K E
Sbjct: 33 TINGGSSSADHEQTPHEAFQWSCPFTSGSFWILVELAVTLVQIVAAIFFLILTKDERDPE 92
Query: 619 -RAPLFAWIVGYACGCVATLPLL 684
LF WI+ Y C +ATLP +
Sbjct: 93 LDVALFTWIIFYTCASIATLPFV 115
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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