Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN79493


BLASTX 7.6.2

Query= UN79493 /QuerySize=727
        (726 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|237839061|ref|XP_002368828.1| RNA recognition motif-containin...     66   4e-009
gi|326427171|gb|EGD72741.1| hypothetical protein PTSG_04470 [Sal...     58   1e-006
gi|47211224|emb|CAF92780.1| unnamed protein product [Tetraodon n...     58   1e-006
gi|221502126|gb|EEE27870.1| glycine-rich RNA-binding protein, pu...     57   2e-006
gi|328874773|gb|EGG23138.1| putative THO2 protein [Dictyostelium...     55   9e-006

>gi|237839061|ref|XP_002368828.1| RNA recognition motif-containing protein
        [Toxoplasma gondii ME49]

          Length = 754

 Score =  66 bits (160), Expect = 4e-009
 Identities = 47/120 (39%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
 Frame = -2

Query: 380 RARDGYGEERT*DEMSWEMGRSRERARSSSEIERESARSSPEIERERGRDVGD*ERERAL 201
           R R+    ER  +E   E  R RER R   E +R+  R   + +RER R+  + ERER  
Sbjct: 569 REREERDREREREERDREREREREREREREERDRQREREERDRQREREREREEREREREE 628

Query: 200 RDGSRERERALRDEMDRERARRFAGDRERELEMSQFAGDRERELGVRRRSKGVRQRSLRR 21
           RD  RERE     E DRER  R  G+   E E  +  G+R+RE G RRR +       RR
Sbjct: 629 RDRQRERE-----ERDREREERDEGESGSEGEKERGRGERKRE-GERRRRRADEDAKERR 682


 Score =  61 bits (146), Expect = 2e-007
 Identities = 51/127 (40%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
 Frame = -2

Query: 398 GSDGFGRARDGYG-----EERT*DEMSWEMGRSRERARSSSEIERESARSSPEIERERGR 234
           G   F  +  G G     +ER   E   E  R RER    SE ER+  R   E +RER R
Sbjct: 524 GRSNFSSSASGLGGGEVNQERGERERETENERDRER---DSENERDREREREERDRERER 580

Query: 233 DVGD*ERERALRDGSRERERALRDEMDRERARRFAGDRERELEMSQFAGDRERELGVRRR 54
           +  D ERER      RERER  R+E DR+R R    DR+RE E  +   +RERE   R+R
Sbjct: 581 EERDRERER-----ERERERE-REERDRQRERE-ERDRQREREREREEREREREERDRQR 633

Query:  53 SKGVRQR 33
            +  R R
Sbjct: 634 EREERDR 640

>gi|326427171|gb|EGD72741.1| hypothetical protein PTSG_04470 [Salpingoeca sp.
        ATCC 50818]

          Length = 859

 Score =  58 bits (139), Expect = 1e-006
 Identities = 39/96 (40%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
 Frame = -1

Query: 315 ERESSEFVGDRERERSEFTGDRERERSRCRRLRERESSARWIQRERESSTRRDGSRESSE 136
           ERE  E    RERER E    RERER   R  RERE   +  QRERE        RE  E
Sbjct: 599 ERERQEKKEQRERERQEKKEQRERERQEKREQRERERQEKKEQRERERQRELQEKREQRE 658

Query: 135 IRR------RSRERA*DVAVRRRSRERTRSSSEIER 46
             R      R RER  ++  +R  RER R   + +R
Sbjct: 659 RERQEKKEQRERERQRELQEKREQRERKRQEKKEQR 694

>gi|47211224|emb|CAF92780.1| unnamed protein product [Tetraodon nigroviridis]

          Length = 555

 Score =  58 bits (138), Expect = 1e-006
 Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
 Frame = -1

Query: 318 VERESSEFVGDRERERSEFTGDRERERSRCRRLRERESSARWIQRERESSTRRDGSRESS 139
           +ERE  E   +RERER     ++E+ER R R         R  +RERE +  R+  RE  
Sbjct:  17 LERERRERDKERERERERRDREKEKERERERDKERERDREREREREREKTKERERERERE 76

Query: 138 EIRRRSRERA*DVAV-RRRSRERTRSSSEIERCSSE 34
             R R RER+ D+   R RS+ER R   + +R   E
Sbjct:  77 RERERERERSRDIREDRSRSKERAREDKKRDRDEDE 112

>gi|221502126|gb|EEE27870.1| glycine-rich RNA-binding protein, putative
        [Toxoplasma gondii VEG]

          Length = 763

 Score =  57 bits (137), Expect = 2e-006
 Identities = 41/95 (43%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
 Frame = -1

Query: 315 ERESSEFVGDRERERSEFTGDRERERSRCRRLRERESSARWIQRERESSTR-RDGSRESS 139
           ERE  +   +RERER E   +RERER R  R RERE   R  QRERE   R R+  RE  
Sbjct: 570 EREERDREREREREREERDREREREREREERDREREREERDRQREREERDRQRERERERE 629

Query: 138 EIRRRSRERA*DVAVRRRSRERTRSSSEIERCSSE 34
           E  R   ER  D    R  R+R R   +     SE
Sbjct: 630 EREREREER--DRQREREERDREREERDEGESGSE 662


 Score =  56 bits (133), Expect = 5e-006
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
 Frame = -2

Query: 329 EMGRSRERARSSSEIERESARSSPEIERERGRDVGD*ERERALRDGSRERERALRD---E 159
           E  R RER     E ERE  R   + ERER R+  + +RER   +  R+RER  RD   E
Sbjct: 564 ERDREREREERDREREREREREERDREREREREREERDREREREERDRQREREERDRQRE 623

Query: 158 MDRERARRFAGDRERELEMSQFAGDRERE 72
            +RER  R     ER+ +  +   DRERE
Sbjct: 624 REREREEREREREERDRQREREERDRERE 652

>gi|328874773|gb|EGG23138.1| putative THO2 protein [Dictyostelium fasciculatum]

          Length = 1181

 Score =  55 bits (131), Expect = 9e-006
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
 Frame = -2

Query: 380 RARDGYGEERT*DEMSWEMGRSRERARSSSEIERESARSSPEIERERGRDVGD*ERERAL 201
           R R+    ER   E   +    RE+ R   E +RE      E E+ER R   + ERER  
Sbjct: 727 REREKEIRERELREKEMKEKEIREQQRERQERDRERVEKEKEREKERERQEREKERERQE 786

Query: 200 RDGSRERER--ALRDEMDRERARRFAGDRERELEMSQFAGDRERELGVRR 57
           RD  RE+ER   L  E DRER ++ + +R+RE  +++   +RE++  V R
Sbjct: 787 RDREREKEREQQLSRERDREREQQLSRERDRE-RITEKEREREKDREVER 835

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,093,974,624,356
Number of Sequences: 15229318
Number of Extensions: 1093974624356
Number of Successful Extensions: 299540451
Number of sequences better than 0.0: 0