BLASTX 7.6.2
Query= UN78812 /QuerySize=637
(636 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G04990.2 | Symbols: | zinc finger (CCCH-type)... 119 2e-027
TAIR9_protein||AT1G04990.1 | Symbols: | zinc finger (CCCH-type)... 119 2e-027
TAIR9_protein||AT2G32930.1 | Symbols: ZFN2 | ZFN2 (ZINC FINGER N... 56 2e-008
>TAIR9_protein||AT1G04990.2 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:1419368-1421454 REVERSE
Length = 405
Score = 119 bits (297), Expect = 2e-027
Identities = 62/118 (52%), Positives = 78/118 (66%), Gaps = 14/118 (11%)
Frame = -2
Query: 593 PSQGLLPPQSWATYMGQPACNNVKSYGFCKFGPDCNFDHSMLPYPGLTI------PYVSP 432
P L+ P GQPAC N +SYGFCKFGP+C FDH MLPYPGLT+ P+ SP
Sbjct: 294 PPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLPTPFASP 353
Query: 431 VSSNYQRSSPSPSRSALKALSNDKPDVKKEMSETDKPDRDYKQLNNSQGKEFCEKSSS 258
V++ +QR SP+P+RS K+LSN KPDVKKE SET+KPD N + ++ E +SS
Sbjct: 354 VTT-HQRISPTPNRSDSKSLSNGKPDVKKESSETEKPD-------NGEVQDLSEDASS 403
Score = 57 bits (135), Expect = 1e-008
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -2
Query: 635 RPQLPQSYVPLMVSPSQGLLPPQSWATYM 549
RPQ+PQSYVP++VSPSQG LPPQ WA YM
Sbjct: 198 RPQVPQSYVPILVSPSQGFLPPQGWAPYM 226
>TAIR9_protein||AT1G04990.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:1419368-1421454 REVERSE
Length = 405
Score = 119 bits (297), Expect = 2e-027
Identities = 62/118 (52%), Positives = 78/118 (66%), Gaps = 14/118 (11%)
Frame = -2
Query: 593 PSQGLLPPQSWATYMGQPACNNVKSYGFCKFGPDCNFDHSMLPYPGLTI------PYVSP 432
P L+ P GQPAC N +SYGFCKFGP+C FDH MLPYPGLT+ P+ SP
Sbjct: 294 PPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLPTPFASP 353
Query: 431 VSSNYQRSSPSPSRSALKALSNDKPDVKKEMSETDKPDRDYKQLNNSQGKEFCEKSSS 258
V++ +QR SP+P+RS K+LSN KPDVKKE SET+KPD N + ++ E +SS
Sbjct: 354 VTT-HQRISPTPNRSDSKSLSNGKPDVKKESSETEKPD-------NGEVQDLSEDASS 403
Score = 57 bits (135), Expect = 1e-008
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -2
Query: 635 RPQLPQSYVPLMVSPSQGLLPPQSWATYM 549
RPQ+PQSYVP++VSPSQG LPPQ WA YM
Sbjct: 198 RPQVPQSYVPILVSPSQGFLPPQGWAPYM 226
>TAIR9_protein||AT2G32930.1 | Symbols: ZFN2 | ZFN2 (ZINC FINGER NUCLEASE 2); DNA
binding / nuclease/ nucleic acid binding | chr2:13965990-13968419
REVERSE
Length = 454
Score = 56 bits (133), Expect = 2e-008
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -2
Query: 605 LMVSPSQGLLPPQSWATYMGQPACNNVKSYGFCKFGPDCNFDHSMLPYP 459
L+ SP LL P GQPAC N K+YGFCKFG +C FDHSML P
Sbjct: 291 LLQSPPT-LLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNP 338
Score = 49 bits (114), Expect = 3e-006
Identities = 22/29 (75%), Positives = 25/29 (86%), Gaps = 2/29 (6%)
Frame = -2
Query: 629 QLPQS--YVPLMVSPSQGLLPPQSWATYM 549
Q+PQS Y+P MV+PSQGLLPPQ WATYM
Sbjct: 201 QVPQSQAYMPYMVAPSQGLLPPQGWATYM 229
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|