BLASTX 7.6.2
Query= UN78812 /QuerySize=637
(636 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297848754|ref|XP_002892258.1| predicted protein [Arabidopsis ... 129 4e-028
gi|18390466|ref|NP_563725.1| zinc finger CCCH domain-containing ... 118 6e-025
gi|7211990|gb|AAF40461.1|AC004809_19 Contains similarity to zinc... 118 6e-025
gi|255644834|gb|ACU22918.1| unknown [Glycine max] 57 1e-006
gi|18403134|ref|NP_565758.1| zinc finger CCCH domain-containing ... 56 4e-006
gi|334184645|ref|NP_001189661.1| zinc finger CCCH domain-contain... 56 4e-006
>gi|297848754|ref|XP_002892258.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 411
Score = 129 bits (323), Expect = 4e-028
Identities = 67/119 (56%), Positives = 80/119 (67%), Gaps = 7/119 (5%)
Frame = -2
Query: 593 PSQGLLPPQSWATYMGQPACNNVKSYGFCKFGPDCNFDHSMLPYPGLTI------PYVSP 432
P L+ P GQPAC N +SYGFCKFG +C FDH MLPY GLT+ PY SP
Sbjct: 294 PPPNLINPFVLPARPGQPACGNFRSYGFCKFGRNCKFDHPMLPYQGLTMASSLPTPYASP 353
Query: 431 VSSNYQRSSPSPSRSALKALSNDKPDVKKEMSETDKPDRDYKQLNNSQGKEFCEKSSSP 255
VS+ +QR SPSP+RS K+LSN KPDVKKE SET+K D+D QLNNS+ ++ E SP
Sbjct: 354 VST-HQRISPSPNRSDSKSLSNGKPDVKKESSETEKADKDSGQLNNSEVQDLSENPLSP 411
Score = 61 bits (147), Expect = 9e-008
Identities = 28/37 (75%), Positives = 32/37 (86%), Gaps = 2/37 (5%)
Frame = -2
Query: 635 RPQLPQSYVPLMVSPSQGLLPPQSWATYMGQPACNNV 525
RPQ+PQSYVP+MVSPSQGLLPPQ WA YM PA N++
Sbjct: 198 RPQVPQSYVPIMVSPSQGLLPPQGWAPYM--PASNSM 232
>gi|18390466|ref|NP_563725.1| zinc finger CCCH domain-containing protein 3
[Arabidopsis thaliana]
Length = 404
Score = 118 bits (295), Expect = 6e-025
Identities = 58/98 (59%), Positives = 70/98 (71%), Gaps = 7/98 (7%)
Frame = -2
Query: 593 PSQGLLPPQSWATYMGQPACNNVKSYGFCKFGPDCNFDHSMLPYPGLTI------PYVSP 432
P L+ P GQPAC N +SYGFCKFGP+C FDH MLPYPGLT+ P+ SP
Sbjct: 294 PPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLPTPFASP 353
Query: 431 VSSNYQRSSPSPSRSALKALSNDKPDVKKEMSETDKPD 318
V++ +QR SP+P+RS K+LSN KPDVKKE SET+KPD
Sbjct: 354 VTT-HQRISPTPNRSDSKSLSNGKPDVKKESSETEKPD 390
Score = 57 bits (135), Expect = 2e-006
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -2
Query: 635 RPQLPQSYVPLMVSPSQGLLPPQSWATYM 549
RPQ+PQSYVP++VSPSQG LPPQ WA YM
Sbjct: 198 RPQVPQSYVPILVSPSQGFLPPQGWAPYM 226
>gi|7211990|gb|AAF40461.1|AC004809_19 Contains similarity to zinc finger protein
from Arabidopsis thaliana gb|AC018363. EST gb|AA713271 comes from this
gene
Length = 396
Score = 118 bits (295), Expect = 6e-025
Identities = 58/98 (59%), Positives = 70/98 (71%), Gaps = 7/98 (7%)
Frame = -2
Query: 593 PSQGLLPPQSWATYMGQPACNNVKSYGFCKFGPDCNFDHSMLPYPGLTI------PYVSP 432
P L+ P GQPAC N +SYGFCKFGP+C FDH MLPYPGLT+ P+ SP
Sbjct: 286 PPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLPTPFASP 345
Query: 431 VSSNYQRSSPSPSRSALKALSNDKPDVKKEMSETDKPD 318
V++ +QR SP+P+RS K+LSN KPDVKKE SET+KPD
Sbjct: 346 VTT-HQRISPTPNRSDSKSLSNGKPDVKKESSETEKPD 382
Score = 57 bits (135), Expect = 2e-006
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -2
Query: 635 RPQLPQSYVPLMVSPSQGLLPPQSWATYM 549
RPQ+PQSYVP++VSPSQG LPPQ WA YM
Sbjct: 190 RPQVPQSYVPILVSPSQGFLPPQGWAPYM 218
>gi|255644834|gb|ACU22918.1| unknown [Glycine max]
Length = 264
Score = 57 bits (137), Expect = 1e-006
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Frame = -2
Query: 590 SQGLLPPQSWATYMGQPACNNVKSYGFCKFGPDCNFDHSMLPYP---GLTIPYVSPVS-- 426
SQ L+ P GQ C+ + YG CKFGP C FDH +L P GLT P ++ +
Sbjct: 150 SQSLINPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMNVLDTP 209
Query: 425 -----SNYQRSSPSPSRSALKALSNDKPDVKKEMSETDKPD 318
SN Q SPS+ + K L + D K ++ K D
Sbjct: 210 LTRGLSNVQPPETSPSKLSDKKLQHS--DAKAATEDSSKQD 248
>gi|18403134|ref|NP_565758.1| zinc finger CCCH domain-containing protein 26
[Arabidopsis thaliana]
Length = 453
Score = 56 bits (133), Expect = 4e-006
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -2
Query: 605 LMVSPSQGLLPPQSWATYMGQPACNNVKSYGFCKFGPDCNFDHSMLPYP 459
L+ SP LL P GQPAC N K+YGFCKFG +C FDHSML P
Sbjct: 291 LLQSPPT-LLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNP 338
>gi|334184645|ref|NP_001189661.1| zinc finger CCCH domain-containing protein 26
[Arabidopsis thaliana]
Length = 467
Score = 56 bits (133), Expect = 4e-006
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -2
Query: 605 LMVSPSQGLLPPQSWATYMGQPACNNVKSYGFCKFGPDCNFDHSMLPYP 459
L+ SP LL P GQPAC N K+YGFCKFG +C FDHSML P
Sbjct: 291 LLQSPPT-LLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNP 338
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,093,974,624,356
Number of Sequences: 15229318
Number of Extensions: 1093974624356
Number of Successful Extensions: 299540451
Number of sequences better than 0.0: 0
|