BLASTX 7.6.2
Query= UN78700 /QuerySize=597
(596 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297850600|ref|XP_002893181.1| ATSWI3C [Arabidopsis lyrata sub... 258 3e-067
gi|15219067|ref|NP_173589.1| SWI/SNF complex subunit SWI3C [Arab... 248 5e-064
gi|326528599|dbj|BAJ93481.1| predicted protein [Hordeum vulgare ... 81 7e-014
gi|159885626|dbj|BAF93190.1| putative SWIRM domain containing pr... 77 1e-012
gi|218185378|gb|EEC67805.1| hypothetical protein OsI_35371 [Oryz... 61 1e-007
gi|115484499|ref|NP_001065911.1| Os11g0183700 [Oryza sativa Japo... 59 3e-007
gi|222615636|gb|EEE51768.1| hypothetical protein OsJ_33208 [Oryz... 59 3e-007
>gi|297850600|ref|XP_002893181.1| ATSWI3C [Arabidopsis lyrata subsp. lyrata]
Length = 798
Score = 258 bits (659), Expect = 3e-067
Identities = 138/165 (83%), Positives = 148/165 (89%), Gaps = 7/165 (4%)
Frame = +3
Query: 3 TRQRFAAERARMLSARFGSTPGGITPPANTNNNLQGMSLSTGGGGNNINTLLQQQLHQQQ 182
TRQRF+AERARML+ARFGS PGGI+P N NNNLQGMSLST GGNNIN+L+ QQ QQQ
Sbjct: 638 TRQRFSAERARMLTARFGS-PGGISPQTN-NNNLQGMSLST--GGNNINSLMHQQQQQQQ 693
Query: 183 QVSAGSSQPSMIPGFSNNPQVHAQMQFMAR-QQQQQQQAFSFGPRLPLNAIQTNAGSTAS 359
Q ++ +SQPS+IPGF NNPQVHAQMQFMAR QQQQQQQAFSFGPRLPLNAIQTNAGSTAS
Sbjct: 694 QQASATSQPSIIPGFGNNPQVHAQMQFMARQQQQQQQQAFSFGPRLPLNAIQTNAGSTAS 753
Query: 360 PNVMFGNNQVNNPA--GASINQPSFSHPMVRSSTGSGSGSGLGLN 488
PNVMFGNNQ+N PA ASINQPSFSHPMVRSSTGSGSGSGLGLN
Sbjct: 754 PNVMFGNNQLNTPAAGAASINQPSFSHPMVRSSTGSGSGSGLGLN 798
>gi|15219067|ref|NP_173589.1| SWI/SNF complex subunit SWI3C [Arabidopsis
thaliana]
Length = 807
Score = 248 bits (632), Expect = 5e-064
Identities = 140/172 (81%), Positives = 147/172 (85%), Gaps = 18/172 (10%)
Frame = +3
Query: 3 TRQRFAAERARMLSARFGSTPGGITPPANTNNNLQGMSLSTGGGGNNINTLLQQQLHQQQ 182
TRQRF+AERARMLSARFGS PGGI+P NNLQGMSLST GGNNIN+L+ QQ HQQQ
Sbjct: 644 TRQRFSAERARMLSARFGS-PGGISP---QTNNLQGMSLST--GGNNINSLMHQQ-HQQQ 696
Query: 183 QVSAGSSQPSMIPGFSNNPQVHAQMQFMAR-------QQQQQQQAFSFGPRLPLNAIQTN 341
Q SA +SQPS+IPGFSNNPQV AQM FMAR QQQQQQQAFSFGPRLPLNAIQTN
Sbjct: 697 QASA-TSQPSIIPGFSNNPQVQAQMHFMARQQQQQQQQQQQQQQAFSFGPRLPLNAIQTN 755
Query: 342 AGSTASPNVMFGNNQVNNPA---GASINQPSFSHPMVRSSTGSGSGSGLGLN 488
AGSTASPNVMFGNNQ+NNPA ASINQPSFSHPMVRSSTGSGSGSGLGLN
Sbjct: 756 AGSTASPNVMFGNNQLNNPAAAGAASINQPSFSHPMVRSSTGSGSGSGLGLN 807
>gi|326528599|dbj|BAJ93481.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 781
Score = 81 bits (199), Expect = 7e-014
Identities = 59/154 (38%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Frame = +3
Query: 6 RQRFAAERARMLSARFGSTPGGITPPANTNNNLQGMSLSTGGGGNNINTLLQQQLHQQQQ 185
RQ A+R R +SARF ST GG P GG + + + Q +
Sbjct: 644 RQNLTAQRVRFMSARFAST-GGPMP---------------GGSSSTMVSNPMNQASPRPP 687
Query: 186 VSAGSSQP-SMIPGFSNNPQVH-AQMQFMARQQQQQQQAFSFGPRLPLNAIQTNAGSTAS 359
GS P SM + NN Q H AQM F+ +QQ+QQQQ SFGPRLPL+AI + S+A+
Sbjct: 688 AMPGSMPPASMQVFYGNNMQGHPAQMAFLQQQQRQQQQMLSFGPRLPLSAIHPGSSSSAA 747
Query: 360 PNVMFGNNQVNNPAGASINQPSFSHPMVRSSTGS 461
P+VMF P+ A+ N S P S S
Sbjct: 748 PSVMFNPGM---PSSATPNHHSMLRPPSSGSNNS 778
>gi|159885626|dbj|BAF93190.1| putative SWIRM domain containing protein [Hordeum
vulgare]
Length = 177
Score = 77 bits (189), Expect = 1e-012
Identities = 52/125 (41%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Frame = +3
Query: 6 RQRFAAERARMLSARFGSTPGGITPPANTNNNLQGMSLSTGGGGNNINTLLQQQLHQQQQ 185
RQ A+R R +SARF ST GG P GG + + + Q +
Sbjct: 54 RQNLTAQRVRFMSARFAST-GGPMP---------------GGSSSTMVSNPMNQASPRPP 97
Query: 186 VSAGSSQP-SMIPGFSNNPQVH-AQMQFMARQQQQQQQAFSFGPRLPLNAIQTNAGSTAS 359
GS P SM + NN Q H AQM F+ +QQ+QQQQ SFGPRLPL+AI + S+A+
Sbjct: 98 AMPGSMPPASMQVFYGNNMQGHPAQMAFLQQQQRQQQQMLSFGPRLPLSAIHPGSSSSAA 157
Query: 360 PNVMF 374
P+VMF
Sbjct: 158 PSVMF 162
>gi|218185378|gb|EEC67805.1| hypothetical protein OsI_35371 [Oryza sativa Indica
Group]
Length = 785
Score = 61 bits (146), Expect = 1e-007
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Frame = +3
Query: 84 ANTNNNLQGMSLSTGGGGNNINTLLQQQLHQQQQVSAGSSQPSMIPGFSNNPQVHA--QM 257
A+ N+L G S ST +++ + V Q SM F+NN Q H QM
Sbjct: 667 ASPGNSLPGGSTST------MSSNPMSMSPRPMGVPGSMPQSSMPAPFANNMQGHGHPQM 720
Query: 258 QFMARQQQQQQQAFSFGPRLPLNAIQTNAGSTASPNVMFGNNQVNN 395
F+ +QQQQ+QQ SFGPRLPL+AIQT S + N+MF N+
Sbjct: 721 AFLQQQQQQRQQMLSFGPRLPLSAIQTQP-SPQTSNIMFNPGMPNS 765
>gi|115484499|ref|NP_001065911.1| Os11g0183700 [Oryza sativa Japonica Group]
Length = 784
Score = 59 bits (142), Expect = 3e-007
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Frame = +3
Query: 84 ANTNNNLQGMSLSTGGGGNNINTLLQQQLHQQQQVSAGSSQPSMIPGFSNNPQVHAQMQF 263
A+ N+L G S ST +++ + V Q SM F+NN Q H Q
Sbjct: 668 ASPGNSLPGGSTST------MSSNPMSMSPRPMGVPGSMPQSSMPAPFANNMQGHGHPQM 721
Query: 264 MARQQQQQQQAFSFGPRLPLNAIQTNAGSTASPNVMFGNNQVNNPAGASINQPSFSHPMV 443
QQQQ+QQ SFGPRLPL+AIQT S + N+MF NP + P+ H ++
Sbjct: 722 AFLQQQQRQQMLSFGPRLPLSAIQTQP-SPQTSNIMF------NPGMPNSVTPN-HHQLL 773
Query: 444 RSS 452
RSS
Sbjct: 774 RSS 776
>gi|222615636|gb|EEE51768.1| hypothetical protein OsJ_33208 [Oryza sativa
Japonica Group]
Length = 784
Score = 59 bits (142), Expect = 3e-007
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Frame = +3
Query: 84 ANTNNNLQGMSLSTGGGGNNINTLLQQQLHQQQQVSAGSSQPSMIPGFSNNPQVHAQMQF 263
A+ N+L G S ST +++ + V Q SM F+NN Q H Q
Sbjct: 668 ASPGNSLPGGSTST------MSSNPMSMSPRPMGVPGSMPQSSMPAPFANNMQGHGHPQM 721
Query: 264 MARQQQQQQQAFSFGPRLPLNAIQTNAGSTASPNVMFGNNQVNNPAGASINQPSFSHPMV 443
QQQQ+QQ SFGPRLPL+AIQT S + N+MF NP + P+ H ++
Sbjct: 722 AFLQQQQRQQMLSFGPRLPLSAIQTQP-SPQTSNIMF------NPGMPNSVTPN-HHQLL 773
Query: 444 RSS 452
RSS
Sbjct: 774 RSS 776
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,093,974,624,356
Number of Sequences: 15229318
Number of Extensions: 1093974624356
Number of Successful Extensions: 299540451
Number of sequences better than 0.0: 0
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