BLASTX 7.6.2
Query= UN78703 /QuerySize=759
(758 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein... 245 2e-065
TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein... 245 2e-065
TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein... 243 8e-065
TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein... 243 8e-065
TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein... 243 8e-065
TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein... 243 8e-065
TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein... 243 8e-065
TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LS... 151 6e-037
TAIR9_protein||AT1G32540.2 | Symbols: LOL1 | LOL1 (LSD ONE LIKE ... 150 1e-036
TAIR9_protein||AT1G32540.1 | Symbols: LOL1 | LOL1 (LSD ONE LIKE ... 150 1e-036
>TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 245 bits (625), Expect = 2e-065
Identities = 120/173 (69%), Positives = 130/173 (75%), Gaps = 24/173 (13%)
Frame = +3
Query: 201 KKGEMQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMA 380
K +MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMA
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMA 49
Query: 381 HIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRT 536
HI+CGGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRT
Sbjct: 50 HIICGGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRT 105
Query: 537 TLMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
TLMYPYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 106 TLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 158
>TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 245 bits (625), Expect = 2e-065
Identities = 120/173 (69%), Positives = 130/173 (75%), Gaps = 24/173 (13%)
Frame = +3
Query: 201 KKGEMQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMA 380
K +MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMA
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMA 49
Query: 381 HIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRT 536
HI+CGGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRT
Sbjct: 50 HIICGGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRT 105
Query: 537 TLMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
TLMYPYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 106 TLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 158
>TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 243 bits (620), Expect = 8e-065
Identities = 119/169 (70%), Positives = 128/169 (75%), Gaps = 24/169 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 153
>TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 243 bits (620), Expect = 8e-065
Identities = 119/169 (70%), Positives = 128/169 (75%), Gaps = 24/169 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 153
>TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 243 bits (620), Expect = 8e-065
Identities = 119/169 (70%), Positives = 128/169 (75%), Gaps = 24/169 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 153
>TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 243 bits (620), Expect = 8e-065
Identities = 119/169 (70%), Positives = 128/169 (75%), Gaps = 24/169 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 153
>TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 243 bits (620), Expect = 8e-065
Identities = 119/169 (70%), Positives = 128/169 (75%), Gaps = 24/169 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPLHPLQ 695
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P + P Q
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQ 153
>TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 211
Score = 151 bits (380), Expect = 6e-037
Identities = 70/88 (79%), Positives = 74/88 (84%), Gaps = 12/88 (13%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVP 476
GGCRTMLMYTRGA+SVRCSCCQT NLVP
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLVP 76
Score = 101 bits (251), Expect = 5e-022
Identities = 46/69 (66%), Positives = 52/69 (75%)
Frame = +3
Query: 489 AHANQPAHISCGNCRTTLMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPG 668
A ++Q A I+CG+CRTTLMYPYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT P
Sbjct: 111 APSSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPS 170
Query: 669 SMPPLHPLQ 695
+ P Q
Sbjct: 171 TSTSTPPSQ 179
>TAIR9_protein||AT1G32540.2 | Symbols: LOL1 | LOL1 (LSD ONE LIKE 1); DNA binding
| chr1:11768043-11769591 FORWARD
Length = 155
Score = 150 bits (377), Expect = 1e-036
Identities = 74/129 (57%), Positives = 86/129 (66%), Gaps = 19/129 (14%)
Frame = +3
Query: 216 QDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVCG 395
Q QLVC GCRN L+YP GAT+V CA+CN + VP PP G +MA +VCG
Sbjct: 32 QSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVP----PP----------GTEMAQLVCG 77
Query: 396 GCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLMYPYGAPSVRC 575
GC T+LMY RGA SV+CSCC TVNL ANQ AH++CGNC LMY YGA SV+C
Sbjct: 78 GCHTLLMYIRGATSVQCSCCHTVNLA-----LEANQVAHVNCGNCMMLLMYQYGARSVKC 132
Query: 576 AVCQFVTNV 602
AVC FVT+V
Sbjct: 133 AVCNFVTSV 141
>TAIR9_protein||AT1G32540.1 | Symbols: LOL1 | LOL1 (LSD ONE LIKE 1); DNA binding
| chr1:11768253-11769591 FORWARD
Length = 188
Score = 150 bits (377), Expect = 1e-036
Identities = 74/129 (57%), Positives = 86/129 (66%), Gaps = 19/129 (14%)
Frame = +3
Query: 216 QDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVCG 395
Q QLVC GCRN L+YP GAT+V CA+CN + VP PP G +MA +VCG
Sbjct: 65 QSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVP----PP----------GTEMAQLVCG 110
Query: 396 GCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAHISCGNCRTTLMYPYGAPSVRC 575
GC T+LMY RGA SV+CSCC TVNL ANQ AH++CGNC LMY YGA SV+C
Sbjct: 111 GCHTLLMYIRGATSVQCSCCHTVNLA-----LEANQVAHVNCGNCMMLLMYQYGARSVKC 165
Query: 576 AVCQFVTNV 602
AVC FVT+V
Sbjct: 166 AVCNFVTSV 174
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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