Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN79445


BLASTX 7.6.2

Query= UN79445 /QuerySize=689
        (688 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|18420555|ref|NP_568073.1| uncharacterized protein [Arabidopsi...    192   4e-047
gi|4490741|emb|CAB38903.1| hypothetical protein [Arabidopsis tha...    192   4e-047
gi|297802102|ref|XP_002868935.1| hypothetical protein ARALYDRAFT...    187   2e-045

>gi|18420555|ref|NP_568073.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 245

 Score =  192 bits (487), Expect = 4e-047
 Identities = 113/167 (67%), Positives = 123/167 (73%), Gaps = 27/167 (16%)
 Frame = +3

Query: 243 KQQF---ADSNSPLNYPSFKPPPKP-----SHCAIDVSPLLVKE-----EEEEEAAFPFQ 383
           KQQF   AD N+PL YPSFK P         H AIDV PLLVKE     +E+ +      
Sbjct:   9 KQQFASVADGNAPLKYPSFKLPKSTFGDTGKHSAIDVFPLLVKEAAFPLKEDRDI----- 63

Query: 384 QDTSLVQDVCTISVLPDEGNTL---LPHFTLLSFVKALLPSKNQMFIDAQLNCQKTQNRI 554
            DTSLVQDVCTISVLPDEGNT+     HFTLLSFVKALLPSKNQM IDAQLNCQKTQNRI
Sbjct:  64 -DTSLVQDVCTISVLPDEGNTIPQCTSHFTLLSFVKALLPSKNQMLIDAQLNCQKTQNRI 122

Query: 555 NVLLGGTDSYQSCVVDINVEKSNGGE---AHDGGGVLGNLKSETVHM 686
           NVLLGGTDSYQSCVVDINVEK NGGE   +HD   V+ ++KSE+VHM
Sbjct: 123 NVLLGGTDSYQSCVVDINVEKGNGGETVTSHD--EVVASMKSESVHM 167

>gi|4490741|emb|CAB38903.1| hypothetical protein [Arabidopsis thaliana]

          Length = 375

 Score =  192 bits (487), Expect = 4e-047
 Identities = 113/167 (67%), Positives = 123/167 (73%), Gaps = 27/167 (16%)
 Frame = +3

Query: 243 KQQF---ADSNSPLNYPSFKPPPKP-----SHCAIDVSPLLVKE-----EEEEEAAFPFQ 383
           KQQF   AD N+PL YPSFK P         H AIDV PLLVKE     +E+ +      
Sbjct:   9 KQQFASVADGNAPLKYPSFKLPKSTFGDTGKHSAIDVFPLLVKEAAFPLKEDRDI----- 63

Query: 384 QDTSLVQDVCTISVLPDEGNTL---LPHFTLLSFVKALLPSKNQMFIDAQLNCQKTQNRI 554
            DTSLVQDVCTISVLPDEGNT+     HFTLLSFVKALLPSKNQM IDAQLNCQKTQNRI
Sbjct:  64 -DTSLVQDVCTISVLPDEGNTIPQCTSHFTLLSFVKALLPSKNQMLIDAQLNCQKTQNRI 122

Query: 555 NVLLGGTDSYQSCVVDINVEKSNGGE---AHDGGGVLGNLKSETVHM 686
           NVLLGGTDSYQSCVVDINVEK NGGE   +HD   V+ ++KSE+VHM
Sbjct: 123 NVLLGGTDSYQSCVVDINVEKGNGGETVTSHD--EVVASMKSESVHM 167

>gi|297802102|ref|XP_002868935.1| hypothetical protein ARALYDRAFT_912479
        [Arabidopsis lyrata subsp. lyrata]

          Length = 244

 Score =  187 bits (473), Expect = 2e-045
 Identities = 110/166 (66%), Positives = 120/166 (72%), Gaps = 25/166 (15%)
 Frame = +3

Query: 243 KQQF---ADSNSPLNYPSFKPPPKP-----SHCAIDVSPLLVKEEE----EEEAAFPFQQ 386
           KQQF   AD N+P+ YPSFKPP         H AIDV PLLVKE      E+        
Sbjct:   9 KQQFASVADGNAPVKYPSFKPPKSSFGDGGKHSAIDVFPLLVKEAAYPLIEDRGI----- 63

Query: 387 DTSLVQDVCTISVLPDEGNTL---LPHFTLLSFVKALLPSKNQMFIDAQLNCQKTQNRIN 557
           DTSLVQD+CTISVLPDEGNT+      FTLLSFVKALLPSKNQM  DAQLNCQKTQNRIN
Sbjct:  64 DTSLVQDMCTISVLPDEGNTIPQCTSQFTLLSFVKALLPSKNQMLFDAQLNCQKTQNRIN 123

Query: 558 VLLGGTDSYQSCVVDINVEKSNGGE---AHDGGGVLGNLKSETVHM 686
           VLLGGTDSYQSCVVDINVEK NGG+   +HD   V+G+ KSE+VHM
Sbjct: 124 VLLGGTDSYQSCVVDINVEKGNGGDTVTSHD--EVVGSGKSESVHM 167

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,093,974,624,356
Number of Sequences: 15229318
Number of Extensions: 1093974624356
Number of Successful Extensions: 299540451
Number of sequences better than 0.0: 0