BLASTX 7.6.2
Query= UN80342 /QuerySize=765
(764 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|46849975|gb|AAT02410.1| chloroplast omega-3 fatty acid desatu... 394 7e-108
gi|7378667|emb|CAB85467.1| chloroplast omega-3 fatty acid desatu... 368 7e-100
gi|239809231|gb|ACS26170.1| chloroplast fatty acid desaturase 7 ... 364 1e-098
gi|1345968|sp|P48618.1|FAD3C_BRANA RecName: Full=Omega-3 fatty a... 348 7e-094
gi|15239175|ref|NP_196177.1| omega-3 fatty acid desaturase (delt... 339 3e-091
gi|334187439|ref|NP_001190230.1| omega-3 fatty acid desaturase (... 339 3e-091
gi|17064784|gb|AAL32546.1| temperature-sensitive omega-3 fatty a... 335 4e-090
gi|229418590|gb|AAW78909.2| fatty acid desaturase [Brassica rapa... 335 4e-090
gi|297806575|ref|XP_002871171.1| hypothetical protein ARALYDRAFT... 335 5e-090
gi|239809233|gb|ACS26171.1| chloroplast fatty acid desaturase 8 ... 330 2e-088
gi|118430556|gb|ABK91881.1| omega-3 fatty acid desaturase [Descu... 328 8e-088
gi|5305298|gb|AAD41574.1|AF056562_1 unknown [Brassica oleracea] 322 4e-086
gi|239809235|gb|ACS26172.1| chloroplast fatty acid desaturase 8 ... 319 3e-085
gi|15229692|ref|NP_187727.1| omega-3 fatty acid desaturase [Arab... 315 5e-084
gi|297829670|ref|XP_002882717.1| hypothetical protein ARALYDRAFT... 314 9e-084
gi|118430554|gb|ABK91880.1| omega-3 fatty acid desaturase [Descu... 314 1e-083
gi|154813792|gb|ABS86961.1| chloroplast omega-3 fatty acid desat... 314 1e-083
gi|1345970|sp|P48620.1|FAD3C_SESIN RecName: Full=Omega-3 fatty a... 310 2e-082
gi|14488094|gb|AAK63867.1|AF389295_1 AT3g11170/F9F8_4 [Arabidops... 310 2e-082
gi|45385976|gb|AAS59833.1| chloroplast omega-3 desaturase [Malus... 306 3e-081
>gi|46849975|gb|AAT02410.1| chloroplast omega-3 fatty acid desaturase [Brassica
napus]
Length = 439
Score = 394 bits (1012), Expect = 7e-108
Identities = 191/214 (89%), Positives = 198/214 (92%), Gaps = 6/214 (2%)
Frame = +1
Query: 118 MASLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFRQPP--STLRFGLNSRNWALNVS 291
MA+LVLSECG+RPLPRIY TPRS+ LS TNKPTSFKFRQ P S+L LNSRNWALNVS
Sbjct: 1 MANLVLSECGVRPLPRIYATPRSSFLS-TNKPTSFKFRQSPSSSSLNLRLNSRNWALNVS 59
Query: 292 TPLTVD--SSPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVVRDV 465
TPLTVD SSPPIEEE PKTQRFDPGAPPPF+LADIRAAIPKHCWVKNPW SMSYVVRDV
Sbjct: 60 TPLTVDSSSSPPIEEE-PKTQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRDV 118
Query: 466 AIVFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGHLLH 645
AIVFALAAGAAYLN+WLVWPLYW AQG MFWALFVLG DCGHGSFSNDPRLNSVVGHLLH
Sbjct: 119 AIVFALAAGAAYLNNWLVWPLYWIAQGIMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLH 178
Query: 646 SSILVPYHGWRISHRTHHQNHGHVENDESWHPVS 747
SSILVPYHGWRISHRTHHQNHGHVENDESWHP+S
Sbjct: 179 SSILVPYHGWRISHRTHHQNHGHVENDESWHPMS 212
>gi|7378667|emb|CAB85467.1| chloroplast omega-3 fatty acid desaturase [Brassica
juncea]
Length = 429
Score = 368 bits (943), Expect = 7e-100
Identities = 174/205 (84%), Positives = 184/205 (89%), Gaps = 5/205 (2%)
Frame = +1
Query: 133 LSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFRQPPSTLRFGLNSRNWALNVSTPLTVDS 312
LSECGIRPLPRIYTTPRST LS T+FK + P+ G +++NWALNV+TPLTVDS
Sbjct: 6 LSECGIRPLPRIYTTPRSTFLS----NTTFKLKPSPAFRLNGFSTKNWALNVTTPLTVDS 61
Query: 313 SPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVVRDVAIVFALAAG 492
SPP EE +TQRFDPGAPPPF+LADIRAAIPKHCWVKNPW SMSYVVRDVAIVFALAAG
Sbjct: 62 SPPTSEE-HETQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRDVAIVFALAAG 120
Query: 493 AAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSSILVPYHG 672
AAYLNSWLVWPLYW AQGTMFWALFVLG DCGHGSFSNDPRLNSVVGHLLHSSILVPYHG
Sbjct: 121 AAYLNSWLVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHG 180
Query: 673 WRISHRTHHQNHGHVENDESWHPVS 747
WRISHRTHHQNHGHVENDESWHP+S
Sbjct: 181 WRISHRTHHQNHGHVENDESWHPMS 205
>gi|239809231|gb|ACS26170.1| chloroplast fatty acid desaturase 7 [Brassica
napus]
Length = 432
Score = 364 bits (933), Expect = 1e-098
Identities = 172/205 (83%), Positives = 183/205 (89%), Gaps = 5/205 (2%)
Frame = +1
Query: 133 LSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFRQPPSTLRFGLNSRNWALNVSTPLTVDS 312
LSECGIRPLPRIYTTPRST LS T+FK + P+ G +++NWALNV+TPLTVDS
Sbjct: 6 LSECGIRPLPRIYTTPRSTFLS----NTTFKLKPSPAFRLNGFSTKNWALNVTTPLTVDS 61
Query: 313 SPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVVRDVAIVFALAAG 492
SPP EE +TQRFDPGAPPPF+LADIRAAIPKHCWVKNPW SMSYVVRDVAIVFALAAG
Sbjct: 62 SPPTSEE-HETQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRDVAIVFALAAG 120
Query: 493 AAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSSILVPYHG 672
AAYLN+WLVWPLYW AQGTMFWALFVLG DCGHGSFSNDPRLNSVVGHLLHSSILVPYHG
Sbjct: 121 AAYLNNWLVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHG 180
Query: 673 WRISHRTHHQNHGHVENDESWHPVS 747
WRISHRTHHQNHGHVEND SWHP+S
Sbjct: 181 WRISHRTHHQNHGHVENDVSWHPMS 205
>gi|1345968|sp|P48618.1|FAD3C_BRANA RecName: Full=Omega-3 fatty acid desaturase,
chloroplastic; Flags: Precursor
Length = 404
Score = 348 bits (891), Expect = 7e-094
Identities = 162/178 (91%), Positives = 169/178 (94%), Gaps = 3/178 (1%)
Frame = +1
Query: 220 FKFRQPPSTLRFGLNSRNWALNVSTPLTVD--SSPPIEEEPPKTQRFDPGAPPPFSLADI 393
FKFRQ PS+ RF LNSRNWALNV+TPLTVD SSPPIEEE PKTQRFDPGAPPPF+LADI
Sbjct: 1 FKFRQSPSSPRFRLNSRNWALNVTTPLTVDSSSSPPIEEE-PKTQRFDPGAPPPFNLADI 59
Query: 394 RAAIPKHCWVKNPWISMSYVVRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVL 573
RAAIPKHCWVKNPW SMSYVVR++AIVFALAAGAAYLN+WLVWPLYW AQGTMFWALFVL
Sbjct: 60 RAAIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVL 119
Query: 574 GRDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVS 747
G DCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+S
Sbjct: 120 GHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMS 177
>gi|15239175|ref|NP_196177.1| omega-3 fatty acid desaturase (delta-15
desaturase) [Arabidopsis thaliana]
Length = 435
Score = 339 bits (868), Expect = 3e-091
Identities = 165/217 (76%), Positives = 179/217 (82%), Gaps = 14/217 (6%)
Frame = +1
Query: 118 MASLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFR---QPPSTL---RFGLNS--RN 273
MAS VLSECG RPLPR Y P+ T +N +FKF +PPS+L R+G S RN
Sbjct: 1 MASSVLSECGFRPLPRFY--PKHTTSFASNPKPTFKFNPPLKPPSSLLNSRYGFYSKTRN 58
Query: 274 WALNVSTPLTVDSSPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYV 453
WALNV+TPLT SP E+ T+RFDPGAPPPF+LADIRAAIPKHCWVKNPW+SMSYV
Sbjct: 59 WALNVATPLTTLQSPSEED----TERFDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYV 114
Query: 454 VRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVG 633
VRDVAIVF LAA AAY N+WL+WPLYWFAQGTMFWALFVLG DCGHGSFSNDPRLNSV G
Sbjct: 115 VRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAG 174
Query: 634 HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPV 744
HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+
Sbjct: 175 HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL 211
>gi|334187439|ref|NP_001190230.1| omega-3 fatty acid desaturase (delta-15
desaturase) [Arabidopsis thaliana]
Length = 382
Score = 339 bits (868), Expect = 3e-091
Identities = 165/217 (76%), Positives = 179/217 (82%), Gaps = 14/217 (6%)
Frame = +1
Query: 118 MASLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFR---QPPSTL---RFGLNS--RN 273
MAS VLSECG RPLPR Y P+ T +N +FKF +PPS+L R+G S RN
Sbjct: 1 MASSVLSECGFRPLPRFY--PKHTTSFASNPKPTFKFNPPLKPPSSLLNSRYGFYSKTRN 58
Query: 274 WALNVSTPLTVDSSPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYV 453
WALNV+TPLT SP E+ T+RFDPGAPPPF+LADIRAAIPKHCWVKNPW+SMSYV
Sbjct: 59 WALNVATPLTTLQSPSEED----TERFDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYV 114
Query: 454 VRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVG 633
VRDVAIVF LAA AAY N+WL+WPLYWFAQGTMFWALFVLG DCGHGSFSNDPRLNSV G
Sbjct: 115 VRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAG 174
Query: 634 HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPV 744
HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+
Sbjct: 175 HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL 211
>gi|17064784|gb|AAL32546.1| temperature-sensitive omega-3 fatty acid desaturase,
chloroplast precursor [Arabidopsis thaliana]
Length = 435
Score = 335 bits (859), Expect = 4e-090
Identities = 164/217 (75%), Positives = 178/217 (82%), Gaps = 14/217 (6%)
Frame = +1
Query: 118 MASLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFR---QPPSTL---RFGLNS--RN 273
MAS VLSECG RPLPR Y P+ T +N +FKF +PPS+L R+G S RN
Sbjct: 1 MASSVLSECGFRPLPRFY--PKHTTSFASNPKPTFKFNPPLKPPSSLLNSRYGFYSKTRN 58
Query: 274 WALNVSTPLTVDSSPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYV 453
WALNV+TPLT SP E+ T+RFDP APPPF+LADIRAAIPKHCWVKNPW+SMSYV
Sbjct: 59 WALNVATPLTTLQSPSEED----TERFDPVAPPPFNLADIRAAIPKHCWVKNPWMSMSYV 114
Query: 454 VRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVG 633
VRDVAIVF LAA AAY N+WL+WPLYWFAQGTMFWALFVLG DCGHGSFSNDPRLNSV G
Sbjct: 115 VRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAG 174
Query: 634 HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPV 744
HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+
Sbjct: 175 HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL 211
>gi|229418590|gb|AAW78909.2| fatty acid desaturase [Brassica rapa subsp.
pekinensis]
Length = 432
Score = 335 bits (859), Expect = 4e-090
Identities = 160/211 (75%), Positives = 172/211 (81%), Gaps = 9/211 (4%)
Frame = +1
Query: 124 SLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFRQPPSTLR----FGLNSRNWALNVS 291
S VLS+CGIRPLPR Y P + S+ + P+ PPS+L F +RNWALNV+
Sbjct: 3 SCVLSKCGIRPLPRFYPKPTN---SFASNPSPTLKLNPPSSLNSRSVFLARTRNWALNVA 59
Query: 292 TPLTVDSSPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVVRDVAI 471
TPLT +PP EEE RFDPGAPPPF+LADIRAAIPKHCWVKNPW SMSYVVRDVAI
Sbjct: 60 TPLTTLETPPEEEE--DASRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRDVAI 117
Query: 472 VFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSS 651
VF LAA AAY NSWL+WPLYWFAQGTMFWALFVLG DCGHGSFSNDPRLNSV GHLLHSS
Sbjct: 118 VFGLAAVAAYFNSWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSS 177
Query: 652 ILVPYHGWRISHRTHHQNHGHVENDESWHPV 744
ILVPYHGWRISHRTHHQNHGHVENDESWHP+
Sbjct: 178 ILVPYHGWRISHRTHHQNHGHVENDESWHPL 208
>gi|297806575|ref|XP_002871171.1| hypothetical protein ARALYDRAFT_487353
[Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 335 bits (858), Expect = 5e-090
Identities = 161/217 (74%), Positives = 174/217 (80%), Gaps = 14/217 (6%)
Frame = +1
Query: 118 MASLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFRQPPSTLRFGLNSR--------N 273
MAS +LSECGIRPLPR Y P +T + KPT FKF P LNSR +
Sbjct: 1 MASSILSECGIRPLPRFYPKP-TTSFASNPKPT-FKFNPPVKPASSSLNSRDGFYSKTMH 58
Query: 274 WALNVSTPLTVDSSPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYV 453
WALNV+TPLT SP E+ T RFDPGAPPPF+LADIRAAIPKHCW+KNPW+SMSYV
Sbjct: 59 WALNVATPLTTLQSPSEED----TDRFDPGAPPPFNLADIRAAIPKHCWIKNPWMSMSYV 114
Query: 454 VRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVG 633
VRDVA+VF LAA AAY N+WL+WPLYWFAQGTMFWALFVLG DCGHGSFSNDPRLNSV G
Sbjct: 115 VRDVAVVFGLAALAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAG 174
Query: 634 HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPV 744
HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+
Sbjct: 175 HLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL 211
>gi|239809233|gb|ACS26171.1| chloroplast fatty acid desaturase 8 [Brassica
napus]
Length = 432
Score = 330 bits (845), Expect = 2e-088
Identities = 157/211 (74%), Positives = 169/211 (80%), Gaps = 9/211 (4%)
Frame = +1
Query: 124 SLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFRQPPSTLR----FGLNSRNWALNVS 291
S VLS+CGIRPLPR Y P + S+ + P+ PPS+L F +RNWALNV+
Sbjct: 3 SCVLSKCGIRPLPRFYPKPTN---SFASNPSPTLKLNPPSSLNSRSVFLARTRNWALNVA 59
Query: 292 TPLTVDSSPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVVRDVAI 471
PLT +PP EE RFDPGAPPPF+LADIRAAIPKHCWVKNPW SMSYVVRDV I
Sbjct: 60 IPLTTLETPP--EEEKDASRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRDVVI 117
Query: 472 VFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSS 651
VF LAA AAY NSWL+WPLYWFAQGTMFWALFVLG DCGHGSFSNDPRLNSV GHLLHSS
Sbjct: 118 VFGLAAVAAYFNSWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSS 177
Query: 652 ILVPYHGWRISHRTHHQNHGHVENDESWHPV 744
ILVPYHGWRISHRTHHQNHGHVENDESWHP+
Sbjct: 178 ILVPYHGWRISHRTHHQNHGHVENDESWHPL 208
>gi|118430556|gb|ABK91881.1| omega-3 fatty acid desaturase [Descurainia sophia]
Length = 433
Score = 328 bits (839), Expect = 8e-088
Identities = 160/218 (73%), Positives = 173/218 (79%), Gaps = 16/218 (7%)
Frame = +1
Query: 118 MASLVLSECGIRPLPRIYTTPRSTPLSYTNKPT-SFKFRQPPSTLRFGLNSR-------- 270
MAS VLSECGIRPLPR Y P + S+ + PT +FKF ++L LNSR
Sbjct: 1 MASWVLSECGIRPLPRFYPKPIA---SFASNPTPTFKFNPTVTSLSSSLNSRDNFFVKTK 57
Query: 271 NWALNVSTPLTVDSSPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSY 450
NWALNV+TPLT SP E T+RFDPGAPPPF+LADIRAAIPKHCWVKNPW S+SY
Sbjct: 58 NWALNVATPLTTFQSPSEEH----TERFDPGAPPPFNLADIRAAIPKHCWVKNPWRSVSY 113
Query: 451 VVRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVV 630
VVRDVAIVF LAA AAY N+WL+WPLYWFAQGTMFWALFVLG CGHG FSND RLNSV
Sbjct: 114 VVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHGCGHGGFSNDSRLNSVA 173
Query: 631 GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPV 744
GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+
Sbjct: 174 GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL 211
>gi|5305298|gb|AAD41574.1|AF056562_1 unknown [Brassica oleracea]
Length = 169
Score = 322 bits (824), Expect = 4e-086
Identities = 155/170 (91%), Positives = 158/170 (92%), Gaps = 5/170 (2%)
Frame = +1
Query: 214 TSFKFRQPP--STLRFGLNSRNWALNVSTPLTVD--SSPPIEEEPPKTQRFDPGAPPPFS 381
TSFKFRQ P S+L LNSRNWALNVSTPLTVD SSPPIEEE PKTQRFDPGAPPPF+
Sbjct: 1 TSFKFRQSPSSSSLNLRLNSRNWALNVSTPLTVDSSSSPPIEEE-PKTQRFDPGAPPPFN 59
Query: 382 LADIRAAIPKHCWVKNPWISMSYVVRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTMFWA 561
LADIRAAIPKHCWVKNPW SMSYVVRDVAIVFALAAGAAYLN+WLVWPLYW AQGTMFWA
Sbjct: 60 LADIRAAIPKHCWVKNPWKSMSYVVRDVAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWA 119
Query: 562 LFVLGRDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 711
LFVLG DCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG
Sbjct: 120 LFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 169
>gi|239809235|gb|ACS26172.1| chloroplast fatty acid desaturase 8 [Brassica
napus]
Length = 432
Score = 319 bits (817), Expect = 3e-085
Identities = 155/211 (73%), Positives = 167/211 (79%), Gaps = 9/211 (4%)
Frame = +1
Query: 124 SLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFRQPPSTLR----FGLNSRNWALNVS 291
S VLS+CGIRPLPR Y P + S+ + P+ P +L F +RNWALNV+
Sbjct: 3 SCVLSKCGIRPLPRFYPKPTN---SFASNPSPTLKLNPLHSLNSRSVFLPRTRNWALNVA 59
Query: 292 TPLTVDSSPPIEEEPPKTQRFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVVRDVAI 471
TPLT +PP EEE RFD GAPPPF+LADIRAAIPKHCWVKNPW SMSYVV DVAI
Sbjct: 60 TPLTTLETPPEEEE--DASRFDLGAPPPFNLADIRAAIPKHCWVKNPWRSMSYVVGDVAI 117
Query: 472 VFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSS 651
VF LAA AAY NSWL+WPLYWFAQGTM WALFVLG DCGHGSFSNDPRLNSV GHLLHSS
Sbjct: 118 VFGLAAVAAYFNSWLLWPLYWFAQGTMSWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSS 177
Query: 652 ILVPYHGWRISHRTHHQNHGHVENDESWHPV 744
ILVPYHGWRISHRTHHQNHGHVENDESWHP+
Sbjct: 178 ILVPYHGWRISHRTHHQNHGHVENDESWHPL 208
>gi|15229692|ref|NP_187727.1| omega-3 fatty acid desaturase [Arabidopsis
thaliana]
Length = 446
Score = 315 bits (806), Expect = 5e-084
Identities = 148/185 (80%), Positives = 160/185 (86%), Gaps = 9/185 (4%)
Frame = +1
Query: 214 TSFKFRQPPSTLRFGLNS-----RNWALNVSTPLT--VDSSPPIEEEPPKTQRFDPGAPP 372
+S ++ S L FGLNS RNWALNVSTPLT + P+EE+ QRFDPGAPP
Sbjct: 37 SSSSYKTSSSPLSFGLNSRDGFTRNWALNVSTPLTTPIFEESPLEED--NKQRFDPGAPP 94
Query: 373 PFSLADIRAAIPKHCWVKNPWISMSYVVRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTM 552
PF+LADIRAAIPKHCWVKNPW S+SYVVRDVAIVFALAAGAAYLN+W+VWPLYW AQGTM
Sbjct: 95 PFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTM 154
Query: 553 FWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDES 732
FWALFVLG DCGHGSFSNDP+LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDES
Sbjct: 155 FWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDES 214
Query: 733 WHPVS 747
WHP+S
Sbjct: 215 WHPMS 219
>gi|297829670|ref|XP_002882717.1| hypothetical protein ARALYDRAFT_478456
[Arabidopsis lyrata subsp. lyrata]
Length = 446
Score = 314 bits (804), Expect = 9e-084
Identities = 151/193 (78%), Positives = 162/193 (83%), Gaps = 10/193 (5%)
Frame = +1
Query: 181 RSTPLSY-TNKPTSFKFRQPPSTLRFGLNSRNWALNVSTPLTV---DSSPPIEEEPPKTQ 348
R +P SY T+ P +F+ R G +RNWALNVSTPLT + SP EE Q
Sbjct: 33 RPSPSSYKTSSPLAFRLNS-----RDGF-TRNWALNVSTPLTTPIFEESPLEEEYKDNKQ 86
Query: 349 RFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVVRDVAIVFALAAGAAYLNSWLVWPL 528
RFDPGAPPPF+LADIRAAIPKHCWVKNPW S+SYVVRDVAIVFALAAGAAYLN+W+VWPL
Sbjct: 87 RFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPL 146
Query: 529 YWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNH 708
YW AQGTMFWALFVLG DCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNH
Sbjct: 147 YWLAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNH 206
Query: 709 GHVENDESWHPVS 747
GHVENDESWHP+S
Sbjct: 207 GHVENDESWHPMS 219
>gi|118430554|gb|ABK91880.1| omega-3 fatty acid desaturase [Descurainia sophia]
Length = 449
Score = 314 bits (803), Expect = 1e-083
Identities = 148/192 (77%), Positives = 158/192 (82%), Gaps = 7/192 (3%)
Frame = +1
Query: 178 PRSTPLSYTNKPTSFKFRQPPSTLRFGLNSRNWALNVSTPLT--VDSSPPIEEEPPKTQR 351
P S+ S K +F+ R G ++NW LNVSTPLT + P+EEE TQR
Sbjct: 36 PSSSSSSSNTKSLAFRLNS-----RNGFFAKNWGLNVSTPLTTPIVEESPLEEEHEDTQR 90
Query: 352 FDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVVRDVAIVFALAAGAAYLNSWLVWPLY 531
FDPGA PPF+LADIRAAIPKHCWVKNPW SMSYVVRDV IVFALAAGAAYLN+WLVWPLY
Sbjct: 91 FDPGARPPFNLADIRAAIPKHCWVKNPWKSMSYVVRDVTIVFALAAGAAYLNNWLVWPLY 150
Query: 532 WFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 711
W AQGTMFWALFVLG DCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG
Sbjct: 151 WLAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 210
Query: 712 HVENDESWHPVS 747
HVENDESWHP+S
Sbjct: 211 HVENDESWHPMS 222
>gi|154813792|gb|ABS86961.1| chloroplast omega-3 fatty acid desaturase
[Descurainia sophia]
Length = 451
Score = 314 bits (803), Expect = 1e-083
Identities = 150/192 (78%), Positives = 159/192 (82%), Gaps = 5/192 (2%)
Frame = +1
Query: 178 PRSTPLSYTNKPTSFKFRQPPSTLRFGLNSRNWALNVSTPLT--VDSSPPIEEEPPKTQR 351
P S+ S + S FR T R G ++NW LNVSTPLT + P+EEE TQR
Sbjct: 36 PSSSSSSSSPNTKSLAFR---LTSRNGFFTKNWGLNVSTPLTTPIVEESPLEEEHEDTQR 92
Query: 352 FDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVVRDVAIVFALAAGAAYLNSWLVWPLY 531
FDPGA PPF+LADIRAAIPKHCWVKNPW SMSYVVRDVAIVFALAA AAYLN+WLVWPLY
Sbjct: 93 FDPGARPPFNLADIRAAIPKHCWVKNPWKSMSYVVRDVAIVFALAAAAAYLNNWLVWPLY 152
Query: 532 WFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 711
W AQGTMFWALFVLG DCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG
Sbjct: 153 WLAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 212
Query: 712 HVENDESWHPVS 747
HVENDESWHP+S
Sbjct: 213 HVENDESWHPMS 224
>gi|1345970|sp|P48620.1|FAD3C_SESIN RecName: Full=Omega-3 fatty acid desaturase,
chloroplastic; Flags: Precursor
Length = 447
Score = 310 bits (792), Expect = 2e-082
Identities = 151/224 (67%), Positives = 168/224 (75%), Gaps = 15/224 (6%)
Frame = +1
Query: 118 MASLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFKFRQ------PPSTLRFG-LNSRNW 276
MAS VLSECG+RPLPR+Y PR+ + PT +F + L G L +NW
Sbjct: 1 MASWVLSECGLRPLPRVYPKPRTGHPLLNSNPTKLRFSRTDLGNGSSFCLSSGILREKNW 60
Query: 277 ALNVSTPLTVDSSPPIEEEPPKTQR-------FDPGAPPPFSLADIRAAIPKHCWVKNPW 435
AL VS PL V EEE + +R FDPGAPPPF L+DIR AIPKHCWVK+PW
Sbjct: 61 ALRVSAPLRV-LQVEEEEENKEGERVINGGEEFDPGAPPPFKLSDIREAIPKHCWVKDPW 119
Query: 436 ISMSYVVRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPR 615
SM YVVRDVA+VF LAA AAY N+W+VWPLYWFAQ TMFWALFVLG DCGHGSFSNDP+
Sbjct: 120 RSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNDPK 179
Query: 616 LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVS 747
LNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+S
Sbjct: 180 LNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLS 223
>gi|14488094|gb|AAK63867.1|AF389295_1 AT3g11170/F9F8_4 [Arabidopsis thaliana]
Length = 446
Score = 310 bits (792), Expect = 2e-082
Identities = 147/185 (79%), Positives = 159/185 (85%), Gaps = 9/185 (4%)
Frame = +1
Query: 214 TSFKFRQPPSTLRFGLNS-----RNWALNVSTPLT--VDSSPPIEEEPPKTQRFDPGAPP 372
+S ++ S L FGLNS RNWALNVSTPLT + P+EE+ QRFDPGAPP
Sbjct: 37 SSSSYKTSSSPLSFGLNSRDGFTRNWALNVSTPLTTPIFEESPLEED--NKQRFDPGAPP 94
Query: 373 PFSLADIRAAIPKHCWVKNPWISMSYVVRDVAIVFALAAGAAYLNSWLVWPLYWFAQGTM 552
PF+LADIRAAIPKHCWVKNPW S+SYVVRDVAIVFALAAGAAYLN+W+VWPLYW AQGTM
Sbjct: 95 PFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTM 154
Query: 553 FWALFVLGRDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDES 732
FWALFVLG DCGHGSFSNDP+LNSVVGHLLHSSILVPYHG RISHRTHHQNHGHVENDES
Sbjct: 155 FWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGRRISHRTHHQNHGHVENDES 214
Query: 733 WHPVS 747
WHP+S
Sbjct: 215 WHPMS 219
>gi|45385976|gb|AAS59833.1| chloroplast omega-3 desaturase [Malus x domestica]
Length = 439
Score = 306 bits (782), Expect = 3e-081
Identities = 145/216 (67%), Positives = 166/216 (76%), Gaps = 10/216 (4%)
Frame = +1
Query: 118 MASLVLSECGIRPLPRIYTTPRSTPLSYTNKPTSFK-FRQPPSTLRFGLNSRNWALNVST 294
MA+ VLSEC ++PLP+ Y+ PR+ + +KP++ + F ST G W+LNVS
Sbjct: 1 MATWVLSECTLKPLPKFYSHPRN---ALPSKPSTLRPFPNVRSTNLLGFRGAKWSLNVSA 57
Query: 295 PLTVDSSPPIEEEPPKTQ------RFDPGAPPPFSLADIRAAIPKHCWVKNPWISMSYVV 456
PL V S + T FDPGAPPPF L DIRAAIPKHCWVK+PW SMSYVV
Sbjct: 58 PLRVPSVDGEDNGKVSTNGVGDGGEFDPGAPPPFKLGDIRAAIPKHCWVKDPWKSMSYVV 117
Query: 457 RDVAIVFALAAGAAYLNSWLVWPLYWFAQGTMFWALFVLGRDCGHGSFSNDPRLNSVVGH 636
RDVA+VF +AA A+YLN+W VWPLYWFAQGTMFWALFVLG DCGHGSFSN+P+LNSVVGH
Sbjct: 118 RDVAVVFGMAALASYLNNWAVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGH 177
Query: 637 LLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPV 744
LLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+
Sbjct: 178 LLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL 213
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,178,980,611,991
Number of Sequences: 15229318
Number of Extensions: 1178980611991
Number of Successful Extensions: 310660920
Number of sequences better than 0.0: 0
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