Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN79539


BLASTX 7.6.2

Query= UN79539 /QuerySize=628
        (627 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G54600.1 | Symbols:  | 50S ribosomal protein L...    265   2e-071
TAIR9_protein||AT5G54600.2 | Symbols:  | 50S ribosomal protein L...    184   3e-047

>TAIR9_protein||AT5G54600.1 | Symbols:  | 50S ribosomal protein L24, chloroplast
        (CL24) | chr5:22183046-22184403 FORWARD

          Length = 199

 Score =  265 bits (676), Expect = 2e-071
 Identities = 132/145 (91%), Positives = 139/145 (95%)
 Frame = +3

Query:  78 MATMSALQSSFTSLSITSNSSFLGQRLLSPIPLSVASPVKLVKNPCLVFAKLKRWERKKC 257
           MATMSALQSSFTSLS++ +SSFLGQRL+SPI LSV SPVK  +NPCLV AKLKRWERK+C
Sbjct:   1 MATMSALQSSFTSLSLSPSSSFLGQRLISPISLSVTSPVKPAENPCLVLAKLKRWERKEC 60

Query: 258 KPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREE 437
           KPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREE
Sbjct:  61 KPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREE 120

Query: 438 GEPGQIVKIEAPIHSSNVMLYSKER 512
           GEPGQIVKIEAPIHSSNVMLYSKE+
Sbjct: 121 GEPGQIVKIEAPIHSSNVMLYSKEK 145


 Score =  77 bits (189), Expect = 6e-015
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +2

Query: 503 ERKEVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKQLKE 625
           + K+VVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWK LKE
Sbjct: 143 KEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKLLKE 183

>TAIR9_protein||AT5G54600.2 | Symbols:  | 50S ribosomal protein L24, chloroplast
        (CL24) | chr5:22183046-22184403 FORWARD

          Length = 180

 Score =  184 bits (467), Expect = 3e-047
 Identities = 91/103 (88%), Positives = 97/103 (94%)
 Frame = +3

Query:  78 MATMSALQSSFTSLSITSNSSFLGQRLLSPIPLSVASPVKLVKNPCLVFAKLKRWERKKC 257
           MATMSALQSSFTSLS++ +SSFLGQRL+SPI LSV SPVK  +NPCLV AKLKRWERK+C
Sbjct:   1 MATMSALQSSFTSLSLSPSSSFLGQRLISPISLSVTSPVKPAENPCLVLAKLKRWERKEC 60

Query: 258 KPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTI 386
           KPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTI
Sbjct:  61 KPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTI 103


 Score =  77 bits (189), Expect = 6e-015
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +2

Query: 503 ERKEVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKQLKE 625
           + K+VVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWK LKE
Sbjct: 124 KEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKLLKE 164


 Score =  48 bits (113), Expect = 4e-006
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +3

Query: 444 PGQIVKIEAPIHSSNVMLYSKER 512
           PGQIVKIEAPIHSSNVMLYSKE+
Sbjct: 104 PGQIVKIEAPIHSSNVMLYSKEK 126

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0