BLASTX 7.6.2
Query= UN79493 /QuerySize=727
(726 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=... 53 2e-006
sp|B2RY56|RBM25_MOUSE RNA-binding protein 25 OS=Mus musculus GN=... 51 6e-006
sp|P09406|RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa O... 51 6e-006
>sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1
SV=3
Length = 843
Score = 53 bits (125), Expect = 2e-006
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = -1
Query: 318 VERESSEFVGDRERERSEFTGDRERERSRCRRLRERESSARWIQRERESSTRRDGSRESS 139
+E+E E +RERER +RERER R R + R R+R+ + RD R+
Sbjct: 305 IEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRE 364
Query: 138 EIRRRSRERA*DVAVRRRSRERTRSSS 58
R R RER+ D R + R R+R S
Sbjct: 365 RDRDRDRERSSD---RNKDRSRSREKS 388
Score = 51 bits (120), Expect = 8e-006
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = -2
Query: 359 EERT*DEMSWEMGRSRERARSSSEIERESARSSPEIERERGRDVGD*ERERALRDGSRER 180
EE D +S E+ + R+ + E + + + EIE+ER + ERER R+ RER
Sbjct: 270 EEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERER 329
Query: 179 ERALRDEMDRERARRFAGDRERELEMSQFAGDRERELGVRRRSKGVRQRSLRRVASME 6
ER E ++ER R DR+R+ + DR+RE R + R+ R S E
Sbjct: 330 EREREREKEKERERERERDRDRD-RTKERDRDRDRERDRDRDRERSSDRNKDRSRSRE 386
>sp|B2RY56|RBM25_MOUSE RNA-binding protein 25 OS=Mus musculus GN=Rbm25 PE=1
SV=1
Length = 841
Score = 51 bits (121), Expect = 6e-006
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Frame = -2
Query: 359 EERT*DEMSWEMGRSRERARSSSEIERESARSSPEIERERGRDVGD*ERERALRDGSRER 180
EE D +S E+ + R+ + E + + + EIE+ER + ERER R+ RER
Sbjct: 272 EEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERER 331
Query: 179 ERALRDEMDRERARRFAGDRERELEMSQFAGDRERELGVRRRSKGVRQRSLRRVASME 6
ER E ++ER R DR+R+ + DR+RE R + R+ R S E
Sbjct: 332 EREREREKEKERERERERDRDRDRTKER---DRDRERDRDRDRERSSDRNKDRSRSRE 386
>sp|P09406|RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus
laevis GN=snrnp70 PE=2 SV=1
Length = 471
Score = 51 bits (121), Expect = 6e-006
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = -1
Query: 315 ERESSEFVGDRERERSEFTGDRERERSRCRRLRERESSARWIQRERESSTRRDGSRESSE 136
ER+ E +RE+E E R RER R R RE+E R ++ ++ +D + +
Sbjct: 230 ERDRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREKSKDKDKEKDKDNKDRD 289
Query: 135 IRRRSRERA*DVAVRRRSRERTRSSSEIERCSSEI 31
+RRSR R R+R R+R R E ER +E+
Sbjct: 290 RKRRSRSRE-----RKRERDRDREKKE-ERVEAEV 318
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,370,568,157
Number of Sequences: 518415
Number of Extensions: 256370568157
Number of Successful Extensions: 1656380741
Number of sequences better than 0.0: 0
|