BLASTX 7.6.2
Query= UN78956 /QuerySize=551
(550 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G54190.1 | Symbols: | FUNCTIONS IN: molecular... 178 2e-045
TAIR9_protein||AT2G38630.1 | Symbols: | FUNCTIONS IN: molecular... 161 3e-040
>TAIR9_protein||AT3G54190.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: WD40 repeat-like (InterPro:IPR011046); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT2G38630.1); Has 77
Blast hits to 77 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink). | chr3:20061759-20063880 REVERSE
Length = 468
Score = 178 bits (451), Expect = 2e-045
Identities = 87/99 (87%), Positives = 90/99 (90%), Gaps = 2/99 (2%)
Frame = -3
Query: 548 ISYCKADTEDQWIEGNAGSINISNILTGKCLAKITSSSGPPKEDESSSSSSSSLGNNSKQ 369
ISYCKADTEDQWIEGNAGSINISNILTGKCLAKIT SSGPPK+DE SSSS+ +G NSKQ
Sbjct: 372 ISYCKADTEDQWIEGNAGSINISNILTGKCLAKITPSSGPPKDDE--SSSSNCMGKNSKQ 429
Query: 368 RRNAVAEVLEDITAFFYDEERNEIYTGNRHGYVHVWSN* 252
RRNAVAE LEDITA FYDEERNEIYTGNRHG VHVWSN*
Sbjct: 430 RRNAVAEALEDITALFYDEERNEIYTGNRHGLVHVWSN* 468
>TAIR9_protein||AT2G38630.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G54190.1); Has 79 Blast hits to 77 proteins in
21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
53; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). |
chr2:16154283-16156302 REVERSE
Length = 468
Score = 161 bits (406), Expect = 3e-040
Identities = 79/99 (79%), Positives = 88/99 (88%), Gaps = 4/99 (4%)
Frame = -3
Query: 548 ISYCKADTEDQWIEGNAGSINISNILTGKCLAKITSSSGPPKEDESSSSSSSSLGNNSKQ 369
ISYCKADTEDQWIEGNAGSINISNILTGKCLAKI +++GPPKE++ SSS LGN+S+
Sbjct: 374 ISYCKADTEDQWIEGNAGSINISNILTGKCLAKIKANNGPPKEED---CSSSDLGNSSR- 429
Query: 368 RRNAVAEVLEDITAFFYDEERNEIYTGNRHGYVHVWSN* 252
RR+AVAE LEDITA FYDEERNEIYTGNRHG +HVWSN*
Sbjct: 430 RRSAVAEALEDITALFYDEERNEIYTGNRHGLLHVWSN* 468
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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