BLASTX 7.6.2
Query= UN78599 /QuerySize=568
(567 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15224217|ref|NP_179464.1| putative small nuclear ribonucleopr... 170 1e-040
gi|18417572|ref|NP_567844.1| small nuclear ribonucleoprotein E [... 166 3e-039
gi|242051601|ref|XP_002454946.1| hypothetical protein SORBIDRAFT... 165 4e-039
gi|115443949|ref|NP_001045754.1| Os02g0126700 [Oryza sativa Japo... 164 6e-039
gi|225455956|ref|XP_002278114.1| PREDICTED: similar to small nuc... 163 2e-038
gi|255628153|gb|ACU14421.1| unknown [Glycine max] 162 3e-038
gi|195606896|gb|ACG25278.1| small nuclear ribonucleoprotein E [Z... 162 4e-038
gi|7269933|emb|CAB81026.1| small nuclear ribonucleoprotein homol... 161 5e-038
gi|195638708|gb|ACG38822.1| small nuclear ribonucleoprotein E [Z... 161 5e-038
gi|282848216|gb|ADB02889.1| small nuclear ribonucleoprotein poly... 161 5e-038
gi|255627911|gb|ACU14300.1| unknown [Glycine max] 161 6e-038
gi|224117550|ref|XP_002331664.1| predicted protein [Populus tric... 160 1e-037
gi|226529493|ref|NP_001148430.1| small nuclear ribonucleoprotein... 160 1e-037
gi|255563612|ref|XP_002522808.1| Small nuclear ribonucleoprotein... 159 2e-037
gi|255629853|gb|ACU15277.1| unknown [Glycine max] 159 2e-037
gi|168027770|ref|XP_001766402.1| predicted protein [Physcomitrel... 159 3e-037
gi|168008828|ref|XP_001757108.1| predicted protein [Physcomitrel... 159 3e-037
gi|195615352|gb|ACG29506.1| small nuclear ribonucleoprotein E [Z... 159 3e-037
gi|217071220|gb|ACJ83970.1| unknown [Medicago truncatula] 158 5e-037
gi|255581898|ref|XP_002531748.1| Small nuclear ribonucleoprotein... 157 1e-036
>gi|15224217|ref|NP_179464.1| putative small nuclear ribonucleoprotein
[Arabidopsis thaliana]
Length = 88
Score = 170 bits (429), Expect = 1e-040
Identities = 86/88 (97%), Positives = 87/88 (98%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
SIKKNTRK LGRILLKGDNITLMMNTGK
Sbjct: 61 SIKKNTRKPLGRILLKGDNITLMMNTGK 88
>gi|18417572|ref|NP_567844.1| small nuclear ribonucleoprotein E [Arabidopsis
thaliana]
Length = 88
Score = 166 bits (418), Expect = 3e-039
Identities = 84/88 (95%), Positives = 85/88 (96%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
SIKK TRK LGRILLKGDNITLMMN GK
Sbjct: 61 SIKKKTRKPLGRILLKGDNITLMMNAGK 88
>gi|242051601|ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950
[Sorghum bicolor]
Length = 88
Score = 165 bits (416), Expect = 4e-039
Identities = 81/88 (92%), Positives = 86/88 (97%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KKNTRK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNTGK 88
>gi|115443949|ref|NP_001045754.1| Os02g0126700 [Oryza sativa Japonica Group]
Length = 88
Score = 164 bits (415), Expect = 6e-039
Identities = 82/88 (93%), Positives = 86/88 (97%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLDEAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEI 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
+IKK+TRK LGRILLKGDNITLMMNTGK
Sbjct: 61 NIKKDTRKSLGRILLKGDNITLMMNTGK 88
>gi|225455956|ref|XP_002278114.1| PREDICTED: similar to small nuclear
ribonucleoprotein E [Vitis vinifera]
Length = 88
Score = 163 bits (410), Expect = 2e-038
Identities = 80/88 (90%), Positives = 86/88 (97%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MA+TKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MATTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KKNT+K LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKNTKKTLGRILLKGDNITLMMNTGK 88
>gi|255628153|gb|ACU14421.1| unknown [Glycine max]
Length = 88
Score = 162 bits (409), Expect = 3e-038
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQR++TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
SIKK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 SIKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|195606896|gb|ACG25278.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 162 bits (408), Expect = 4e-038
Identities = 79/88 (89%), Positives = 86/88 (97%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KKNTRK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNSGK 88
>gi|7269933|emb|CAB81026.1| small nuclear ribonucleoprotein homolog [Arabidopsis
thaliana]
Length = 86
Score = 161 bits (407), Expect = 5e-038
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMN 313
SIKK TRK LGRILLKGDNITLMMN
Sbjct: 61 SIKKKTRKPLGRILLKGDNITLMMN 85
>gi|195638708|gb|ACG38822.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 161 bits (407), Expect = 5e-038
Identities = 79/88 (89%), Positives = 86/88 (97%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KKNTRK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKNTRKTLGRILLKGDNITLMMNSGK 88
>gi|282848216|gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide
[Jatropha curcas]
Length = 88
Score = 161 bits (407), Expect = 5e-038
Identities = 80/88 (90%), Positives = 85/88 (96%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KK TRK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKKTRKSLGRILLKGDNITLMMNSGK 88
>gi|255627911|gb|ACU14300.1| unknown [Glycine max]
Length = 88
Score = 161 bits (406), Expect = 6e-038
Identities = 80/88 (90%), Positives = 85/88 (96%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQR++TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
+IKK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NIKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|224117550|ref|XP_002331664.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 160 bits (404), Expect = 1e-037
Identities = 80/88 (90%), Positives = 85/88 (96%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
+IKK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NIKKKSRKSLGRILLKGDNITLMMNTGK 88
>gi|226529493|ref|NP_001148430.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 160 bits (404), Expect = 1e-037
Identities = 78/88 (88%), Positives = 86/88 (97%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEY+NLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYINLVLEDAEEI 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KKNTRK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNSGK 88
>gi|255563612|ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative
[Ricinus communis]
Length = 88
Score = 159 bits (402), Expect = 2e-037
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQ WLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQFWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|255629853|gb|ACU15277.1| unknown [Glycine max]
Length = 88
Score = 159 bits (401), Expect = 2e-037
Identities = 78/88 (88%), Positives = 84/88 (95%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQR++TQPINLIFRFLQ KARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQGKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|168027770|ref|XP_001766402.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 87
Score = 159 bits (400), Expect = 3e-037
Identities = 79/86 (91%), Positives = 83/86 (96%)
Frame = +2
Query: 65 STKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSI 244
+TKVQRI+TQPINLIFRFLQSK+RIQIWLFEQKDLRIEGRI GFDEYMNLVLDEAEEVS+
Sbjct: 2 ATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVSL 61
Query: 245 KKNTRKQLGRILLKGDNITLMMNTGK 322
KK TRK LGRILLKGDNITLMMNTGK
Sbjct: 62 KKKTRKPLGRILLKGDNITLMMNTGK 87
>gi|168008828|ref|XP_001757108.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 87
Score = 159 bits (400), Expect = 3e-037
Identities = 78/86 (90%), Positives = 84/86 (97%)
Frame = +2
Query: 65 STKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSI 244
+TKVQRI+TQPINLIFRFLQSK+RIQIWLFEQKD+RIEGRI GFDEYMNLVL+EAEEVS+
Sbjct: 2 ATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEEAEEVSL 61
Query: 245 KKNTRKQLGRILLKGDNITLMMNTGK 322
KKNTRK LGRILLKGDNITLMMNTGK
Sbjct: 62 KKNTRKPLGRILLKGDNITLMMNTGK 87
>gi|195615352|gb|ACG29506.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 159 bits (400), Expect = 3e-037
Identities = 78/88 (88%), Positives = 85/88 (96%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KKNT K LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKNTPKTLGRILLKGDNITLMMNSGK 88
>gi|217071220|gb|ACJ83970.1| unknown [Medicago truncatula]
Length = 88
Score = 158 bits (398), Expect = 5e-037
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQR++TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNL LD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLALDDAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK 322
++KK ++K LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKSKKTLGRILLKGDNITLMMNTGK 88
>gi|255581898|ref|XP_002531748.1| Small nuclear ribonucleoprotein E, putative
[Ricinus communis]
Length = 86
Score = 157 bits (395), Expect = 1e-036
Identities = 78/86 (90%), Positives = 83/86 (96%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNT 316
++KK TRK LGRILLKGDNITLMMN+
Sbjct: 61 NVKKKTRKTLGRILLKGDNITLMMNS 86
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,093,974,624,356
Number of Sequences: 15229318
Number of Extensions: 1093974624356
Number of Successful Extensions: 299540451
Number of sequences better than 0.0: 0
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