BLASTX 7.6.2
Query= UN79742 /QuerySize=742
(741 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G43960.1 | Symbols: | nuclear transport facto... 269 1e-072
TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport facto... 166 2e-041
TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport facto... 111 6e-025
TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport facto... 110 1e-024
TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport facto... 110 1e-024
TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport facto... 83 2e-016
TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport facto... 77 8e-015
TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport facto... 75 5e-014
TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport facto... 68 6e-012
TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport facto... 66 2e-011
>TAIR9_protein||AT5G43960.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:17689154-17691653 REVERSE
Length = 451
Score = 269 bits (687), Expect = 1e-072
Identities = 134/170 (78%), Positives = 150/170 (88%), Gaps = 10/170 (5%)
Frame = +1
Query: 166 MATPYPGAMQVGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIRVDGDSSETADTLLNIHNM 345
MATPYPGA QVGSYFVGQYYQVLQ+QPDLIHQFYS+ S+AIR+DGDS+ETA++LL+IHNM
Sbjct: 1 MATPYPGATQVGSYFVGQYYQVLQQQPDLIHQFYSEPSRAIRIDGDSTETANSLLHIHNM 60
Query: 346 VMTLNFTAIEVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFVLN 525
VM+LNFTAIEVKTINSVESWEGGVLV VSGSVKTKEFS RRSF+QTFFLAPQEKGYFVL+
Sbjct: 61 VMSLNFTAIEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFVLS 120
Query: 526 DIFQFIDEGTVFYHQGD-------EAQLNPPNPHPEPEQPQVPDYVLEQE 654
D+F F+DEGTV+YHQ EAQLNPP HP+ PQV DYVLE+E
Sbjct: 121 DVFLFVDEGTVYYHQPSYLSEIKHEAQLNPPTRHPD---PQVSDYVLEEE 167
>TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:17689154-17691220 REVERSE
Length = 392
Score = 166 bits (418), Expect = 2e-041
Identities = 85/111 (76%), Positives = 93/111 (83%), Gaps = 10/111 (9%)
Frame = +1
Query: 343 MVMTLNFTAIEVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFVL 522
MVM+LNFTAIEVKTINSVESWEGGVLV VSGSVKTKEFS RRSF+QTFFLAPQEKGYFVL
Sbjct: 1 MVMSLNFTAIEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFVL 60
Query: 523 NDIFQFIDEGTVFYHQGD-------EAQLNPPNPHPEPEQPQVPDYVLEQE 654
+D+F F+DEGTV+YHQ EAQLNPP HP+ PQV DYVLE+E
Sbjct: 61 SDVFLFVDEGTVYYHQPSYLSEIKHEAQLNPPTRHPD---PQVSDYVLEEE 108
>TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:9157161-9159362 REVERSE
Length = 489
Score = 111 bits (276), Expect = 6e-025
Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 11/161 (6%)
Frame = +1
Query: 196 VGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIRVDGDS-SETADTLLNIHNMVMTLNFTAI 372
VG+ FV QYY +L + P+ +H+FY + SK R + + TL I +M L + I
Sbjct: 19 VGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEENGLMSITSTLQAIDKKIMALGYGVI 78
Query: 373 --EVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFVLNDIFQFID 546
E+ T+++ ES GG +V V+G + K+ SVRR+F QTFFLAPQE GYFVLND+F+FID
Sbjct: 79 SAEIATVDTQESHGGGYIVLVTGYLTGKD-SVRRTFSQTFFLAPQETGYFVLNDMFRFID 137
Query: 547 EGTVFYHQGDEAQLN----PPNPHPE-PEQPQVPDYVLEQE 654
EGTV + G++ +N P N + + ++PD ++++
Sbjct: 138 EGTVVH--GNQIPVNNVQAPVNTYQDTAAAKEIPDDFVQEK 176
>TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 460
Score = 110 bits (273), Expect = 1e-024
Identities = 59/133 (44%), Positives = 88/133 (66%), Gaps = 4/133 (3%)
Frame = +1
Query: 169 ATPYPGAMQVGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIRVDGDSS-ETADTLLNIHNM 345
A+P PGA VG FV QYY +L + P L+H+FY D+S R D + T T+ I++
Sbjct: 6 ASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQAINDK 65
Query: 346 VMTLNFT--AIEVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFV 519
+++L + E++T ++ ES E GV+V V+G + T +VR+ F Q+FFLAPQ+KGYFV
Sbjct: 66 ILSLKYEDYTAEIETADAQESHERGVIVLVTGRL-TGNDNVRKKFSQSFFLAPQDKGYFV 124
Query: 520 LNDIFQFIDEGTV 558
LND+F+F++E V
Sbjct: 125 LNDVFRFLEEKEV 137
>TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 461
Score = 110 bits (273), Expect = 1e-024
Identities = 59/133 (44%), Positives = 88/133 (66%), Gaps = 4/133 (3%)
Frame = +1
Query: 169 ATPYPGAMQVGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIRVDGDSS-ETADTLLNIHNM 345
A+P PGA VG FV QYY +L + P L+H+FY D+S R D + T T+ I++
Sbjct: 6 ASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQAINDK 65
Query: 346 VMTLNFT--AIEVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFV 519
+++L + E++T ++ ES E GV+V V+G + T +VR+ F Q+FFLAPQ+KGYFV
Sbjct: 66 ILSLKYEDYTAEIETADAQESHERGVIVLVTGRL-TGNDNVRKKFSQSFFLAPQDKGYFV 124
Query: 520 LNDIFQFIDEGTV 558
LND+F+F++E V
Sbjct: 125 LNDVFRFLEEKEV 137
>TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:19727279-19729533 FORWARD
Length = 459
Score = 83 bits (203), Expect = 2e-016
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Frame = +1
Query: 190 MQVGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIRVDGDS-SETADTLLNIHNMVMTLNF- 363
+ VGS FV QYY + P+ + +FY + S+ RV D T I + L +
Sbjct: 14 LTVGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTFQGISEELKRLTYG 73
Query: 364 --TAIEVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFVLNDIFQ 537
+ E+ + ++ ES GG L+ V+G E S RR F QTFFLAPQEKG+FVLNDI +
Sbjct: 74 DCNSAEITSYDTQESHNGGFLLFVTGYFTLNERS-RRKFTQTFFLAPQEKGFFVLNDILR 132
Query: 538 FIDE 549
F+++
Sbjct: 133 FVND 136
>TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:4710519-4712332 FORWARD
Length = 429
Score = 77 bits (189), Expect = 8e-015
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Frame = +1
Query: 196 VGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIRVDGDSS-ETADTLLNIHNMVMTLNF--T 366
+G+ FV +YY +L K P +HQFY D S R D + +L I+ +M+ ++ +
Sbjct: 15 IGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGSDGEMVSVKSLKAINEQIMSFDYEIS 74
Query: 367 AIEVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFVLNDIFQFID 546
I++ T +S S+ GV+ V+G + KE R F Q+FFL P YFVLND+F+++
Sbjct: 75 KIQILTADSQASYMNGVVTLVTGLLTVKE-GQRMRFSQSFFLVPLNGSYFVLNDVFRYVA 133
Query: 547 EGTV 558
+ V
Sbjct: 134 DEIV 137
>TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:2300579-2308305 REVERSE
Length = 1295
Score = 75 bits (182), Expect = 5e-014
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +1
Query: 196 VGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIRVDGDSSETADTLLNIHNMVMTLNFTAIE 375
VG F QYY LQ P+ +++ Y D S R D + TL +F +++
Sbjct: 281 VGDEFARQYYNTLQNAPENLYKLYKDKSTISRPGLDGTMRVFTLSKDLKWRSPGSFDSVK 340
Query: 376 VKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFVLNDIFQFID 546
+ ++ S +S + G+LV V G + E R F Q FFL PQEKGY V D+F+F+D
Sbjct: 341 ITSVTSQDSLKQGILVVVYGYLTFNERPARH-FTQVFFLVPQEKGYIVCTDMFRFVD 396
Score = 72 bits (174), Expect = 4e-013
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Frame = +1
Query: 196 VGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIRVDGDSSETADTLLNI---HNMVMTLNFT 366
+ ++F YY LQ P+++ +Y D SK R D + + TL +I +M+ F
Sbjct: 944 IAAFFSEHYYNNLQNSPEILPGYYKDVSKITRPGLDGTMRSSTLPDIIEDLDMLSPGGFD 1003
Query: 367 AIEVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFVLNDIFQFI 543
++EV ++ S +S + G+ VAV G E R+F Q F APQEKG FV D+F+F+
Sbjct: 1004 SVEVTSVMSQDSHDKGIRVAVDGYFTFNE-RPARNFTQNFTFAPQEKGLFVSTDMFKFV 1061
>TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 423
Score = 68 bits (164), Expect = 6e-012
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Frame = +1
Query: 196 VGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIR--VDGDSSETADTLLNIHNMVMTLNF-- 363
VG+ FV +YY L +H+FY + S R +DG+ T +L I++ +M++++
Sbjct: 15 VGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGE-IVTIKSLKGINDQIMSIDYKS 73
Query: 364 TAIEVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFVLNDIFQFI 543
+ IE+ T +S + + GV+ V+G V + RR F Q+FFL + YFVLND F+++
Sbjct: 74 SRIEILTADSQSTLKNGVVTLVTGLVIGND-GGRRKFSQSFFLVSRNGSYFVLNDTFRYV 132
Query: 544 DEGTVFYHQGDEA-QLNPPNPHPEPEQPQVPDYVLEQEQET 663
+ V E + N EP V ++ E +T
Sbjct: 133 SDEFVEPEATKEVEESQSTNAITEPANESVEAVIVPTEAKT 173
>TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 424
Score = 66 bits (160), Expect = 2e-011
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Frame = +1
Query: 196 VGSYFVGQYYQVLQKQPDLIHQFYSDTSKAIR--VDGDSSETADTLLNIHNMVMTLNF-- 363
VG+ FV +YY L +H+FY + S R +DG+ T +L I++ +M++++
Sbjct: 15 VGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGE-IVTIKSLKGINDQIMSIDYKS 73
Query: 364 TAIEVKTINSVESWEGGVLVAVSGSVKTKEFSVRRSFMQTFFLAPQEKGYFVLNDIFQFI 543
+ IE+ T +S + + GV+ V+G V + RR F Q+FFL + YFVLND F+++
Sbjct: 74 SRIEILTADSQSTLKNGVVTLVTGLVIGND-GGRRKFSQSFFLVSRNGSYFVLNDTFRYV 132
Query: 544 DE 549
+
Sbjct: 133 SD 134
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,252,145,367
Number of Sequences: 33410
Number of Extensions: 33252145367
Number of Successful Extensions: 1129160757
Number of sequences better than 0.0: 0
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