Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN80023


BLASTX 7.6.2

Query= UN80023 /QuerySize=459
        (458 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297814816|ref|XP_002875291.1| hypothetical protein ARALYDRAFT...    144   4e-033
gi|18404727|ref|NP_566784.1| uncharacterized protein [Arabidopsi...    131   2e-029
gi|225445424|ref|XP_002285038.1| PREDICTED: hypothetical protein...    111   3e-023
gi|255566927|ref|XP_002524446.1| conserved hypothetical protein ...    108   3e-022
gi|224122526|ref|XP_002330503.1| predicted protein [Populus tric...     99   1e-019
gi|224088059|ref|XP_002308310.1| predicted protein [Populus tric...     97   6e-019

>gi|297814816|ref|XP_002875291.1| hypothetical protein ARALYDRAFT_904770
        [Arabidopsis lyrata subsp. lyrata]

          Length = 377

 Score =  144 bits (361), Expect = 4e-033
 Identities = 86/119 (72%), Positives = 89/119 (74%), Gaps = 11/119 (9%)
 Frame = -2

Query: 457 FGGEERSSNDDGILSFDDGGWLTVFFLIRVFRPESSGGGSRSSSWFGTSRARSHIGVRRR 278
           FGGEER SNDDGIL   DG  LTV FLIRVFRPESSG  S SSSW G SRARS IG RRR
Sbjct: 260 FGGEER-SNDDGILF--DGSLLTVIFLIRVFRPESSGSRSSSSSWSGASRARSQIGGRRR 316

Query: 277 FSR---LWGESYEGDTGTSSRDRDEENNNQSFDEQEFS---RRRVRRRAFIADDDDEEE 119
             R   LWGESYEG+TGTSS  RDEENNNQS DEQE     RRR RRRA I DDDD++E
Sbjct: 317 PHRPPGLWGESYEGNTGTSS--RDEENNNQSSDEQESGTRRRRRSRRRAIIDDDDDDDE 373

>gi|18404727|ref|NP_566784.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 372

 Score =  131 bits (329), Expect = 2e-029
 Identities = 81/119 (68%), Positives = 86/119 (72%), Gaps = 12/119 (10%)
 Frame = -2

Query: 457 FGGEERSSNDDGILSFDDGGWLTVFFLIRVFRPESSGGGSRSSSWFGTSRARSHIGVRRR 278
           FGG+E  SNDDG L F D   LTV+FLIRVFRPESS  GSRSSSW GTSRAR+H   RRR
Sbjct: 261 FGGDE-ISNDDGFL-FADTRLLTVYFLIRVFRPESS--GSRSSSWSGTSRARTHTSGRRR 316

Query: 277 FSR---LWGESYEGDTGTSSRDRDEENNNQSFDEQEFS--RRRVRRRAFIADDDDEEEP 116
            SR   LWGESYEG+TGTS RD   E NNQS DEQ     RRR RRR  I DDD+EEEP
Sbjct: 317 SSRPASLWGESYEGNTGTSPRD---EENNQSSDEQVSGTRRRRSRRRTVIDDDDEEEEP 372

>gi|225445424|ref|XP_002285038.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 339

 Score =  111 bits (276), Expect = 3e-023
 Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 5/84 (5%)
 Frame = -2

Query: 451 GEERSSNDDGILSFDDGGWLTVFFLIRVFRPESSGGGSRSSSWFGTSRARSHIGVRRRFS 272
           GEER   DD IL  D+GGWLTVFFLIRVFRP SS   SRSSSW GTSRAR+ + +RRR +
Sbjct: 240 GEER--GDDSILPIDEGGWLTVFFLIRVFRPSSS---SRSSSWSGTSRARAQLTIRRRST 294

Query: 271 RLWGESYEGDTGTSSRDRDEENNN 200
           RLWGESYE ++G++SRD D E+++
Sbjct: 295 RLWGESYEAESGSASRDEDNESSD 318

>gi|255566927|ref|XP_002524446.1| conserved hypothetical protein [Ricinus
        communis]

          Length = 336

 Score =  108 bits (268), Expect = 3e-022
 Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 8/101 (7%)
 Frame = -2

Query: 451 GEERSSNDDGILSFDDGGWLTVFFLIRVFRPESSGGGSRSSSWFGTSRARSHIGVRRRFS 272
           GEER   +D +L  DDGGWLTVFFLIRVFRP   G   RSSSW GTSRAR  +  RRR +
Sbjct: 237 GEER--GEDSVLPIDDGGWLTVFFLIRVFRP---GSSPRSSSWSGTSRARGQVSFRRRST 291

Query: 271 RLWGESYEGDTGTSSRDRDEENNNQSFDEQEFSR-RRVRRR 152
           RLWGE+++G+TG+SS  RDEEN++       + R  R+RRR
Sbjct: 292 RLWGETHDGETGSSS--RDEENDSSDGGSGPWRRSERIRRR 330

>gi|224122526|ref|XP_002330503.1| predicted protein [Populus trichocarpa]

          Length = 336

 Score =  99 bits (245), Expect = 1e-019
 Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 9/100 (9%)
 Frame = -2

Query: 451 GEERSSNDDGILSFDDGGWLTVFFLIRVFRPESSGGGSRSSSWFGTSRARSHIGVRRRFS 272
           GEER     G    DDGGWLTVFFLIRVFRP   G   RSSSW GTSRAR+ +G RRR +
Sbjct: 240 GEER-----GDEPIDDGGWLTVFFLIRVFRP---GSSPRSSSWSGTSRARAPLGFRRRAT 291

Query: 271 RLWGESYEGDTGTSSRDRDEENNNQSFDEQEFSRRRVRRR 152
           R WGE++EG+TG+SSR+ D ++++        S  R+RRR
Sbjct: 292 RHWGENHEGETGSSSREDDNDSSDGGSGPWRRS-ERIRRR 330

>gi|224088059|ref|XP_002308310.1| predicted protein [Populus trichocarpa]

          Length = 337

 Score =  97 bits (239), Expect = 6e-019
 Identities = 57/99 (57%), Positives = 65/99 (65%), Gaps = 11/99 (11%)
 Frame = -2

Query: 451 GEERSSNDDGILSFDDGGWLTVFFLIRVFRPESSGGGSRSSSWFGTSRARSHIGVRRRFS 272
           GEER    D IL  DDGGWLTVFFLIRVFRP   G  SRSSSW G SR  + +G RRR  
Sbjct: 240 GEERG---DNILPIDDGGWLTVFFLIRVFRP---GSSSRSSSWSGASRV-AQLGFRRRAI 292

Query: 271 RLWGESYEGDTGTSSRDRDEENNNQSFDEQEFSRRRVRR 155
           R WGE++EG+TG+SSR    E++N S D     RRR  R
Sbjct: 293 RHWGENHEGETGSSSR----EDDNDSSDGGSGPRRRRER 327

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,178,980,611,991
Number of Sequences: 15229318
Number of Extensions: 1178980611991
Number of Successful Extensions: 310660920
Number of sequences better than 0.0: 0