BLASTX 7.6.2
Query= UN78599 /QuerySize=568
(567 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G18740.1 | Symbols: | small nuclear ribonucle... 170 5e-043
TAIR9_protein||AT4G30330.1 | Symbols: | small nuclear ribonucle... 166 1e-041
TAIR9_protein||AT2G18740.2 | Symbols: | small nuclear ribonucle... 137 5e-033
>TAIR9_protein||AT2G18740.1 | Symbols: | small nuclear ribonucleoprotein E,
putative / snRNP-E, putative / Sm protein E, putative |
chr2:8123334-8124710 FORWARD
Length = 89
Score = 170 bits (430), Expect = 5e-043
Identities = 86/89 (96%), Positives = 87/89 (97%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK* 325
SIKKNTRK LGRILLKGDNITLMMNTGK*
Sbjct: 61 SIKKNTRKPLGRILLKGDNITLMMNTGK* 89
>TAIR9_protein||AT4G30330.1 | Symbols: | small nuclear ribonucleoprotein E,
putative / snRNP-E, putative / Sm protein E, putative |
chr4:14836773-14837919 REVERSE
Length = 89
Score = 166 bits (419), Expect = 1e-041
Identities = 84/89 (94%), Positives = 85/89 (95%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 239 SIKKNTRKQLGRILLKGDNITLMMNTGK* 325
SIKK TRK LGRILLKGDNITLMMN GK*
Sbjct: 61 SIKKKTRKPLGRILLKGDNITLMMNAGK* 89
>TAIR9_protein||AT2G18740.2 | Symbols: | small nuclear ribonucleoprotein E,
putative / snRNP-E, putative / Sm protein E, putative |
chr2:8123334-8124581 FORWARD
Length = 79
Score = 137 bits (344), Expect = 5e-033
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = +2
Query: 59 MASTKVQRIVTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 238
MASTKVQRI+TQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 239 SIKKNTRKQLG 271
SIKKNTRK LG
Sbjct: 61 SIKKNTRKPLG 71
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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