BLASTX 7.6.2
Query= UN78703 /QuerySize=759
(758 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17981380|gb|AAL50982.1|AF453323_1 zinc finger protein LSD2 [B... 303 2e-080
gi|17981378|gb|AAL50981.1|AF453322_1 zinc finger protein LSD1 [B... 289 5e-076
gi|301133570|gb|ADK63407.1| zinc finger protein [Brassica rapa] 281 1e-073
gi|30685085|ref|NP_849549.1| zinc finger protein LSD1 [Arabidops... 245 5e-063
gi|227204487|dbj|BAH57095.1| AT4G20380 [Arabidopsis thaliana] 245 5e-063
gi|297804100|ref|XP_002869934.1| hypothetical protein ARALYDRAFT... 229 4e-058
gi|30685083|ref|NP_849548.1| zinc finger protein LSD1 [Arabidops... 226 4e-057
gi|255641264|gb|ACU20909.1| unknown [Glycine max] 157 2e-036
gi|305387471|gb|ADM52200.1| zinc finger protein LSD1 [Pisum sati... 157 2e-036
gi|255578021|ref|XP_002529881.1| Charged multivesicular body pro... 151 2e-034
gi|217075336|gb|ACJ86028.1| unknown [Medicago truncatula] 150 2e-034
gi|225444223|ref|XP_002276731.1| PREDICTED: hypothetical protein... 148 1e-033
gi|296089240|emb|CBI39012.3| unnamed protein product [Vitis vini... 148 1e-033
gi|224115560|ref|XP_002317066.1| predicted protein [Populus tric... 138 9e-031
gi|224061463|ref|XP_002300492.1| predicted protein [Populus tric... 138 1e-030
gi|238480867|ref|NP_001154257.1| zinc finger protein LSD1 [Arabi... 101 1e-019
>gi|17981380|gb|AAL50982.1|AF453323_1 zinc finger protein LSD2 [Brassica
oleracea]
Length = 193
Score = 303 bits (775), Expect = 2e-080
Identities = 137/155 (88%), Positives = 144/155 (92%), Gaps = 5/155 (3%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQL+CHGCRNTL+YPRGATNVRCALCNTINMVPLHP PPPP HHAH GMDMAHIVC
Sbjct: 1 MQDQLMCHGCRNTLLYPRGATNVRCALCNTINMVPLHPPPPPP---HHAHAGMDMAHIVC 57
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLMYPYGAPSVR 572
GGCRTMLMYTRGA+SVRCSCCQTVNLVPATPP NQPAH++CGNCRTTLMYPYGAPSVR
Sbjct: 58 GGCRTMLMYTRGASSVRCSCCQTVNLVPATPP--TNQPAHVNCGNCRTTLMYPYGAPSVR 115
Query: 573 CAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMP 677
CAVCQFVTNVNMGNGRVPFPTN PNGT ++PG MP
Sbjct: 116 CAVCQFVTNVNMGNGRVPFPTNQPNGTASSPGPMP 150
>gi|17981378|gb|AAL50981.1|AF453322_1 zinc finger protein LSD1 [Brassica
oleracea]
Length = 193
Score = 289 bits (737), Expect = 5e-076
Identities = 131/155 (84%), Positives = 140/155 (90%), Gaps = 3/155 (1%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRNTL+YPRGATNVRCALC+ +NMVPLHPHPPPPP HHAH GMDMAHIVC
Sbjct: 1 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPHPPPPPPPHHAHAGMDMAHIVC 60
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLMYPYGAPSVR 572
GGCRTMLMYTRGA+SVRCSCCQTVNLVP PP +NQ AHI+CGNCRTTLMYPYGA SV+
Sbjct: 61 GGCRTMLMYTRGASSVRCSCCQTVNLVPGPPP--SNQVAHINCGNCRTTLMYPYGASSVK 118
Query: 573 CAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMP 677
CAVCQFVTNVNM NGRVP +N PNG TAAPG+MP
Sbjct: 119 CAVCQFVTNVNMSNGRVPLASNRPNG-TAAPGTMP 152
>gi|301133570|gb|ADK63407.1| zinc finger protein [Brassica rapa]
Length = 191
Score = 281 bits (717), Expect = 1e-073
Identities = 129/155 (83%), Positives = 139/155 (89%), Gaps = 6/155 (3%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRNTL+YPRGATNVRCALC+ +NMVPLHPHPPPP HHAH GMDMAHIVC
Sbjct: 1 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPHPPPP---HHAHAGMDMAHIVC 57
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLMYPYGAPSVR 572
GGCRTMLMYTRGA+SVRCSCCQTVNLVP PP +NQ AHI+CGNCRTTLMYPYGA SV+
Sbjct: 58 GGCRTMLMYTRGASSVRCSCCQTVNLVPGPPP--SNQVAHINCGNCRTTLMYPYGASSVK 115
Query: 573 CAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMP 677
CAVCQFVTNVNM NGRVP +N PNG TA+PG+MP
Sbjct: 116 CAVCQFVTNVNMSNGRVPLASNRPNG-TASPGTMP 149
>gi|30685085|ref|NP_849549.1| zinc finger protein LSD1 [Arabidopsis thaliana]
Length = 189
Score = 245 bits (625), Expect = 5e-063
Identities = 120/173 (69%), Positives = 130/173 (75%), Gaps = 24/173 (13%)
Frame = +3
Query: 201 KKGEMQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMA 380
K +MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMA
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMA 49
Query: 381 HIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRT 536
HI+CGGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRT
Sbjct: 50 HIICGGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRT 105
Query: 537 TLMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
TLMYPYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 106 TLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 158
>gi|227204487|dbj|BAH57095.1| AT4G20380 [Arabidopsis thaliana]
Length = 218
Score = 245 bits (625), Expect = 5e-063
Identities = 120/173 (69%), Positives = 130/173 (75%), Gaps = 24/173 (13%)
Frame = +3
Query: 201 KKGEMQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMA 380
K +MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMA
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMA 49
Query: 381 HIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRT 536
HI+CGGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRT
Sbjct: 50 HIICGGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRT 105
Query: 537 TLMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
TLMYPYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 106 TLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 158
>gi|297804100|ref|XP_002869934.1| hypothetical protein ARALYDRAFT_492829
[Arabidopsis lyrata subsp. lyrata]
Length = 184
Score = 229 bits (583), Expect = 4e-058
Identities = 114/155 (73%), Positives = 123/155 (79%), Gaps = 17/155 (10%)
Frame = +3
Query: 237 GCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVCGGCRTMLM 416
GCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+CGGCRTMLM
Sbjct: 9 GCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIICGGCRTMLM 56
Query: 417 YTRGANSVRCSCCQTVNLVPA--TPPAHA--NQPAHISCGNCRTTLMYPYGAPSVRCAVC 584
YTRGA+SVRCSCCQT NLVPA AHA NQ A I+CG+CRTTLMYPYGA SV+CAVC
Sbjct: 57 YTRGASSVRCSCCQTTNLVPAHSNQVAHAPSNQVAQINCGHCRTTLMYPYGASSVKCAVC 116
Query: 585 QFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHP 689
QFVTNVNM NGRVP PTN PNG +A PG+MP P
Sbjct: 117 QFVTNVNMSNGRVPLPTNRPNG-SACPGTMPSSTP 150
>gi|30685083|ref|NP_849548.1| zinc finger protein LSD1 [Arabidopsis thaliana]
Length = 184
Score = 226 bits (574), Expect = 4e-057
Identities = 111/161 (68%), Positives = 120/161 (74%), Gaps = 24/161 (14%)
Frame = +3
Query: 237 GCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVCGGCRTMLM 416
GCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+CGGCRTMLM
Sbjct: 9 GCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIICGGCRTMLM 56
Query: 417 YTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMYPYGAPSVR 572
YTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMYPYGA SV+
Sbjct: 57 YTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVK 112
Query: 573 CAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 113 CAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 153
>gi|255641264|gb|ACU20909.1| unknown [Glycine max]
Length = 177
Score = 157 bits (396), Expect = 2e-036
Identities = 72/104 (69%), Positives = 86/104 (82%), Gaps = 5/104 (4%)
Frame = +3
Query: 366 GMDMAHIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLM 545
GM+M+ + CGGCRT+LMYTRGA SVRCSCC TVNLV PPA +NQ AH+ CGNCRTTLM
Sbjct: 38 GMEMSQLYCGGCRTLLMYTRGATSVRCSCCHTVNLV---PPA-SNQVAHVHCGNCRTTLM 93
Query: 546 YPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMP 677
YPYGAPSV+CA+C F+TNV+ NGR+P P + PNGTT A G++P
Sbjct: 94 YPYGAPSVKCALCHFITNVSTNNGRLPIPVHRPNGTTNA-GTLP 136
>gi|305387471|gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
Length = 176
Score = 157 bits (395), Expect = 2e-036
Identities = 70/104 (67%), Positives = 81/104 (77%), Gaps = 6/104 (5%)
Frame = +3
Query: 366 GMDMAHIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLM 545
GMDM+ + CGGCRT+LMYTRGA SVRCSCC TVNL P +NQ AH+ C NCRTTLM
Sbjct: 38 GMDMSQLYCGGCRTLLMYTRGATSVRCSCCHTVNLAPV-----SNQVAHVPCANCRTTLM 92
Query: 546 YPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMP 677
YPYGAPSV+CAVC ++TN+NM NGRVP P N P GTT G++P
Sbjct: 93 YPYGAPSVKCAVCHYITNINMSNGRVPVPANRPQGTTNL-GTLP 135
>gi|255578021|ref|XP_002529881.1| Charged multivesicular body protein 2b-B,
putative [Ricinus communis]
Length = 405
Score = 151 bits (379), Expect = 2e-034
Identities = 67/97 (69%), Positives = 79/97 (81%), Gaps = 5/97 (5%)
Frame = +3
Query: 366 GMDMAHIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLM 545
GM+MA ++CGGCRT+LM+TRGA SVRCSCC TVNL P + Q AHI+C NCRTTL+
Sbjct: 270 GMEMAQLICGGCRTLLMHTRGATSVRCSCCHTVNLAPV-----SGQAAHINCRNCRTTLV 324
Query: 546 YPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTT 656
YPYGAPSV+CA+C +VTNV+MGN RV PTN PNGTT
Sbjct: 325 YPYGAPSVKCALCHYVTNVSMGNVRVALPTNRPNGTT 361
>gi|217075336|gb|ACJ86028.1| unknown [Medicago truncatula]
Length = 176
Score = 150 bits (378), Expect = 2e-034
Identities = 67/104 (64%), Positives = 81/104 (77%), Gaps = 6/104 (5%)
Frame = +3
Query: 366 GMDMAHIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLM 545
GMDM+ + CGGCRT+LMYTRGA SVRCSCC TVNL P +NQ AH+ CGN RTTLM
Sbjct: 38 GMDMSQLYCGGCRTLLMYTRGATSVRCSCCHTVNLAPV-----SNQVAHVPCGNYRTTLM 92
Query: 546 YPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMP 677
YPYGAPSV+C VC ++TN+NM NGR+P P + P+GTT + G +P
Sbjct: 93 YPYGAPSVKCVVCHYITNINMSNGRLPIPGHRPHGTTDS-GMLP 135
>gi|225444223|ref|XP_002276731.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 171
Score = 148 bits (371), Expect = 1e-033
Identities = 65/94 (69%), Positives = 77/94 (81%), Gaps = 4/94 (4%)
Frame = +3
Query: 366 GMDMAHIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLM 545
G++MA ++CGGCRT+LMYTRGA SVRCSCC TVNL PA +NQ AH++CGNCRTTLM
Sbjct: 38 GLEMAQLICGGCRTLLMYTRGATSVRCSCCHTVNLAPAP----SNQVAHVNCGNCRTTLM 93
Query: 546 YPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPN 647
YPYGAPSV+CAVC +VT+V M N RVP P + PN
Sbjct: 94 YPYGAPSVKCAVCHYVTSVGMVNVRVPIPVHRPN 127
>gi|296089240|emb|CBI39012.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 148 bits (371), Expect = 1e-033
Identities = 65/94 (69%), Positives = 77/94 (81%), Gaps = 4/94 (4%)
Frame = +3
Query: 366 GMDMAHIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLM 545
G++MA ++CGGCRT+LMYTRGA SVRCSCC TVNL PA +NQ AH++CGNCRTTLM
Sbjct: 126 GLEMAQLICGGCRTLLMYTRGATSVRCSCCHTVNLAPAP----SNQVAHVNCGNCRTTLM 181
Query: 546 YPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPN 647
YPYGAPSV+CAVC +VT+V M N RVP P + PN
Sbjct: 182 YPYGAPSVKCAVCHYVTSVGMVNVRVPIPVHRPN 215
>gi|224115560|ref|XP_002317066.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 138 bits (347), Expect = 9e-031
Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 7/104 (6%)
Frame = +3
Query: 366 GMDMAHIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLM 545
GMD+A ++C GCRT+LMY RGA +VRCSCC VN P P NQ AH++CGNC+TTLM
Sbjct: 38 GMDLAQLICRGCRTLLMYARGATTVRCSCCHIVNFAPVGP----NQVAHVNCGNCQTTLM 93
Query: 546 YPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMP 677
YP GAPSV+CAVC +VTN++ N RVP P N P+G G+MP
Sbjct: 94 YPNGAPSVKCAVCHYVTNISTANVRVPLPANRPSG---IGGTMP 134
>gi|224061463|ref|XP_002300492.1| predicted protein [Populus trichocarpa]
Length = 174
Score = 138 bits (345), Expect = 1e-030
Identities = 63/109 (57%), Positives = 76/109 (69%), Gaps = 7/109 (6%)
Frame = +3
Query: 366 GMDMAHIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLM 545
GMDMA ++C GCR++LMY GA +VRCSCC VN+ P NQ AH++CGNCRT LM
Sbjct: 38 GMDMAQLICRGCRSLLMYPHGATTVRCSCCHVVNIAPG-----YNQAAHVNCGNCRTALM 92
Query: 546 YPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGT--TAAPGSMPPLH 686
YP G+PSV+C VC +VTNV+M N R+P P N PNG TA SMP H
Sbjct: 93 YPNGSPSVKCPVCHYVTNVSMANMRIPLPANRPNGIGGTAPSTSMPLPH 141
>gi|238480867|ref|NP_001154257.1| zinc finger protein LSD1 [Arabidopsis
thaliana]
Length = 210
Score = 101 bits (251), Expect = 1e-019
Identities = 46/69 (66%), Positives = 52/69 (75%)
Frame = +3
Query: 489 AHANQPAHISCGNCRTTLMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPG 668
A ++Q A I+CG+CRTTLMYPYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P
Sbjct: 111 APSSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPS 170
Query: 669 SMPPLHPLQ 695
+ P Q
Sbjct: 171 TSTSTPPSQ 179
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,093,974,624,356
Number of Sequences: 15229318
Number of Extensions: 1093974624356
Number of Successful Extensions: 299540451
Number of sequences better than 0.0: 0
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