BLASTX 7.6.2
Query= UN78985 /QuerySize=658
(657 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G44280.1 | Symbols: ATRING1A, RING1A | RING1A ... 183 1e-046
TAIR9_protein||AT1G03770.1 | Symbols: ATRING1B, RING1B | RING1B ... 139 2e-033
TAIR9_protein||AT5G44280.2 | Symbols: ATRING1A, RING1A | RING1A ... 116 2e-026
TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:... 71 6e-013
>TAIR9_protein||AT5G44280.1 | Symbols: ATRING1A, RING1A | RING1A (RING 1A);
protein binding / zinc ion binding | chr5:17836115-17839114 REVERSE
Length = 523
Score = 183 bits (462), Expect = 1e-046
Identities = 93/144 (64%), Positives = 113/144 (78%), Gaps = 8/144 (5%)
Frame = +3
Query: 156 RDQQQQLHRFDPEAEENEPEDLQEEETVVEKKDEEEVKRDEAEEEEE---VVEEEEEDKE 326
+D+ ++ D E + +E E +++E V EE+ D+AEE+EE EE+EE +E
Sbjct: 35 KDETKEEKEGDEEVKHDEAE--EDQEVVKPNDAEEDDDGDDAEEDEEEEVEAEEDEEAEE 92
Query: 327 DGDEDAEEEEEEEDSKEKSP---SGDKSEFVEIDLGEIRKDVQCPICLGIIKKTRTVMEC 497
+ +E+ EEEEEEEDSKE+SP SGD+SEF+EIDLGEIRKDVQCPICLGIIKKTRTVMEC
Sbjct: 93 EEEEEEEEEEEEEDSKERSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMEC 152
Query: 498 LHRFCRECIDKSMRLGNNECPACR 569
LHRFCRECIDKSMRLGNNECPACR
Sbjct: 153 LHRFCRECIDKSMRLGNNECPACR 176
Score = 63 bits (152), Expect = 1e-010
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +2
Query: 566 QKHCASRRSLRDDPKFDALIAALFTNIDSY 655
+KHCASRRSLRDDPKFDALIAALFTNIDSY
Sbjct: 176 RKHCASRRSLRDDPKFDALIAALFTNIDSY 205
>TAIR9_protein||AT1G03770.1 | Symbols: ATRING1B, RING1B | RING1B (RING 1B);
protein binding / zinc ion binding | chr1:944772-947431 FORWARD
Length = 461
Score = 139 bits (348), Expect = 2e-033
Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 15/142 (10%)
Frame = +3
Query: 159 DQQQQLHRFDPEAEENEPEDLQEEETVVEKKDEEEVKRDEAEEEEEVVEEEEEDKEDGDE 338
++ QL R + EAE PE +++EE +K DE +DE+ +EE+ V+ ++ + E
Sbjct: 12 EEDDQLGR-NSEAERFNPEAVEKEED-PDKMDE----KDESGDEEDDVKRDQVEA----E 61
Query: 339 DAEEEEEEEDSKEKSPSG-----DKSEFVEIDLGEIRKDVQCPICLGIIKKTRTVMECLH 503
D E EEEDSKE+S S +SE++ +DL +I KDVQC ICLGII+KTRTVMECLH
Sbjct: 62 DEEALGEEEDSKERSQSSSAGELSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLH 121
Query: 504 RFCRECIDKSMRLGNNECPACR 569
RFCRECIDKSMRLGNNECP CR
Sbjct: 122 RFCRECIDKSMRLGNNECPTCR 143
>TAIR9_protein||AT5G44280.2 | Symbols: ATRING1A, RING1A | RING1A (RING 1A);
protein binding / zinc ion binding | chr5:17836115-17839114 REVERSE
Length = 526
Score = 116 bits (288), Expect = 2e-026
Identities = 69/148 (46%), Positives = 96/148 (64%), Gaps = 13/148 (8%)
Frame = +3
Query: 156 RDQQQQLHRFDPEAEENEPEDLQEEETVVEKKDEEEVKRDEAEEEEE---VVEEEEEDKE 326
+D+ ++ D E + +E E +++E V EE+ D+AEE+EE EE+EE +E
Sbjct: 35 KDETKEEKEGDEEVKHDEAE--EDQEVVKPNDAEEDDDGDDAEEDEEEEVEAEEDEEAEE 92
Query: 327 DGDEDAEEEEEEEDSKEKSP---SGDKSEFVEIDLGEIRKDVQCPICLGIIKKTRTVMEC 497
+ +E+ EEEEEEEDSKE+SP SGD+SEF+EIDLGEIRKDVQCPICL +K R +
Sbjct: 93 EEEEEEEEEEEEEDSKERSPSSISGDQSEFMEIDLGEIRKDVQCPICLVGMKFLRLFIS- 151
Query: 498 LHRFCRECIDKSMR----LGNNECPACR 569
++ ++C S + NNECPACR
Sbjct: 152 YYKENKDCDGMSPQFCATFKNNECPACR 179
Score = 77 bits (187), Expect = 1e-014
Identities = 39/63 (61%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Frame = +2
Query: 467 YKENKDCDGMPAPLLPGMY*QVNEIREQRMSCLQKHCASRRSLRDDPKFDALIAALFTNI 646
YKENKDCDGM + +KHCASRRSLRDDPKFDALIAALFTNI
Sbjct: 153 YKENKDCDGMSPQFCA-------TFKNNECPACRKHCASRRSLRDDPKFDALIAALFTNI 205
Query: 647 DSY 655
DSY
Sbjct: 206 DSY 208
>TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:971107-971627
FORWARD
Length = 82
Score = 71 bits (172), Expect = 6e-013
Identities = 33/65 (50%), Positives = 49/65 (75%)
Frame = +3
Query: 186 DPEAEENEPEDLQEEETVVEKKDEEEVKRDEAEEEEEVVEEEEEDKEDGDEDAEEEEEEE 365
+ E EE E E+ +EEE E+++EEE + +E EEEEE EEEEE++E+ +E+ EEEEEEE
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Query: 366 DSKEK 380
+ +E+
Sbjct: 66 EDRER 70
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
|