BLASTX 7.6.2
Query= UN79310 /QuerySize=698
(697 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G01970.1 | Symbols: | pentatricopeptide (PPR)... 229 2e-060
TAIR9_protein||AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSIO... 95 3e-020
>TAIR9_protein||AT1G01970.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:338538-339905 FORWARD
Length = 410
Score = 229 bits (582), Expect = 2e-060
Identities = 127/219 (57%), Positives = 158/219 (72%), Gaps = 17/219 (7%)
Frame = +3
Query: 57 MGFYSSNAVLNSAFS--PCVSSGSLYFSTRRRTPFFFVQESPLRFCR-KCTTTMV---VV 218
MG YS +AVL+ ++ LY RR P V+ R C KC ++ VV
Sbjct: 1 MGIYSCSAVLSFGLKCPLVIARHRLYHRMFRRNP-LLVESHLNRLCSCKCNASLAIGEVV 59
Query: 219 DKEE----KGPNWVDLNHHHHQITEEQEEAISRIPVNMSKRCQALMKQIIICLEEKEDSF 386
+KE+ + NW D+ + +TEEQ+EAI+RIP+ MSKRCQALM+Q IIC ++ SF
Sbjct: 60 EKEDAEQSRSFNWADVGLN---LTEEQDEAITRIPIKMSKRCQALMRQ-IICFSPEKGSF 115
Query: 387 CCDDMLAAWVRRMKPIRADWLSLLKHLNTLDSPFYIKVAEYALLEDSFEANPRDYTKIIH 566
C D+L AW+RRM PIRADWLS+LK L LDSPFYIKVAE++LL+DSFEAN RDYTKIIH
Sbjct: 116 C--DLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIH 173
Query: 567 YYGKLNQIQDAEKTLVAMKNRGFLIDQVTLTAMLQSYSK 683
YYGKLNQ++DAE+TL++MKNRGFLIDQVTLTAM+Q YSK
Sbjct: 174 YYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSK 212
>TAIR9_protein||AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5)
| chr1:6760032-6762581 FORWARD
Length = 726
Score = 95 bits (235), Expect = 3e-020
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Frame = +3
Query: 225 EEKGPNWVDLNHHHHQITEEQEEAISRIPVNMSKRCQALMKQIIICLEEKEDSFCCDDML 404
E P WV++ H E +EEA R P ++ +C+ +M++ + L+E +D +L
Sbjct: 286 ELSDPKWVEMADKIH---EAEEEADWREPKPVTGKCKLVMEK-LESLQEGDDP---SGLL 338
Query: 405 AAWVRRMKPIRADWLSLLKHLNTLDSPFYIKVAEYALLEDSFEANPRDYTKIIHYYGKLN 584
A W ++P R DW++L+ L ++ Y+KVAE L E SF A+ DY+K+IH + K N
Sbjct: 339 AEWAELLEPNRVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKEN 398
Query: 585 QIQDAEKTLVAMKNRGFLIDQVTLTAMLQSYSK 683
I+D E+ L M G D +T TA++ YSK
Sbjct: 399 HIEDVERILKKMSQNGIFPDILTATALVHMYSK 431
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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